Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.86■■□□□ 1.73
ARHGEF39Q8N4T4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
ARHGEF39Q8N4T4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF39Q8N4T4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
ARHGEF39Q8N4T4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF39Q8N4T4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF39Q8N4T4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ARHGEF39Q8N4T4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ARHGEF39Q8N4T4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.79■■□□□ 1.72
ARHGEF39Q8N4T4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ARHGEF39Q8N4T4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.77■■□□□ 1.72
ARHGEF39Q8N4T4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ARHGEF39Q8N4T4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ARHGEF39Q8N4T4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF39Q8N4T4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.75■■□□□ 1.71
ARHGEF39Q8N4T4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF39Q8N4T4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF39Q8N4T4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF39Q8N4T4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.71■■□□□ 1.71
ARHGEF39Q8N4T4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF39Q8N4T4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF39Q8N4T4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF39Q8N4T4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF39Q8N4T4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
ARHGEF39Q8N4T4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF39Q8N4T4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.65■■□□□ 1.7
ARHGEF39Q8N4T4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF39Q8N4T4 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.64■■□□□ 1.69
ARHGEF39Q8N4T4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
ARHGEF39Q8N4T4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ARHGEF39Q8N4T4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ARHGEF39Q8N4T4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ARHGEF39Q8N4T4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
ARHGEF39Q8N4T4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ARHGEF39Q8N4T4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.6■■□□□ 1.69
ARHGEF39Q8N4T4 MIR762-201ENST00000390236 83 ntBASIC25.59■■□□□ 1.69
ARHGEF39Q8N4T4 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.58■■□□□ 1.69
ARHGEF39Q8N4T4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF39Q8N4T4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.57■■□□□ 1.68
ARHGEF39Q8N4T4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ARHGEF39Q8N4T4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF39Q8N4T4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.56■■□□□ 1.68
ARHGEF39Q8N4T4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF39Q8N4T4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.55■■□□□ 1.68
ARHGEF39Q8N4T4 AP006261.1-201ENST00000584783 668 ntBASIC25.54■■□□□ 1.68
ARHGEF39Q8N4T4 AL162393.1-201ENST00000437852 946 ntBASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF39Q8N4T4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF39Q8N4T4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF39Q8N4T4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ARHGEF39Q8N4T4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARHGEF39Q8N4T4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.5■■□□□ 1.67
ARHGEF39Q8N4T4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.49■■□□□ 1.67
ARHGEF39Q8N4T4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 DUX4L28-201ENST00000623687 678 ntBASIC25.48■■□□□ 1.67
ARHGEF39Q8N4T4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF39Q8N4T4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ARHGEF39Q8N4T4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF39Q8N4T4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF39Q8N4T4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.46■■□□□ 1.67
ARHGEF39Q8N4T4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.67
ARHGEF39Q8N4T4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.45■■□□□ 1.66
ARHGEF39Q8N4T4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF39Q8N4T4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF39Q8N4T4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 RPS2P35-201ENST00000443417 897 ntBASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 AC005559.1-201ENST00000589661 871 ntBASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 AL161658.1-201ENST00000623641 1967 ntBASIC25.44■■□□□ 1.66
ARHGEF39Q8N4T4 MIR3665-201ENST00000578708 105 ntBASIC25.43■■□□□ 1.66
ARHGEF39Q8N4T4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
ARHGEF39Q8N4T4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ARHGEF39Q8N4T4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ARHGEF39Q8N4T4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
ARHGEF39Q8N4T4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms