Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
CLCNKAP51800 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CLCNKAP51800 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CLCNKAP51800 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CLCNKAP51800 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CLCNKAP51800 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CLCNKAP51800 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
CLCNKAP51800 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CLCNKAP51800 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLCNKAP51800 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLCNKAP51800 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLCNKAP51800 AC120057.4-201ENST00000624722 1615 ntBASIC26.64■■□□□ 1.85
CLCNKAP51800 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CLCNKAP51800 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.63■■□□□ 1.85
CLCNKAP51800 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.63■■□□□ 1.85
CLCNKAP51800 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLCNKAP51800 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.61■■□□□ 1.85
CLCNKAP51800 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLCNKAP51800 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CLCNKAP51800 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.6■■□□□ 1.85
CLCNKAP51800 AP006261.1-201ENST00000584783 668 ntBASIC26.6■■□□□ 1.85
CLCNKAP51800 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.59■■□□□ 1.85
CLCNKAP51800 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CLCNKAP51800 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLCNKAP51800 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCNKAP51800 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCNKAP51800 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CLCNKAP51800 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCNKAP51800 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCNKAP51800 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CLCNKAP51800 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.54■■□□□ 1.84
CLCNKAP51800 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCNKAP51800 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.53■■□□□ 1.84
CLCNKAP51800 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCNKAP51800 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCNKAP51800 MIR762-201ENST00000390236 83 ntBASIC26.51■■□□□ 1.83
CLCNKAP51800 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
CLCNKAP51800 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
CLCNKAP51800 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.5■■□□□ 1.83
CLCNKAP51800 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLCNKAP51800 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.49■■□□□ 1.83
CLCNKAP51800 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLCNKAP51800 AL162393.1-201ENST00000437852 946 ntBASIC26.48■■□□□ 1.83
CLCNKAP51800 MIR3665-201ENST00000578708 105 ntBASIC26.47■■□□□ 1.83
CLCNKAP51800 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLCNKAP51800 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CLCNKAP51800 RPS2P35-201ENST00000443417 897 ntBASIC26.45■■□□□ 1.82
CLCNKAP51800 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.45■■□□□ 1.82
CLCNKAP51800 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLCNKAP51800 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.44■■□□□ 1.82
CLCNKAP51800 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLCNKAP51800 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.43■■□□□ 1.82
CLCNKAP51800 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLCNKAP51800 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CLCNKAP51800 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CLCNKAP51800 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.41■■□□□ 1.82
CLCNKAP51800 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CLCNKAP51800 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLCNKAP51800 AC005559.1-201ENST00000589661 871 ntBASIC26.4■■□□□ 1.82
CLCNKAP51800 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CLCNKAP51800 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CLCNKAP51800 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CLCNKAP51800 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLCNKAP51800 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CLCNKAP51800 DUX4L28-201ENST00000623687 678 ntBASIC26.38■■□□□ 1.81
CLCNKAP51800 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.37■■□□□ 1.81
CLCNKAP51800 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLCNKAP51800 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLCNKAP51800 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CLCNKAP51800 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CLCNKAP51800 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.33■■□□□ 1.81
CLCNKAP51800 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CLCNKAP51800 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CLCNKAP51800 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLCNKAP51800 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CLCNKAP51800 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CLCNKAP51800 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLCNKAP51800 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CLCNKAP51800 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CLCNKAP51800 AC087741.3-201ENST00000624270 1347 ntBASIC26.3■■□□□ 1.8
CLCNKAP51800 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CLCNKAP51800 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCNKAP51800 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.28■■□□□ 1.8
CLCNKAP51800 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCNKAP51800 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCNKAP51800 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLCNKAP51800 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLCNKAP51800 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.27■■□□□ 1.8
CLCNKAP51800 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CLCNKAP51800 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLCNKAP51800 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLCNKAP51800 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CLCNKAP51800 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLCNKAP51800 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
CLCNKAP51800 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCNKAP51800 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLCNKAP51800 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.23■■□□□ 1.79
CLCNKAP51800 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLCNKAP51800 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLCNKAP51800 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms