Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.27■■□□□ 1.96
TBC1D3FA6NER0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.26■■□□□ 1.96
TBC1D3FA6NER0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.26■■□□□ 1.95
TBC1D3FA6NER0 AC087741.3-201ENST00000624270 1347 ntBASIC27.25■■□□□ 1.95
TBC1D3FA6NER0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
TBC1D3FA6NER0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TBC1D3FA6NER0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
TBC1D3FA6NER0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.24■■□□□ 1.95
TBC1D3FA6NER0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TBC1D3FA6NER0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
TBC1D3FA6NER0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.24■■□□□ 1.95
TBC1D3FA6NER0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
TBC1D3FA6NER0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.23■■□□□ 1.95
TBC1D3FA6NER0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TBC1D3FA6NER0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TBC1D3FA6NER0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.22■■□□□ 1.95
TBC1D3FA6NER0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TBC1D3FA6NER0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TBC1D3FA6NER0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TBC1D3FA6NER0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TBC1D3FA6NER0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TBC1D3FA6NER0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TBC1D3FA6NER0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
TBC1D3FA6NER0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.19■■□□□ 1.94
TBC1D3FA6NER0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TBC1D3FA6NER0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TBC1D3FA6NER0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.17■■□□□ 1.94
TBC1D3FA6NER0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TBC1D3FA6NER0 AC044849.2-201ENST00000606596 710 ntBASIC27.16■■□□□ 1.94
TBC1D3FA6NER0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TBC1D3FA6NER0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
TBC1D3FA6NER0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TBC1D3FA6NER0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TBC1D3FA6NER0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TBC1D3FA6NER0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
TBC1D3FA6NER0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TBC1D3FA6NER0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TBC1D3FA6NER0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.11■■□□□ 1.93
TBC1D3FA6NER0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.1■■□□□ 1.93
TBC1D3FA6NER0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TBC1D3FA6NER0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TBC1D3FA6NER0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.07■■□□□ 1.92
TBC1D3FA6NER0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.06■■□□□ 1.92
TBC1D3FA6NER0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TBC1D3FA6NER0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TBC1D3FA6NER0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TBC1D3FA6NER0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TBC1D3FA6NER0 ABHD17AP4-201ENST00000411545 909 ntBASIC27.05■■□□□ 1.92
TBC1D3FA6NER0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.05■■□□□ 1.92
TBC1D3FA6NER0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TBC1D3FA6NER0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TBC1D3FA6NER0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
TBC1D3FA6NER0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TBC1D3FA6NER0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TBC1D3FA6NER0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.01■■□□□ 1.91
TBC1D3FA6NER0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TBC1D3FA6NER0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27■■□□□ 1.91
TBC1D3FA6NER0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TBC1D3FA6NER0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TBC1D3FA6NER0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TBC1D3FA6NER0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.99■■□□□ 1.91
TBC1D3FA6NER0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TBC1D3FA6NER0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TBC1D3FA6NER0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TBC1D3FA6NER0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D3FA6NER0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
TBC1D3FA6NER0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
TBC1D3FA6NER0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
TBC1D3FA6NER0 MIR7108-201ENST00000614319 87 ntBASIC26.94■■□□□ 1.9
TBC1D3FA6NER0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TBC1D3FA6NER0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TBC1D3FA6NER0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TBC1D3FA6NER0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TBC1D3FA6NER0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.93■■□□□ 1.9
TBC1D3FA6NER0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TBC1D3FA6NER0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
TBC1D3FA6NER0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
TBC1D3FA6NER0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.92■■□□□ 1.9
TBC1D3FA6NER0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.91■■□□□ 1.9
TBC1D3FA6NER0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
TBC1D3FA6NER0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.89■■□□□ 1.9
TBC1D3FA6NER0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TBC1D3FA6NER0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.89■■□□□ 1.9
TBC1D3FA6NER0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.88■■□□□ 1.89
TBC1D3FA6NER0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.88■■□□□ 1.89
TBC1D3FA6NER0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TBC1D3FA6NER0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TBC1D3FA6NER0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.87■■□□□ 1.89
TBC1D3FA6NER0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TBC1D3FA6NER0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TBC1D3FA6NER0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TBC1D3FA6NER0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.86■■□□□ 1.89
TBC1D3FA6NER0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.86■■□□□ 1.89
TBC1D3FA6NER0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TBC1D3FA6NER0 AC120057.4-201ENST00000624722 1615 ntBASIC26.84■■□□□ 1.89
TBC1D3FA6NER0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.83■■□□□ 1.89
TBC1D3FA6NER0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D3FA6NER0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.81■■□□□ 1.88
TBC1D3FA6NER0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TBC1D3FA6NER0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms