Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SCN2BO60939 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 SEMA4D-213ENST00000455551 3594 ntTSL 5 BASIC11.83□□□□□ -0.52
SCN2BO60939 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 NOL10-201ENST00000345985 3333 ntTSL 2 BASIC11.83□□□□□ -0.52
SCN2BO60939 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
SCN2BO60939 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC11.83□□□□□ -0.52
SCN2BO60939 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCN2BO60939 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AL391294.1-201ENST00000641352 4068 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 HERC2P10-201ENST00000570209 2393 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 AC122129.1-201ENST00000354746 1815 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 PGAM1P11-201ENST00000416729 680 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SCN2BO60939 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 PSME2P2-201ENST00000453033 700 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 RNASEH2CP1-201ENST00000454281 502 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC11.82□□□□□ -0.52
SCN2BO60939 AC010395.2-201ENST00000509899 904 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 AC126471.1-201ENST00000550676 362 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC11.82□□□□□ -0.52
SCN2BO60939 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC11.82□□□□□ -0.52
SCN2BO60939 AL353593.1-201ENST00000602517 3955 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AC073263.2-201ENST00000624835 1863 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AC099521.2-201ENST00000619354 2036 ntBASIC11.82□□□□□ -0.52
SCN2BO60939 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SCN2BO60939 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SCN2BO60939 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCN2BO60939 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SCN2BO60939 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SCN2BO60939 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SCN2BO60939 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms