Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HIST3H2AQ7L7L0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HIST3H2AQ7L7L0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HIST3H2AQ7L7L0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.58■■□□□ 1.53
HIST3H2AQ7L7L0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.58■■□□□ 1.53
HIST3H2AQ7L7L0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
HIST3H2AQ7L7L0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
HIST3H2AQ7L7L0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HIST3H2AQ7L7L0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HIST3H2AQ7L7L0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.56■■□□□ 1.52
HIST3H2AQ7L7L0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HIST3H2AQ7L7L0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.55■■□□□ 1.52
HIST3H2AQ7L7L0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.54■■□□□ 1.52
HIST3H2AQ7L7L0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HIST3H2AQ7L7L0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HIST3H2AQ7L7L0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.54■■□□□ 1.52
HIST3H2AQ7L7L0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.53■■□□□ 1.52
HIST3H2AQ7L7L0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
HIST3H2AQ7L7L0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
HIST3H2AQ7L7L0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.51■■□□□ 1.51
HIST3H2AQ7L7L0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.51■■□□□ 1.51
HIST3H2AQ7L7L0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.51■■□□□ 1.51
HIST3H2AQ7L7L0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HIST3H2AQ7L7L0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HIST3H2AQ7L7L0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HIST3H2AQ7L7L0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HIST3H2AQ7L7L0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
HIST3H2AQ7L7L0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
HIST3H2AQ7L7L0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HIST3H2AQ7L7L0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HIST3H2AQ7L7L0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HIST3H2AQ7L7L0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
HIST3H2AQ7L7L0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.45■■□□□ 1.5
HIST3H2AQ7L7L0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.43■■□□□ 1.5
HIST3H2AQ7L7L0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HIST3H2AQ7L7L0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.41■■□□□ 1.5
HIST3H2AQ7L7L0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HIST3H2AQ7L7L0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HIST3H2AQ7L7L0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HIST3H2AQ7L7L0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HIST3H2AQ7L7L0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
HIST3H2AQ7L7L0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
HIST3H2AQ7L7L0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.34■■□□□ 1.49
HIST3H2AQ7L7L0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HIST3H2AQ7L7L0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HIST3H2AQ7L7L0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
HIST3H2AQ7L7L0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HIST3H2AQ7L7L0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HIST3H2AQ7L7L0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
HIST3H2AQ7L7L0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.33■■□□□ 1.49
HIST3H2AQ7L7L0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.32■■□□□ 1.48
HIST3H2AQ7L7L0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.28■■□□□ 1.48
HIST3H2AQ7L7L0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.28■■□□□ 1.48
HIST3H2AQ7L7L0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HIST3H2AQ7L7L0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
HIST3H2AQ7L7L0 AL161658.1-201ENST00000623641 1967 ntBASIC24.26■■□□□ 1.47
HIST3H2AQ7L7L0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.26■■□□□ 1.47
HIST3H2AQ7L7L0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
HIST3H2AQ7L7L0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HIST3H2AQ7L7L0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HIST3H2AQ7L7L0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HIST3H2AQ7L7L0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
HIST3H2AQ7L7L0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HIST3H2AQ7L7L0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HIST3H2AQ7L7L0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HIST3H2AQ7L7L0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HIST3H2AQ7L7L0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HIST3H2AQ7L7L0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.21■■□□□ 1.47
HIST3H2AQ7L7L0 RARRES2P7-201ENST00000567349 469 ntBASIC24.21■■□□□ 1.47
HIST3H2AQ7L7L0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
HIST3H2AQ7L7L0 AL133380.1-201ENST00000506013 324 ntBASIC24.2■■□□□ 1.46
HIST3H2AQ7L7L0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HIST3H2AQ7L7L0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HIST3H2AQ7L7L0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
HIST3H2AQ7L7L0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HIST3H2AQ7L7L0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
HIST3H2AQ7L7L0 WASH5P-204ENST00000632292 975 ntBASIC24.19■■□□□ 1.46
HIST3H2AQ7L7L0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HIST3H2AQ7L7L0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
HIST3H2AQ7L7L0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.18■■□□□ 1.46
HIST3H2AQ7L7L0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
HIST3H2AQ7L7L0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.17■■□□□ 1.46
HIST3H2AQ7L7L0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HIST3H2AQ7L7L0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HIST3H2AQ7L7L0 ABCB10P1-201ENST00000614297 2181 ntBASIC24.17■■□□□ 1.46
HIST3H2AQ7L7L0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.16■■□□□ 1.46
HIST3H2AQ7L7L0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
HIST3H2AQ7L7L0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HIST3H2AQ7L7L0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
HIST3H2AQ7L7L0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HIST3H2AQ7L7L0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HIST3H2AQ7L7L0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST3H2AQ7L7L0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
HIST3H2AQ7L7L0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HIST3H2AQ7L7L0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
HIST3H2AQ7L7L0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HIST3H2AQ7L7L0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HIST3H2AQ7L7L0 SETD8P1-201ENST00000623146 1180 ntBASIC24.09■■□□□ 1.45
HIST3H2AQ7L7L0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HIST3H2AQ7L7L0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms