RNA–Protein interactions for RNA: ENST00000614302.4

ACSF3-218, Transcript of acyl-CoA synthetase family member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACSF3, Length 3,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-218ENST00000614302 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.37
ACSF3-218ENST00000614302 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
ACSF3-218ENST00000614302 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
ACSF3-218ENST00000614302 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
ACSF3-218ENST00000614302 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
ACSF3-218ENST00000614302 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
ACSF3-218ENST00000614302 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
ACSF3-218ENST00000614302 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
ACSF3-218ENST00000614302 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
ACSF3-218ENST00000614302 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
ACSF3-218ENST00000614302 PPARGC1BQ86YN6 1023 aaKnown RBP20.02■□□□□ 0.8
ACSF3-218ENST00000614302 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
ACSF3-218ENST00000614302 HRCP23327 699 aa19.94■□□□□ 0.78
ACSF3-218ENST00000614302 ABCC9O60706 1549 aa19.85■□□□□ 0.77
ACSF3-218ENST00000614302 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
ACSF3-218ENST00000614302 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
ACSF3-218ENST00000614302 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
ACSF3-218ENST00000614302 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
ACSF3-218ENST00000614302 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.73
ACSF3-218ENST00000614302 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
ACSF3-218ENST00000614302 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
ACSF3-218ENST00000614302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
ACSF3-218ENST00000614302 ZEB1P37275 1124 aaPredicted RBP19.28■□□□□ 0.68
ACSF3-218ENST00000614302 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
ACSF3-218ENST00000614302 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
ACSF3-218ENST00000614302 APLP2Q06481 763 aa19.16■□□□□ 0.66
ACSF3-218ENST00000614302 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
ACSF3-218ENST00000614302 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
ACSF3-218ENST00000614302 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
ACSF3-218ENST00000614302 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
ACSF3-218ENST00000614302 ATP1B4Q9UN42 357 aaPredicted RBP18.84■□□□□ 0.61
ACSF3-218ENST00000614302 ITGAEP38570 1179 aa18.81■□□□□ 0.6
ACSF3-218ENST00000614302 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
ACSF3-218ENST00000614302 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
ACSF3-218ENST00000614302 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
ACSF3-218ENST00000614302 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
ACSF3-218ENST00000614302 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
ACSF3-218ENST00000614302 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
ACSF3-218ENST00000614302 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
ACSF3-218ENST00000614302 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
ACSF3-218ENST00000614302 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
ACSF3-218ENST00000614302 ACIN1Q9UKV3 1341 aaKnown RBP18.42■□□□□ 0.54
ACSF3-218ENST00000614302 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
ACSF3-218ENST00000614302 SOGA1O94964 1423 aa18.38■□□□□ 0.53
ACSF3-218ENST00000614302 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
ACSF3-218ENST00000614302 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
ACSF3-218ENST00000614302 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
ACSF3-218ENST00000614302 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
ACSF3-218ENST00000614302 WIZO95785 1651 aa18.34■□□□□ 0.53
ACSF3-218ENST00000614302 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
ACSF3-218ENST00000614302 NACADO15069 1562 aa18.3■□□□□ 0.52
ACSF3-218ENST00000614302 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
ACSF3-218ENST00000614302 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
ACSF3-218ENST00000614302 MIER1Q8N108 512 aa18.23■□□□□ 0.51
ACSF3-218ENST00000614302 CNGB1Q14028 1251 aaPredicted RBP18.17■□□□□ 0.5
ACSF3-218ENST00000614302 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
ACSF3-218ENST00000614302 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
ACSF3-218ENST00000614302 CLIP1P30622 1438 aa18.15■□□□□ 0.5
ACSF3-218ENST00000614302 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
ACSF3-218ENST00000614302 TNIKQ9UKE5 1360 aa18.12■□□□□ 0.49
ACSF3-218ENST00000614302 BCANQ96GW7 911 aa18.1■□□□□ 0.49
ACSF3-218ENST00000614302 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
ACSF3-218ENST00000614302 HIRIP3Q9BW71 556 aaPredicted RBP18.04■□□□□ 0.48
ACSF3-218ENST00000614302 FBLN2P98095 1184 aa18■□□□□ 0.47
ACSF3-218ENST00000614302 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
ACSF3-218ENST00000614302 NEFLP07196 543 aa17.95■□□□□ 0.46
ACSF3-218ENST00000614302 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
ACSF3-218ENST00000614302 EEA1Q15075 1411 aa17.93■□□□□ 0.46
ACSF3-218ENST00000614302 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
ACSF3-218ENST00000614302 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
ACSF3-218ENST00000614302 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
ACSF3-218ENST00000614302 TRIM52Q96A61 297 aa17.87■□□□□ 0.45
ACSF3-218ENST00000614302 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
ACSF3-218ENST00000614302 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
ACSF3-218ENST00000614302 SIN3AQ96ST3 1273 aa17.81■□□□□ 0.44
ACSF3-218ENST00000614302 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
ACSF3-218ENST00000614302 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
ACSF3-218ENST00000614302 CHIC2Q9UKJ5 165 aa17.77■□□□□ 0.44
ACSF3-218ENST00000614302 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
ACSF3-218ENST00000614302 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
ACSF3-218ENST00000614302 ANP32CO43423 234 aa17.72■□□□□ 0.43
ACSF3-218ENST00000614302 ZNF326Q5BKZ1 582 aaKnown RBP17.71■□□□□ 0.43
ACSF3-218ENST00000614302 FKBP8Q14318 412 aa17.69■□□□□ 0.42
ACSF3-218ENST00000614302 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
ACSF3-218ENST00000614302 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
ACSF3-218ENST00000614302 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.42
ACSF3-218ENST00000614302 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
ACSF3-218ENST00000614302 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
ACSF3-218ENST00000614302 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
ACSF3-218ENST00000614302 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
ACSF3-218ENST00000614302 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
ACSF3-218ENST00000614302 TONSLQ96HA7 1378 aa17.58■□□□□ 0.4
ACSF3-218ENST00000614302 CUX2O14529 1486 aa17.58■□□□□ 0.4
ACSF3-218ENST00000614302 ZNF777Q9ULD5 760 aaPredicted RBP17.57■□□□□ 0.4
ACSF3-218ENST00000614302 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
ACSF3-218ENST00000614302 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
ACSF3-218ENST00000614302 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
ACSF3-218ENST00000614302 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
ACSF3-218ENST00000614302 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
ACSF3-218ENST00000614302 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms