Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HCN1O60741 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.17■■□□□ 1.62
HCN1O60741 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HCN1O60741 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.14■■□□□ 1.61
HCN1O60741 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.13■■□□□ 1.61
HCN1O60741 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCN1O60741 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.12■■□□□ 1.61
HCN1O60741 SUZ12P1-203ENST00000578195 985 ntBASIC25.12■■□□□ 1.61
HCN1O60741 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
HCN1O60741 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HCN1O60741 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HCN1O60741 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCN1O60741 AL133380.1-201ENST00000506013 324 ntBASIC25.11■■□□□ 1.61
HCN1O60741 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.11■■□□□ 1.61
HCN1O60741 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCN1O60741 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
HCN1O60741 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HCN1O60741 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCN1O60741 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.1■■□□□ 1.61
HCN1O60741 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.09■■□□□ 1.61
HCN1O60741 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HCN1O60741 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HCN1O60741 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
HCN1O60741 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HCN1O60741 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HCN1O60741 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.06■■□□□ 1.6
HCN1O60741 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HCN1O60741 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.05■■□□□ 1.6
HCN1O60741 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.04■■□□□ 1.6
HCN1O60741 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HCN1O60741 CAHM-201ENST00000604200 896 ntBASIC25.03■■□□□ 1.6
HCN1O60741 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.02■■□□□ 1.6
HCN1O60741 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HCN1O60741 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HCN1O60741 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HCN1O60741 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.01■■□□□ 1.59
HCN1O60741 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HCN1O60741 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HCN1O60741 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.01■■□□□ 1.59
HCN1O60741 AL391121.1-201ENST00000607967 1349 ntBASIC24.99■■□□□ 1.59
HCN1O60741 AC120057.4-201ENST00000624722 1615 ntBASIC24.98■■□□□ 1.59
HCN1O60741 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HCN1O60741 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HCN1O60741 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HCN1O60741 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HCN1O60741 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HCN1O60741 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HCN1O60741 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
HCN1O60741 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.96■■□□□ 1.59
HCN1O60741 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HCN1O60741 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HCN1O60741 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HCN1O60741 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HCN1O60741 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HCN1O60741 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HCN1O60741 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
HCN1O60741 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HCN1O60741 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HCN1O60741 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
HCN1O60741 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HCN1O60741 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HCN1O60741 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.91■■□□□ 1.58
HCN1O60741 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.91■■□□□ 1.58
HCN1O60741 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HCN1O60741 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
HCN1O60741 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HCN1O60741 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.86■■□□□ 1.57
HCN1O60741 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HCN1O60741 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HCN1O60741 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HCN1O60741 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
HCN1O60741 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.82■■□□□ 1.56
HCN1O60741 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HCN1O60741 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HCN1O60741 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
HCN1O60741 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HCN1O60741 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HCN1O60741 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HCN1O60741 AP006261.1-201ENST00000584783 668 ntBASIC24.79■■□□□ 1.56
HCN1O60741 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
HCN1O60741 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HCN1O60741 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.76■■□□□ 1.55
HCN1O60741 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.76■■□□□ 1.55
HCN1O60741 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HCN1O60741 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.76■■□□□ 1.55
HCN1O60741 RPS2P35-201ENST00000443417 897 ntBASIC24.75■■□□□ 1.55
HCN1O60741 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.74■■□□□ 1.55
HCN1O60741 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HCN1O60741 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.73■■□□□ 1.55
HCN1O60741 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HCN1O60741 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HCN1O60741 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
HCN1O60741 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
HCN1O60741 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
HCN1O60741 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HCN1O60741 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HCN1O60741 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.69■■□□□ 1.54
HCN1O60741 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HCN1O60741 AL162393.1-201ENST00000437852 946 ntBASIC24.68■■□□□ 1.54
HCN1O60741 WASH5P-204ENST00000632292 975 ntBASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms