RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 NISCHQ9Y2I1 1504 aa44.04■■■■■ 4.64
RER1-206ENST00000462129 ABCC9O60706 1549 aa40.18■■■■■ 4.02
RER1-206ENST00000462129 CCDC180Q9P1Z9 1646 aa39.71■■■■□ 3.95
RER1-206ENST00000462129 DNAJC5BQ9UF47 199 aa38.03■■■■□ 3.68
RER1-206ENST00000462129 RB1CC1Q8TDY2 1594 aa38.02■■■■□ 3.68
RER1-206ENST00000462129 NACADO15069 1562 aa37.63■■■■□ 3.62
RER1-206ENST00000462129 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
RER1-206ENST00000462129 PABPN1Q86U42 306 aaKnown RBP eCLIP37.33■■■■□ 3.57
RER1-206ENST00000462129 UNC13AQ9UPW8 1703 aa37.15■■■■□ 3.54
RER1-206ENST00000462129 MYO15BQ96JP2 1530 aa36.94■■■■□ 3.5
RER1-206ENST00000462129 BICRAQ9NZM4 1560 aa36.92■■■■□ 3.5
RER1-206ENST00000462129 ZCCHC6Q5VYS8 1495 aaKnown RBP36.42■■■■□ 3.42
RER1-206ENST00000462129 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
RER1-206ENST00000462129 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
RER1-206ENST00000462129 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.39
RER1-206ENST00000462129 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
RER1-206ENST00000462129 SCRIBQ14160 1630 aa36.22■■■■□ 3.39
RER1-206ENST00000462129 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.37
RER1-206ENST00000462129 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
RER1-206ENST00000462129 CUX2O14529 1486 aa34.79■■■■□ 3.16
RER1-206ENST00000462129 ERCC6Q03468 1493 aa34.75■■■■□ 3.15
RER1-206ENST00000462129 NCAPD3P42695 1498 aa34.73■■■■□ 3.15
RER1-206ENST00000462129 ATAD2BQ9ULI0 1458 aa34.59■■■■□ 3.13
RER1-206ENST00000462129 SMARCA2P51531 1590 aa34.49■■■■□ 3.11
RER1-206ENST00000462129 HMGXB3Q12766 1538 aa34.47■■■■□ 3.11
RER1-206ENST00000462129 SMARCA4P51532 1647 aa34.46■■■■□ 3.11
RER1-206ENST00000462129 NESP48681 1621 aa34.38■■■■□ 3.09
RER1-206ENST00000462129 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
RER1-206ENST00000462129 BAZ1AQ9NRL2 1556 aaPredicted RBP34.22■■■■□ 3.07
RER1-206ENST00000462129 THOC2Q8NI27 1593 aaKnown RBP34.13■■■■□ 3.05
RER1-206ENST00000462129 PEG3Q9GZU2 1588 aa34.1■■■■□ 3.05
RER1-206ENST00000462129 LAMC3Q9Y6N6 1575 aa34.05■■■■□ 3.04
RER1-206ENST00000462129 MROH2BQ7Z745 1585 aa33.94■■■■□ 3.02
RER1-206ENST00000462129 KIF21AQ7Z4S6 1674 aa33.93■■■■□ 3.02
RER1-206ENST00000462129 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
RER1-206ENST00000462129 CADPSQ9ULU8 1353 aa33.67■■■□□ 2.98
RER1-206ENST00000462129 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
RER1-206ENST00000462129 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
RER1-206ENST00000462129 WDR62O43379 1518 aa33.55■■■□□ 2.96
RER1-206ENST00000462129 WIZO95785 1651 aa33.52■■■□□ 2.96
RER1-206ENST00000462129 CEP164Q9UPV0 1460 aa33.42■■■□□ 2.94
RER1-206ENST00000462129 FANCD2Q9BXW9 1451 aa33.32■■■□□ 2.92
RER1-206ENST00000462129 CFTRP13569 1480 aa33.2■■■□□ 2.91
RER1-206ENST00000462129 OSCARQ8IYS5 282 aa33.1■■■□□ 2.89
RER1-206ENST00000462129 URB2Q14146 1524 aaKnown RBP33.08■■■□□ 2.89
RER1-206ENST00000462129 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.89
RER1-206ENST00000462129 RSF1Q96T23 1441 aaPredicted RBP33.06■■■□□ 2.88
RER1-206ENST00000462129 PRDM2Q13029 1718 aa32.84■■■□□ 2.85
RER1-206ENST00000462129 RIMBP3CA6NJZ7 1639 aa32.77■■■□□ 2.84
RER1-206ENST00000462129 RIMBP3BA6NNM3 1639 aa32.77■■■□□ 2.84
RER1-206ENST00000462129 RIMBP3Q9UFD9 1639 aa32.77■■■□□ 2.84
RER1-206ENST00000462129 IFT140Q96RY7 1462 aa32.75■■■□□ 2.83
RER1-206ENST00000462129 ZNF608Q9ULD9 1512 aaPredicted RBP32.75■■■□□ 2.83
RER1-206ENST00000462129 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
RER1-206ENST00000462129 TOPBP1Q92547 1522 aa32.64■■■□□ 2.82
RER1-206ENST00000462129 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
RER1-206ENST00000462129 EIF4G3O43432 1585 aaKnown RBP32.56■■■□□ 2.8
RER1-206ENST00000462129 ABCC8Q09428 1581 aa32.5■■■□□ 2.79
RER1-206ENST00000462129 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
RER1-206ENST00000462129 CYB5RLQ6IPT4 315 aa32.39■■■□□ 2.78
RER1-206ENST00000462129 CHD1O14646 1710 aa32.39■■■□□ 2.78
RER1-206ENST00000462129 AQRO60306 1485 aaKnown RBP eCLIP32.38■■■□□ 2.772e-6■■■□□ 15.2
RER1-206ENST00000462129 TARBP1Q13395 1621 aaKnown RBP32.37■■■□□ 2.77
RER1-206ENST00000462129 POLA1P09884 1462 aaPredicted RBP32.29■■■□□ 2.76
RER1-206ENST00000462129 FBLN2P98095 1184 aa32.28■■■□□ 2.76
RER1-206ENST00000462129 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
RER1-206ENST00000462129 TRHP20396 242 aaPredicted RBP32.2■■■□□ 2.75
RER1-206ENST00000462129 RAD54L2Q9Y4B4 1467 aa32.18■■■□□ 2.74
RER1-206ENST00000462129 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
RER1-206ENST00000462129 SOGA1O94964 1423 aa32.1■■■□□ 2.73
RER1-206ENST00000462129 SUPT5HO00267 1087 aaKnown RBP32.08■■■□□ 2.73
RER1-206ENST00000462129 SNAPC4Q5SXM2 1469 aa32.08■■■□□ 2.73
RER1-206ENST00000462129 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
RER1-206ENST00000462129 WDR97A6NE52 1622 aa32■■■□□ 2.71
RER1-206ENST00000462129 CLASP1Q7Z460 1538 aa32■■■□□ 2.71
RER1-206ENST00000462129 SYNJ1O43426 1573 aa31.95■■■□□ 2.71
RER1-206ENST00000462129 CHMP7Q8WUX9 453 aaPredicted RBP31.95■■■□□ 2.71
RER1-206ENST00000462129 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
RER1-206ENST00000462129 CUX1P39880 1505 aa31.92■■■□□ 2.7
RER1-206ENST00000462129 GRIN2BQ13224 1484 aa31.9■■■□□ 2.7
RER1-206ENST00000462129 SYNJ2O15056 1496 aa31.84■■■□□ 2.69
RER1-206ENST00000462129 PBRM1Q86U86 1689 aa31.76■■■□□ 2.67
RER1-206ENST00000462129 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
RER1-206ENST00000462129 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
RER1-206ENST00000462129 ABCA5Q8WWZ7 1642 aa31.62■■■□□ 2.65
RER1-206ENST00000462129 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
RER1-206ENST00000462129 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
RER1-206ENST00000462129 ERCC6L2Q5T890 1561 aa31.48■■■□□ 2.63
RER1-206ENST00000462129 ADAMTS12P58397 1594 aa31.44■■■□□ 2.62
RER1-206ENST00000462129 CEP170Q5SW79 1584 aa31.41■■■□□ 2.62
RER1-206ENST00000462129 WRNQ14191 1432 aaPredicted RBP eCLIP31.4■■■□□ 2.62
RER1-206ENST00000462129 NUP160Q12769 1436 aa31.39■■■□□ 2.62
RER1-206ENST00000462129 FHAD1B1AJZ9 1412 aa31.31■■■□□ 2.6
RER1-206ENST00000462129 SHROOM2Q13796 1616 aa31.29■■■□□ 2.6
RER1-206ENST00000462129 BIVM-ERCC5R4GMW8 1640 aa31.28■■■□□ 2.6
RER1-206ENST00000462129 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
RER1-206ENST00000462129 ERICH3Q5RHP9 1530 aa31.21■■■□□ 2.59
RER1-206ENST00000462129 PRG4Q92954 1404 aaPredicted RBP31.14■■■□□ 2.58
RER1-206ENST00000462129 KIF13AQ9H1H9 1805 aa31.12■■■□□ 2.57
RER1-206ENST00000462129 JPH4Q96JJ6 628 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms