Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.72■■■□□ 2.03
PCDH20Q8N6Y1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.72■■■□□ 2.03
PCDH20Q8N6Y1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDH20Q8N6Y1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
PCDH20Q8N6Y1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDH20Q8N6Y1 WASH5P-204ENST00000632292 975 ntBASIC27.69■■■□□ 2.02
PCDH20Q8N6Y1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDH20Q8N6Y1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDH20Q8N6Y1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDH20Q8N6Y1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PCDH20Q8N6Y1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDH20Q8N6Y1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDH20Q8N6Y1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.67■■■□□ 2.02
PCDH20Q8N6Y1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDH20Q8N6Y1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.64■■■□□ 2.02
PCDH20Q8N6Y1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.64■■■□□ 2.02
PCDH20Q8N6Y1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDH20Q8N6Y1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDH20Q8N6Y1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
PCDH20Q8N6Y1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
PCDH20Q8N6Y1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PCDH20Q8N6Y1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PCDH20Q8N6Y1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
PCDH20Q8N6Y1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PCDH20Q8N6Y1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PCDH20Q8N6Y1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.57■■■□□ 2
PCDH20Q8N6Y1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
PCDH20Q8N6Y1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
PCDH20Q8N6Y1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDH20Q8N6Y1 AC120057.4-201ENST00000624722 1615 ntBASIC27.56■■■□□ 2
PCDH20Q8N6Y1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDH20Q8N6Y1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PCDH20Q8N6Y1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.53■■■□□ 2
PCDH20Q8N6Y1 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.52■■■□□ 2
PCDH20Q8N6Y1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH20Q8N6Y1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH20Q8N6Y1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDH20Q8N6Y1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.5■■□□□ 1.99
PCDH20Q8N6Y1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.49■■□□□ 1.99
PCDH20Q8N6Y1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDH20Q8N6Y1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.49■■□□□ 1.99
PCDH20Q8N6Y1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH20Q8N6Y1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH20Q8N6Y1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.47■■□□□ 1.99
PCDH20Q8N6Y1 AP006261.1-201ENST00000584783 668 ntBASIC27.47■■□□□ 1.99
PCDH20Q8N6Y1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH20Q8N6Y1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
PCDH20Q8N6Y1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH20Q8N6Y1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.44■■□□□ 1.98
PCDH20Q8N6Y1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH20Q8N6Y1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH20Q8N6Y1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH20Q8N6Y1 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDH20Q8N6Y1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH20Q8N6Y1 MIR762-201ENST00000390236 83 ntBASIC27.42■■□□□ 1.98
PCDH20Q8N6Y1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
PCDH20Q8N6Y1 AL162393.1-201ENST00000437852 946 ntBASIC27.38■■□□□ 1.97
PCDH20Q8N6Y1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH20Q8N6Y1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH20Q8N6Y1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH20Q8N6Y1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PCDH20Q8N6Y1 MIR3665-201ENST00000578708 105 ntBASIC27.35■■□□□ 1.97
PCDH20Q8N6Y1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PCDH20Q8N6Y1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDH20Q8N6Y1 RPS2P35-201ENST00000443417 897 ntBASIC27.34■■□□□ 1.97
PCDH20Q8N6Y1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDH20Q8N6Y1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDH20Q8N6Y1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.33■■□□□ 1.97
PCDH20Q8N6Y1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDH20Q8N6Y1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDH20Q8N6Y1 AC005559.1-201ENST00000589661 871 ntBASIC27.32■■□□□ 1.96
PCDH20Q8N6Y1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDH20Q8N6Y1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDH20Q8N6Y1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
PCDH20Q8N6Y1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDH20Q8N6Y1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDH20Q8N6Y1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDH20Q8N6Y1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH20Q8N6Y1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH20Q8N6Y1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH20Q8N6Y1 DUX4L28-201ENST00000623687 678 ntBASIC27.28■■□□□ 1.96
PCDH20Q8N6Y1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDH20Q8N6Y1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
PCDH20Q8N6Y1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDH20Q8N6Y1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
PCDH20Q8N6Y1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDH20Q8N6Y1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PCDH20Q8N6Y1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDH20Q8N6Y1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDH20Q8N6Y1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDH20Q8N6Y1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.23■■□□□ 1.95
PCDH20Q8N6Y1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDH20Q8N6Y1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDH20Q8N6Y1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms