RNA–Protein interactions for RNA: ENST00000435085.5

LRTOMT-207, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRTOMT, Length 3,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-207ENST00000435085 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
LRTOMT-207ENST00000435085 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
LRTOMT-207ENST00000435085 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
LRTOMT-207ENST00000435085 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
LRTOMT-207ENST00000435085 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
LRTOMT-207ENST00000435085 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
LRTOMT-207ENST00000435085 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
LRTOMT-207ENST00000435085 ABCC9O60706 1549 aa20.99■□□□□ 0.95
LRTOMT-207ENST00000435085 MYO15BQ96JP2 1530 aa20.81■□□□□ 0.92
LRTOMT-207ENST00000435085 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
LRTOMT-207ENST00000435085 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
LRTOMT-207ENST00000435085 NACADO15069 1562 aa20.55■□□□□ 0.88
LRTOMT-207ENST00000435085 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
LRTOMT-207ENST00000435085 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
LRTOMT-207ENST00000435085 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
LRTOMT-207ENST00000435085 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
LRTOMT-207ENST00000435085 WIZO95785 1651 aa19.98■□□□□ 0.79
LRTOMT-207ENST00000435085 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
LRTOMT-207ENST00000435085 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
LRTOMT-207ENST00000435085 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
LRTOMT-207ENST00000435085 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
LRTOMT-207ENST00000435085 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
LRTOMT-207ENST00000435085 SMARCA4P51532 1647 aa19.78■□□□□ 0.76
LRTOMT-207ENST00000435085 PCGF6Q9BYE7 350 aa19.78■□□□□ 0.76
LRTOMT-207ENST00000435085 HRCP23327 699 aa19.73■□□□□ 0.75
LRTOMT-207ENST00000435085 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
LRTOMT-207ENST00000435085 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
LRTOMT-207ENST00000435085 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
LRTOMT-207ENST00000435085 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
LRTOMT-207ENST00000435085 SMARCA2P51531 1590 aa19.58■□□□□ 0.72
LRTOMT-207ENST00000435085 CCDC88BA6NC98 1476 aa19.57■□□□□ 0.72
LRTOMT-207ENST00000435085 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
LRTOMT-207ENST00000435085 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
LRTOMT-207ENST00000435085 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
LRTOMT-207ENST00000435085 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
LRTOMT-207ENST00000435085 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
LRTOMT-207ENST00000435085 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
LRTOMT-207ENST00000435085 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
LRTOMT-207ENST00000435085 EEA1Q15075 1411 aa19.22■□□□□ 0.67
LRTOMT-207ENST00000435085 SOGA1O94964 1423 aa19.19■□□□□ 0.66
LRTOMT-207ENST00000435085 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
LRTOMT-207ENST00000435085 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
LRTOMT-207ENST00000435085 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
LRTOMT-207ENST00000435085 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
LRTOMT-207ENST00000435085 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
LRTOMT-207ENST00000435085 SYNJ1O43426 1573 aa19.08■□□□□ 0.64
LRTOMT-207ENST00000435085 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
LRTOMT-207ENST00000435085 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
LRTOMT-207ENST00000435085 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
LRTOMT-207ENST00000435085 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
LRTOMT-207ENST00000435085 HMGXB3Q12766 1538 aa19■□□□□ 0.63
LRTOMT-207ENST00000435085 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
LRTOMT-207ENST00000435085 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
LRTOMT-207ENST00000435085 KIF21BO75037 1637 aa18.95■□□□□ 0.62
LRTOMT-207ENST00000435085 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
LRTOMT-207ENST00000435085 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
LRTOMT-207ENST00000435085 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
LRTOMT-207ENST00000435085 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
LRTOMT-207ENST00000435085 CLIP1P30622 1438 aa18.76■□□□□ 0.59
LRTOMT-207ENST00000435085 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
LRTOMT-207ENST00000435085 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
LRTOMT-207ENST00000435085 CFTRP13569 1480 aa18.76■□□□□ 0.59
LRTOMT-207ENST00000435085 CUX1P39880 1505 aa18.72■□□□□ 0.59
LRTOMT-207ENST00000435085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
LRTOMT-207ENST00000435085 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
LRTOMT-207ENST00000435085 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
LRTOMT-207ENST00000435085 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
LRTOMT-207ENST00000435085 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
LRTOMT-207ENST00000435085 PRXQ9BXM0 1461 aa18.64■□□□□ 0.58
LRTOMT-207ENST00000435085 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
LRTOMT-207ENST00000435085 APLP2Q06481 763 aa18.57■□□□□ 0.56
LRTOMT-207ENST00000435085 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
LRTOMT-207ENST00000435085 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
LRTOMT-207ENST00000435085 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
LRTOMT-207ENST00000435085 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
LRTOMT-207ENST00000435085 CUX2O14529 1486 aa18.45■□□□□ 0.54
LRTOMT-207ENST00000435085 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
LRTOMT-207ENST00000435085 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
LRTOMT-207ENST00000435085 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
LRTOMT-207ENST00000435085 IGF1RP08069 1367 aa18.38■□□□□ 0.53
LRTOMT-207ENST00000435085 MYT1Q01538 1121 aa18.35■□□□□ 0.53
LRTOMT-207ENST00000435085 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
LRTOMT-207ENST00000435085 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
LRTOMT-207ENST00000435085 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
LRTOMT-207ENST00000435085 NESP48681 1621 aa18.3■□□□□ 0.52
LRTOMT-207ENST00000435085 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
LRTOMT-207ENST00000435085 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
LRTOMT-207ENST00000435085 ABCA10Q8WWZ4 1543 aa18.24■□□□□ 0.51
LRTOMT-207ENST00000435085 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
LRTOMT-207ENST00000435085 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
LRTOMT-207ENST00000435085 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
LRTOMT-207ENST00000435085 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
LRTOMT-207ENST00000435085 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
LRTOMT-207ENST00000435085 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
LRTOMT-207ENST00000435085 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
LRTOMT-207ENST00000435085 CUL7Q14999 1698 aa18.16■□□□□ 0.5
LRTOMT-207ENST00000435085 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
LRTOMT-207ENST00000435085 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
LRTOMT-207ENST00000435085 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
LRTOMT-207ENST00000435085 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms