Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.96□□□□□ -0.338e-26■□□□□ 8.8
PHF6Q8IWS0 NARF-207ENST00000577410 873 ntTSL 528.45■■■□□ 2.146e-6■□□□□ 8.7
PHF6Q8IWS0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.14■■□□□ 1.626e-6■□□□□ 8.7
PHF6Q8IWS0 HIST1H3J-202ENST00000479986 522 ntTSL 224.86■■□□□ 1.576e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-216ENST00000581202 1013 ntTSL 521.52■■□□□ 1.046e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.67■□□□□ 0.96e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.37■□□□□ 0.856e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-217ENST00000581743 785 ntTSL 519.45■□□□□ 0.76e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-218ENST00000581795 1430 ntTSL 219.03■□□□□ 0.646e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.53■□□□□ 0.566e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-203ENST00000374611 1722 ntTSL 517.65■□□□□ 0.426e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.49■□□□□ 0.396e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-208ENST00000577432 866 ntTSL 517.4■□□□□ 0.386e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-210ENST00000578082 841 ntTSL 416.71■□□□□ 0.276e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-220ENST00000582907 1454 ntTSL 515.79■□□□□ 0.126e-6■□□□□ 8.7
PHF6Q8IWS0 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC13.39□□□□□ -0.276e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.536e-6■□□□□ 8.7
PHF6Q8IWS0 NARF-209ENST00000577812 2598 ntTSL 511.52□□□□□ -0.576e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.68■■□□□ 1.76e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-205ENST00000585636 561 ntTSL 225.68■■□□□ 1.76e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-206ENST00000585695 1121 ntTSL 225.68■■□□□ 1.76e-6■□□□□ 8.7
PHF6Q8IWS0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.526e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-216ENST00000592857 837 ntTSL 324.19■■□□□ 1.466e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.316e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-209ENST00000479398 550 ntTSL 522.99■■□□□ 1.276e-6■□□□□ 8.7
PHF6Q8IWS0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.276e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-204ENST00000585523 574 ntTSL 422.62■■□□□ 1.216e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-209ENST00000588049 839 ntTSL 522.62■■□□□ 1.216e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-210ENST00000588315 1409 ntTSL 222.31■■□□□ 1.166e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.096e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-208ENST00000586633 566 ntTSL 321■□□□□ 0.956e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21■□□□□ 0.956e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.876e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.5■□□□□ 0.556e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.516e-6■□□□□ 8.7
PHF6Q8IWS0 SLC25A39-214ENST00000591151 636 ntTSL 217.27■□□□□ 0.366e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.94■□□□□ 0.36e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-210ENST00000427710 589 ntTSL 416.53■□□□□ 0.246e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-205ENST00000426248 4134 ntTSL 1 (best)15.62■□□□□ 0.096e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.15□□□□□ -0.316e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-203ENST00000411900 552 ntTSL 411.54□□□□□ -0.566e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-206ENST00000452162 2359 ntTSL 1 (best)10.97□□□□□ -0.656e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-207ENST00000457109 520 ntTSL 310.37□□□□□ -0.756e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.846e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.42□□□□□ -1.066e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.096e-6■□□□□ 8.7
PHF6Q8IWS0 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.16□□□□□ -1.266e-6■□□□□ 8.7
PHF6Q8IWS0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.59□□□□□ -1.836e-6■□□□□ 8.7
PHF6Q8IWS0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.11■□□□□ 0.331e-25■□□□□ 8.7
PHF6Q8IWS0 SNORD45A-201ENST00000384512 84 ntBASIC1.2□□□□□ -2.228e-46■□□□□ 8.7
PHF6Q8IWS0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.057e-8■□□□□ 8.7
PHF6Q8IWS0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.251e-19■□□□□ 8.7
PHF6Q8IWS0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.261e-19■□□□□ 8.7
PHF6Q8IWS0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.291e-19■□□□□ 8.7
PHF6Q8IWS0 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.41e-19■□□□□ 8.7
PHF6Q8IWS0 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.411e-19■□□□□ 8.7
PHF6Q8IWS0 PRAME-213ENST00000492657 2831 ntTSL 1 (best)12.29□□□□□ -0.441e-19■□□□□ 8.7
PHF6Q8IWS0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.291e-6■□□□□ 8.6
PHF6Q8IWS0 RAC3-204ENST00000585014 798 ntTSL 220.74■□□□□ 0.911e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-211ENST00000529412 711 ntTSL 319.92■□□□□ 0.781e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-213ENST00000529739 842 ntTSL 219.83■□□□□ 0.771e-6■□□□□ 8.6
PHF6Q8IWS0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.45■□□□□ 0.061e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-215ENST00000530560 558 ntTSL 314.35□□□□□ -0.111e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-221ENST00000592137 536 ntTSL 314.34□□□□□ -0.111e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.331e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC11.24□□□□□ -0.611e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.631e-6■□□□□ 8.6
PHF6Q8IWS0 TYK2-208ENST00000527481 628 ntTSL 310.86□□□□□ -0.671e-6■□□□□ 8.6
PHF6Q8IWS0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.73□□□□□ -0.056e-26■□□□□ 8.6
PHF6Q8IWS0 PKM-209ENST00000563986 825 ntTSL 214.02□□□□□ -0.173e-6■□□□□ 8.6
PHF6Q8IWS0 PKM-224ENST00000569857 1355 ntTSL 513.19□□□□□ -0.33e-6■□□□□ 8.6
PHF6Q8IWS0 PKM-205ENST00000561609 1568 ntTSL 1 (best)10.73□□□□□ -0.693e-6■□□□□ 8.6
PHF6Q8IWS0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.6■■□□□ 1.372e-6■□□□□ 8.6
PHF6Q8IWS0 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)23.52■■□□□ 1.362e-6■□□□□ 8.6
PHF6Q8IWS0 SNRNP70-209ENST00000601065 1757 ntTSL 322.08■■□□□ 1.132e-6■□□□□ 8.6
PHF6Q8IWS0 SNRNP70-202ENST00000401730 3144 ntTSL 216.28■□□□□ 0.22e-6■□□□□ 8.6
PHF6Q8IWS0 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.07■□□□□ 02e-6■□□□□ 8.6
PHF6Q8IWS0 EEF1A1-205ENST00000455918 701 ntTSL 224.12■■□□□ 1.452e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-216ENST00000571617 505 ntTSL 323.81■■□□□ 1.42e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.3■■□□□ 1.162e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.72■□□□□ 0.752e-7■□□□□ 8.6
PHF6Q8IWS0 AP1G1-215ENST00000568327 1724 ntTSL 519.3■□□□□ 0.687e-25■□□□□ 8.6
PHF6Q8IWS0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.672e-7■□□□□ 8.6
PHF6Q8IWS0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.522e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-202ENST00000415593 1669 ntTSL 1 (best)16.37■□□□□ 0.212e-7■□□□□ 8.6
PHF6Q8IWS0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.042e-7■□□□□ 8.6
PHF6Q8IWS0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.12e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-209ENST00000474712 390 ntTSL 214.41□□□□□ -0.12e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-220ENST00000575069 2453 ntTSL 214.26□□□□□ -0.132e-7■□□□□ 8.6
PHF6Q8IWS0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.132e-7■□□□□ 8.6
PHF6Q8IWS0 P4HB-210ENST00000476482 765 ntTSL 1 (best)13.27□□□□□ -0.292e-7■□□□□ 8.6
PHF6Q8IWS0 AP1G1-208ENST00000565009 2494 ntTSL 513.1□□□□□ -0.317e-25■□□□□ 8.6
PHF6Q8IWS0 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.522e-7■□□□□ 8.6
PHF6Q8IWS0 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.547e-25■□□□□ 8.6
PHF6Q8IWS0 EEF1A1-204ENST00000356303 635 ntTSL 210.7□□□□□ -0.72e-7■□□□□ 8.6
PHF6Q8IWS0 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.947e-25■□□□□ 8.6
PHF6Q8IWS0 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.197e-25■□□□□ 8.6
PHF6Q8IWS0 AP1G1-211ENST00000565642 2794 ntTSL 56.07□□□□□ -1.447e-25■□□□□ 8.6
PHF6Q8IWS0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.03□□□□□ -1.62e-7■□□□□ 8.6
PHF6Q8IWS0 AP1G1-213ENST00000566179 562 ntTSL 54.71□□□□□ -1.667e-25■□□□□ 8.6
Retrieved 100 of 4,170 protein–RNA pairs in 73.4 ms