Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
TBC1D3FA6NER0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.7■■■□□ 2.99
TBC1D3FA6NER0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
TBC1D3FA6NER0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
TBC1D3FA6NER0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
TBC1D3FA6NER0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
TBC1D3FA6NER0 AL356512.1-201ENST00000607453 1739 ntBASIC33.22■■■□□ 2.91
TBC1D3FA6NER0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.16■■■□□ 2.9
TBC1D3FA6NER0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
TBC1D3FA6NER0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.39■■■□□ 2.78
TBC1D3FA6NER0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.29■■■□□ 2.76
TBC1D3FA6NER0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
TBC1D3FA6NER0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.22■■■□□ 2.75
TBC1D3FA6NER0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.2■■■□□ 2.75
TBC1D3FA6NER0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.14■■■□□ 2.74
TBC1D3FA6NER0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.03■■■□□ 2.72
TBC1D3FA6NER0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
TBC1D3FA6NER0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.86■■■□□ 2.69
TBC1D3FA6NER0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
TBC1D3FA6NER0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TBC1D3FA6NER0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TBC1D3FA6NER0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
TBC1D3FA6NER0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TBC1D3FA6NER0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TBC1D3FA6NER0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TBC1D3FA6NER0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.27■■■□□ 2.6
TBC1D3FA6NER0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.24■■■□□ 2.59
TBC1D3FA6NER0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TBC1D3FA6NER0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
TBC1D3FA6NER0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TBC1D3FA6NER0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.11■■■□□ 2.57
TBC1D3FA6NER0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TBC1D3FA6NER0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TBC1D3FA6NER0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
TBC1D3FA6NER0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.78■■■□□ 2.52
TBC1D3FA6NER0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TBC1D3FA6NER0 AC015813.7-201ENST00000623294 581 ntBASIC30.68■■■□□ 2.5
TBC1D3FA6NER0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
TBC1D3FA6NER0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TBC1D3FA6NER0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.6■■■□□ 2.49
TBC1D3FA6NER0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.58■■■□□ 2.49
TBC1D3FA6NER0 AC006077.2-201ENST00000623591 457 ntBASIC30.56■■■□□ 2.48
TBC1D3FA6NER0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TBC1D3FA6NER0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
TBC1D3FA6NER0 ZNRF2P1-201ENST00000441407 443 ntBASIC30.48■■■□□ 2.47
TBC1D3FA6NER0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
TBC1D3FA6NER0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TBC1D3FA6NER0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TBC1D3FA6NER0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TBC1D3FA6NER0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.2■■■□□ 2.43
TBC1D3FA6NER0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.18■■■□□ 2.42
TBC1D3FA6NER0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
TBC1D3FA6NER0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
TBC1D3FA6NER0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TBC1D3FA6NER0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TBC1D3FA6NER0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30■■■□□ 2.39
TBC1D3FA6NER0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
TBC1D3FA6NER0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
TBC1D3FA6NER0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
TBC1D3FA6NER0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
TBC1D3FA6NER0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TBC1D3FA6NER0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TBC1D3FA6NER0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.79■■■□□ 2.36
TBC1D3FA6NER0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
TBC1D3FA6NER0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TBC1D3FA6NER0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TBC1D3FA6NER0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TBC1D3FA6NER0 AP002365.1-201ENST00000603448 772 ntBASIC29.74■■■□□ 2.35
TBC1D3FA6NER0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.72■■■□□ 2.35
TBC1D3FA6NER0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TBC1D3FA6NER0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TBC1D3FA6NER0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TBC1D3FA6NER0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
TBC1D3FA6NER0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.56■■■□□ 2.32
TBC1D3FA6NER0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.55■■■□□ 2.32
TBC1D3FA6NER0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.54■■■□□ 2.32
TBC1D3FA6NER0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.54■■■□□ 2.32
TBC1D3FA6NER0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.53■■■□□ 2.32
TBC1D3FA6NER0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.52■■■□□ 2.32
TBC1D3FA6NER0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
TBC1D3FA6NER0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.49■■■□□ 2.31
TBC1D3FA6NER0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TBC1D3FA6NER0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
TBC1D3FA6NER0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.44■■■□□ 2.3
TBC1D3FA6NER0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TBC1D3FA6NER0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.38■■■□□ 2.29
TBC1D3FA6NER0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
TBC1D3FA6NER0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.33■■■□□ 2.29
TBC1D3FA6NER0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
TBC1D3FA6NER0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TBC1D3FA6NER0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
TBC1D3FA6NER0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TBC1D3FA6NER0 DYNLL1-208ENST00000550178 581 ntBASIC29.31■■■□□ 2.28
TBC1D3FA6NER0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.31■■■□□ 2.28
TBC1D3FA6NER0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
TBC1D3FA6NER0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D3FA6NER0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
TBC1D3FA6NER0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.21■■■□□ 2.27
TBC1D3FA6NER0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TBC1D3FA6NER0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms