Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PNMA1Q8ND90 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
PNMA1Q8ND90 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.85■■■□□ 2.69
PNMA1Q8ND90 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PNMA1Q8ND90 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.82■■■□□ 2.69
PNMA1Q8ND90 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.82■■■□□ 2.68
PNMA1Q8ND90 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PNMA1Q8ND90 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.82■■■□□ 2.68
PNMA1Q8ND90 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
PNMA1Q8ND90 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PNMA1Q8ND90 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PNMA1Q8ND90 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PNMA1Q8ND90 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PNMA1Q8ND90 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PNMA1Q8ND90 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PNMA1Q8ND90 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.75■■■□□ 2.67
PNMA1Q8ND90 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PNMA1Q8ND90 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
PNMA1Q8ND90 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
PNMA1Q8ND90 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PNMA1Q8ND90 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PNMA1Q8ND90 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PNMA1Q8ND90 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.67■■■□□ 2.66
PNMA1Q8ND90 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PNMA1Q8ND90 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
PNMA1Q8ND90 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PNMA1Q8ND90 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
PNMA1Q8ND90 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PNMA1Q8ND90 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PNMA1Q8ND90 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.62■■■□□ 2.65
PNMA1Q8ND90 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.61■■■□□ 2.65
PNMA1Q8ND90 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PNMA1Q8ND90 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PNMA1Q8ND90 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.59■■■□□ 2.65
PNMA1Q8ND90 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PNMA1Q8ND90 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PNMA1Q8ND90 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.58■■■□□ 2.65
PNMA1Q8ND90 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PNMA1Q8ND90 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PNMA1Q8ND90 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
PNMA1Q8ND90 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PNMA1Q8ND90 MIR762-201ENST00000390236 83 ntBASIC31.54■■■□□ 2.64
PNMA1Q8ND90 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.51■■■□□ 2.63
PNMA1Q8ND90 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PNMA1Q8ND90 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
PNMA1Q8ND90 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
PNMA1Q8ND90 AP006261.1-201ENST00000584783 668 ntBASIC31.5■■■□□ 2.63
PNMA1Q8ND90 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
PNMA1Q8ND90 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.49■■■□□ 2.63
PNMA1Q8ND90 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.48■■■□□ 2.63
PNMA1Q8ND90 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PNMA1Q8ND90 AL162393.1-201ENST00000437852 946 ntBASIC31.47■■■□□ 2.63
PNMA1Q8ND90 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.47■■■□□ 2.63
PNMA1Q8ND90 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PNMA1Q8ND90 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
PNMA1Q8ND90 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PNMA1Q8ND90 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.46■■■□□ 2.63
PNMA1Q8ND90 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PNMA1Q8ND90 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PNMA1Q8ND90 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PNMA1Q8ND90 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.42■■■□□ 2.62
PNMA1Q8ND90 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
PNMA1Q8ND90 RPS2P35-201ENST00000443417 897 ntBASIC31.41■■■□□ 2.62
PNMA1Q8ND90 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
PNMA1Q8ND90 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PNMA1Q8ND90 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PNMA1Q8ND90 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
PNMA1Q8ND90 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.4■■■□□ 2.62
PNMA1Q8ND90 AC005559.1-201ENST00000589661 871 ntBASIC31.4■■■□□ 2.62
PNMA1Q8ND90 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PNMA1Q8ND90 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PNMA1Q8ND90 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PNMA1Q8ND90 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PNMA1Q8ND90 DUX4L28-201ENST00000623687 678 ntBASIC31.39■■■□□ 2.62
PNMA1Q8ND90 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PNMA1Q8ND90 MIR3665-201ENST00000578708 105 ntBASIC31.38■■■□□ 2.61
PNMA1Q8ND90 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PNMA1Q8ND90 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PNMA1Q8ND90 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PNMA1Q8ND90 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.37■■■□□ 2.61
PNMA1Q8ND90 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PNMA1Q8ND90 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
PNMA1Q8ND90 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PNMA1Q8ND90 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PNMA1Q8ND90 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PNMA1Q8ND90 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.35■■■□□ 2.61
PNMA1Q8ND90 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
PNMA1Q8ND90 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PNMA1Q8ND90 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
PNMA1Q8ND90 AL161658.1-201ENST00000623641 1967 ntBASIC31.34■■■□□ 2.61
PNMA1Q8ND90 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
PNMA1Q8ND90 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PNMA1Q8ND90 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PNMA1Q8ND90 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.32■■■□□ 2.6
PNMA1Q8ND90 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.32■■■□□ 2.6
PNMA1Q8ND90 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PNMA1Q8ND90 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PNMA1Q8ND90 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PNMA1Q8ND90 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PNMA1Q8ND90 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms