Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
HCN1O60741 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
HCN1O60741 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.35■■■□□ 2.45
HCN1O60741 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
HCN1O60741 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
HCN1O60741 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
HCN1O60741 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
HCN1O60741 AL356512.1-201ENST00000607453 1739 ntBASIC29.95■■■□□ 2.38
HCN1O60741 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.93■■■□□ 2.38
HCN1O60741 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.82■■■□□ 2.36
HCN1O60741 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
HCN1O60741 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
HCN1O60741 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.49■■■□□ 2.31
HCN1O60741 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.2■■■□□ 2.26
HCN1O60741 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.26
HCN1O60741 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
HCN1O60741 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
HCN1O60741 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.01■■■□□ 2.23
HCN1O60741 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.94■■■□□ 2.22
HCN1O60741 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.91■■■□□ 2.22
HCN1O60741 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
HCN1O60741 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HCN1O60741 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
HCN1O60741 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
HCN1O60741 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.66■■■□□ 2.18
HCN1O60741 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HCN1O60741 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.61■■■□□ 2.17
HCN1O60741 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
HCN1O60741 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
HCN1O60741 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
HCN1O60741 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
HCN1O60741 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HCN1O60741 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
HCN1O60741 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
HCN1O60741 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.22■■■□□ 2.11
HCN1O60741 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HCN1O60741 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HCN1O60741 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
HCN1O60741 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HCN1O60741 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.07■■■□□ 2.08
HCN1O60741 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HCN1O60741 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
HCN1O60741 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
HCN1O60741 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HCN1O60741 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
HCN1O60741 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
HCN1O60741 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.89■■■□□ 2.06
HCN1O60741 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
HCN1O60741 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
HCN1O60741 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.69■■■□□ 2.02
HCN1O60741 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.69■■■□□ 2.02
HCN1O60741 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
HCN1O60741 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.6■■■□□ 2.01
HCN1O60741 AC015813.7-201ENST00000623294 581 ntBASIC27.58■■■□□ 2.01
HCN1O60741 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HCN1O60741 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HCN1O60741 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HCN1O60741 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.48■■□□□ 1.99
HCN1O60741 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.48■■□□□ 1.99
HCN1O60741 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
HCN1O60741 AC006077.2-201ENST00000623591 457 ntBASIC27.46■■□□□ 1.99
HCN1O60741 ZNRF2P1-201ENST00000441407 443 ntBASIC27.37■■□□□ 1.97
HCN1O60741 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.36■■□□□ 1.97
HCN1O60741 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
HCN1O60741 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
HCN1O60741 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HCN1O60741 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
HCN1O60741 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HCN1O60741 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
HCN1O60741 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HCN1O60741 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.15■■□□□ 1.94
HCN1O60741 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HCN1O60741 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
HCN1O60741 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HCN1O60741 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.1■■□□□ 1.93
HCN1O60741 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
HCN1O60741 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
HCN1O60741 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.02■■□□□ 1.92
HCN1O60741 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HCN1O60741 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.97■■□□□ 1.91
HCN1O60741 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
HCN1O60741 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
HCN1O60741 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HCN1O60741 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
HCN1O60741 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
HCN1O60741 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
HCN1O60741 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
HCN1O60741 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HCN1O60741 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
HCN1O60741 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
HCN1O60741 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HCN1O60741 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HCN1O60741 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
HCN1O60741 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
HCN1O60741 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HCN1O60741 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.71■■□□□ 1.87
HCN1O60741 AP002365.1-201ENST00000603448 772 ntBASIC26.69■■□□□ 1.86
HCN1O60741 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
HCN1O60741 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HCN1O60741 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms