RNA–Protein interactions for RNA: ENST00000520177.5

G3BP1-208, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 1 (best)

Gene G3BP1, Length 2,700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-208ENST00000520177 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
G3BP1-208ENST00000520177 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
G3BP1-208ENST00000520177 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
G3BP1-208ENST00000520177 HRCP23327 699 aa24.98■■□□□ 1.59
G3BP1-208ENST00000520177 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
G3BP1-208ENST00000520177 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
G3BP1-208ENST00000520177 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
G3BP1-208ENST00000520177 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
G3BP1-208ENST00000520177 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
G3BP1-208ENST00000520177 PPARGC1BQ86YN6 1023 aaKnown RBP24.5■■□□□ 1.51
G3BP1-208ENST00000520177 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
G3BP1-208ENST00000520177 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
G3BP1-208ENST00000520177 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
G3BP1-208ENST00000520177 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
G3BP1-208ENST00000520177 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.37
G3BP1-208ENST00000520177 ABCC9O60706 1549 aa23.59■■□□□ 1.37
G3BP1-208ENST00000520177 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
G3BP1-208ENST00000520177 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
G3BP1-208ENST00000520177 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
G3BP1-208ENST00000520177 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
G3BP1-208ENST00000520177 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
G3BP1-208ENST00000520177 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
G3BP1-208ENST00000520177 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
G3BP1-208ENST00000520177 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
G3BP1-208ENST00000520177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
G3BP1-208ENST00000520177 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
G3BP1-208ENST00000520177 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
G3BP1-208ENST00000520177 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
G3BP1-208ENST00000520177 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
G3BP1-208ENST00000520177 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.26
G3BP1-208ENST00000520177 WIZO95785 1651 aa22.83■■□□□ 1.25
G3BP1-208ENST00000520177 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
G3BP1-208ENST00000520177 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
G3BP1-208ENST00000520177 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
G3BP1-208ENST00000520177 CENPBP07199 599 aaPredicted RBP22.71■■□□□ 1.23
G3BP1-208ENST00000520177 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
G3BP1-208ENST00000520177 NACADO15069 1562 aa22.64■■□□□ 1.21
G3BP1-208ENST00000520177 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
G3BP1-208ENST00000520177 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
G3BP1-208ENST00000520177 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
G3BP1-208ENST00000520177 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
G3BP1-208ENST00000520177 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
G3BP1-208ENST00000520177 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
G3BP1-208ENST00000520177 SOGA1O94964 1423 aa22.42■■□□□ 1.18
G3BP1-208ENST00000520177 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
G3BP1-208ENST00000520177 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.18
G3BP1-208ENST00000520177 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
G3BP1-208ENST00000520177 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
G3BP1-208ENST00000520177 MYT1Q01538 1121 aa22.36■■□□□ 1.17
G3BP1-208ENST00000520177 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
G3BP1-208ENST00000520177 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
G3BP1-208ENST00000520177 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
G3BP1-208ENST00000520177 MIER1Q8N108 512 aa22.27■■□□□ 1.16
G3BP1-208ENST00000520177 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
G3BP1-208ENST00000520177 EEA1Q15075 1411 aa22.24■■□□□ 1.15
G3BP1-208ENST00000520177 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
G3BP1-208ENST00000520177 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
G3BP1-208ENST00000520177 CLIP1P30622 1438 aa22■■□□□ 1.11
G3BP1-208ENST00000520177 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
G3BP1-208ENST00000520177 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
G3BP1-208ENST00000520177 KIF21BO75037 1637 aa21.95■■□□□ 1.1
G3BP1-208ENST00000520177 VPS8Q8N3P4 1428 aa21.94■■□□□ 1.1
G3BP1-208ENST00000520177 APLP2Q06481 763 aa21.93■■□□□ 1.1
G3BP1-208ENST00000520177 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
G3BP1-208ENST00000520177 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
G3BP1-208ENST00000520177 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
G3BP1-208ENST00000520177 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
G3BP1-208ENST00000520177 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
G3BP1-208ENST00000520177 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
G3BP1-208ENST00000520177 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
G3BP1-208ENST00000520177 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
G3BP1-208ENST00000520177 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
G3BP1-208ENST00000520177 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
G3BP1-208ENST00000520177 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
G3BP1-208ENST00000520177 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
G3BP1-208ENST00000520177 TSHZ2Q9NRE2 1034 aa21.55■■□□□ 1.04
G3BP1-208ENST00000520177 ATAD2BQ9ULI0 1458 aa21.54■■□□□ 1.04
G3BP1-208ENST00000520177 TOP2BQ02880 1626 aa21.54■■□□□ 1.04
G3BP1-208ENST00000520177 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
G3BP1-208ENST00000520177 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
G3BP1-208ENST00000520177 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
G3BP1-208ENST00000520177 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
G3BP1-208ENST00000520177 ITGAEP38570 1179 aa21.46■■□□□ 1.03
G3BP1-208ENST00000520177 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
G3BP1-208ENST00000520177 CUX2O14529 1486 aa21.42■■□□□ 1.02
G3BP1-208ENST00000520177 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
G3BP1-208ENST00000520177 ANP32EQ9BTT0 268 aa21.38■■□□□ 1.01
G3BP1-208ENST00000520177 BCANQ96GW7 911 aa21.37■■□□□ 1.01
G3BP1-208ENST00000520177 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
G3BP1-208ENST00000520177 MAPKBP1O60336 1514 aa21.3■■□□□ 1
G3BP1-208ENST00000520177 ARHGAP35Q9NRY4 1499 aa21.3■■□□□ 1
G3BP1-208ENST00000520177 FKBP8Q14318 412 aa21.28■■□□□ 1
G3BP1-208ENST00000520177 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
G3BP1-208ENST00000520177 KIF27Q86VH2 1401 aa21.27■■□□□ 1
G3BP1-208ENST00000520177 CUX1P39880 1505 aa21.26■□□□□ 0.99
G3BP1-208ENST00000520177 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
G3BP1-208ENST00000520177 SIN3AQ96ST3 1273 aa21.21■□□□□ 0.99
G3BP1-208ENST00000520177 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
G3BP1-208ENST00000520177 TIAM1Q13009 1591 aa21.14■□□□□ 0.98
G3BP1-208ENST00000520177 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms