Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.86■■□□□ 1.73
ARHGEF39Q8N4T4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF39Q8N4T4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
ARHGEF39Q8N4T4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF39Q8N4T4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF39Q8N4T4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ARHGEF39Q8N4T4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ARHGEF39Q8N4T4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.79■■□□□ 1.72
ARHGEF39Q8N4T4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ARHGEF39Q8N4T4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.77■■□□□ 1.72
ARHGEF39Q8N4T4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ARHGEF39Q8N4T4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ARHGEF39Q8N4T4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF39Q8N4T4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.75■■□□□ 1.71
ARHGEF39Q8N4T4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF39Q8N4T4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF39Q8N4T4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF39Q8N4T4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.71■■□□□ 1.71
ARHGEF39Q8N4T4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF39Q8N4T4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF39Q8N4T4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF39Q8N4T4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
ARHGEF39Q8N4T4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF39Q8N4T4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.65■■□□□ 1.7
ARHGEF39Q8N4T4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF39Q8N4T4 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.64■■□□□ 1.69
ARHGEF39Q8N4T4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
ARHGEF39Q8N4T4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ARHGEF39Q8N4T4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ARHGEF39Q8N4T4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ARHGEF39Q8N4T4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
ARHGEF39Q8N4T4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ARHGEF39Q8N4T4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.6■■□□□ 1.69
ARHGEF39Q8N4T4 MIR762-201ENST00000390236 83 ntBASIC25.59■■□□□ 1.69
ARHGEF39Q8N4T4 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.58■■□□□ 1.69
ARHGEF39Q8N4T4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF39Q8N4T4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.57■■□□□ 1.68
ARHGEF39Q8N4T4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ARHGEF39Q8N4T4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF39Q8N4T4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.56■■□□□ 1.68
ARHGEF39Q8N4T4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF39Q8N4T4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.55■■□□□ 1.68
ARHGEF39Q8N4T4 AP006261.1-201ENST00000584783 668 ntBASIC25.54■■□□□ 1.68
ARHGEF39Q8N4T4 AL162393.1-201ENST00000437852 946 ntBASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF39Q8N4T4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF39Q8N4T4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF39Q8N4T4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.49■■□□□ 1.67
ARHGEF39Q8N4T4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 DUX4L28-201ENST00000623687 678 ntBASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF39Q8N4T4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ARHGEF39Q8N4T4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF39Q8N4T4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF39Q8N4T4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.46■■□□□ 1.67
ARHGEF39Q8N4T4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.67
ARHGEF39Q8N4T4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.45■■□□□ 1.66
ARHGEF39Q8N4T4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF39Q8N4T4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF39Q8N4T4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 RPS2P35-201ENST00000443417 897 ntBASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 AC005559.1-201ENST00000589661 871 ntBASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 AL161658.1-201ENST00000623641 1967 ntBASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 MIR3665-201ENST00000578708 105 ntBASIC25.43■■□□□ 1.66
ARHGEF39Q8N4T4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
ARHGEF39Q8N4T4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ARHGEF39Q8N4T4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ARHGEF39Q8N4T4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
ARHGEF39Q8N4T4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms