Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
MRM3Q9HC36 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
MRM3Q9HC36 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
MRM3Q9HC36 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
MRM3Q9HC36 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
MRM3Q9HC36 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
MRM3Q9HC36 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.26■■□□□ 1.95
MRM3Q9HC36 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
MRM3Q9HC36 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
MRM3Q9HC36 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.26■■□□□ 1.95
MRM3Q9HC36 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
MRM3Q9HC36 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
MRM3Q9HC36 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
MRM3Q9HC36 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
MRM3Q9HC36 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
MRM3Q9HC36 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.21■■□□□ 1.95
MRM3Q9HC36 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.21■■□□□ 1.95
MRM3Q9HC36 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.21■■□□□ 1.95
MRM3Q9HC36 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
MRM3Q9HC36 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
MRM3Q9HC36 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.94
MRM3Q9HC36 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
MRM3Q9HC36 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
MRM3Q9HC36 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
MRM3Q9HC36 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.17■■□□□ 1.94
MRM3Q9HC36 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
MRM3Q9HC36 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
MRM3Q9HC36 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.12■■□□□ 1.93
MRM3Q9HC36 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
MRM3Q9HC36 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
MRM3Q9HC36 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
MRM3Q9HC36 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
MRM3Q9HC36 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.09■■□□□ 1.93
MRM3Q9HC36 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.08■■□□□ 1.93
MRM3Q9HC36 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
MRM3Q9HC36 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
MRM3Q9HC36 AL133380.1-201ENST00000506013 324 ntBASIC27.07■■□□□ 1.92
MRM3Q9HC36 AL161658.1-201ENST00000623641 1967 ntBASIC27.07■■□□□ 1.92
MRM3Q9HC36 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.05■■□□□ 1.92
MRM3Q9HC36 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.05■■□□□ 1.92
MRM3Q9HC36 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
MRM3Q9HC36 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
MRM3Q9HC36 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MRM3Q9HC36 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.03■■□□□ 1.92
MRM3Q9HC36 WASH5P-204ENST00000632292 975 ntBASIC27.03■■□□□ 1.92
MRM3Q9HC36 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
MRM3Q9HC36 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
MRM3Q9HC36 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
MRM3Q9HC36 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
MRM3Q9HC36 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.01■■□□□ 1.91
MRM3Q9HC36 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
MRM3Q9HC36 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
MRM3Q9HC36 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
MRM3Q9HC36 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MRM3Q9HC36 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
MRM3Q9HC36 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
MRM3Q9HC36 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
MRM3Q9HC36 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
MRM3Q9HC36 ABCB10P1-201ENST00000614297 2181 ntBASIC26.97■■□□□ 1.91
MRM3Q9HC36 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.96■■□□□ 1.91
MRM3Q9HC36 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MRM3Q9HC36 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
MRM3Q9HC36 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.93■■□□□ 1.9
MRM3Q9HC36 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
MRM3Q9HC36 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MRM3Q9HC36 RARRES2P7-201ENST00000567349 469 ntBASIC26.92■■□□□ 1.9
MRM3Q9HC36 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MRM3Q9HC36 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MRM3Q9HC36 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MRM3Q9HC36 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MRM3Q9HC36 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
MRM3Q9HC36 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MRM3Q9HC36 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
MRM3Q9HC36 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MRM3Q9HC36 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
MRM3Q9HC36 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
MRM3Q9HC36 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
MRM3Q9HC36 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
MRM3Q9HC36 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
MRM3Q9HC36 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.86■■□□□ 1.89
MRM3Q9HC36 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
MRM3Q9HC36 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MRM3Q9HC36 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MRM3Q9HC36 SETD8P1-201ENST00000623146 1180 ntBASIC26.85■■□□□ 1.89
MRM3Q9HC36 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
MRM3Q9HC36 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
MRM3Q9HC36 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
MRM3Q9HC36 ST7-AS1-201ENST00000456775 1889 ntBASIC26.84■■□□□ 1.89
MRM3Q9HC36 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
MRM3Q9HC36 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.83■■□□□ 1.89
MRM3Q9HC36 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
MRM3Q9HC36 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.83■■□□□ 1.89
MRM3Q9HC36 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.88
MRM3Q9HC36 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
MRM3Q9HC36 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
MRM3Q9HC36 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MRM3Q9HC36 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
MRM3Q9HC36 AL135925.1-201ENST00000605920 1701 ntBASIC26.79■■□□□ 1.88
MRM3Q9HC36 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
MRM3Q9HC36 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms