RNA–Protein interactions for RNA: ENST00000416729.2

PGAM1P11-201, Transcript of phosphoglycerate mutase 1 pseudogene 11, humanhuman

BASIC

Gene PGAM1P11, Length 680 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P11-201ENST00000416729 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
PGAM1P11-201ENST00000416729 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
PGAM1P11-201ENST00000416729 ABCC9O60706 1549 aa29.28■■■□□ 2.28
PGAM1P11-201ENST00000416729 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
PGAM1P11-201ENST00000416729 NACADO15069 1562 aa27.76■■■□□ 2.03
PGAM1P11-201ENST00000416729 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
PGAM1P11-201ENST00000416729 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
PGAM1P11-201ENST00000416729 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
PGAM1P11-201ENST00000416729 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
PGAM1P11-201ENST00000416729 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
PGAM1P11-201ENST00000416729 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
PGAM1P11-201ENST00000416729 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
PGAM1P11-201ENST00000416729 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
PGAM1P11-201ENST00000416729 SCRIBQ14160 1630 aa26.85■■□□□ 1.89
PGAM1P11-201ENST00000416729 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
PGAM1P11-201ENST00000416729 EIF4G1Q04637 1599 aaKnown RBP26.44■■□□□ 1.82
PGAM1P11-201ENST00000416729 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
PGAM1P11-201ENST00000416729 CECR2Q9BXF3 1484 aa26.34■■□□□ 1.81
PGAM1P11-201ENST00000416729 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
PGAM1P11-201ENST00000416729 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
PGAM1P11-201ENST00000416729 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
PGAM1P11-201ENST00000416729 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
PGAM1P11-201ENST00000416729 SMARCA2P51531 1590 aa25.51■■□□□ 1.67
PGAM1P11-201ENST00000416729 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
PGAM1P11-201ENST00000416729 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
PGAM1P11-201ENST00000416729 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
PGAM1P11-201ENST00000416729 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
PGAM1P11-201ENST00000416729 NESP48681 1621 aa25.25■■□□□ 1.63
PGAM1P11-201ENST00000416729 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
PGAM1P11-201ENST00000416729 WIZO95785 1651 aa25.09■■□□□ 1.61
PGAM1P11-201ENST00000416729 CUX2O14529 1486 aa25.09■■□□□ 1.61
PGAM1P11-201ENST00000416729 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
PGAM1P11-201ENST00000416729 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
PGAM1P11-201ENST00000416729 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
PGAM1P11-201ENST00000416729 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
PGAM1P11-201ENST00000416729 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.58
PGAM1P11-201ENST00000416729 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
PGAM1P11-201ENST00000416729 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
PGAM1P11-201ENST00000416729 TOP2AP11388 1531 aaKnown RBP24.78■■□□□ 1.56
PGAM1P11-201ENST00000416729 CFTRP13569 1480 aa24.69■■□□□ 1.54
PGAM1P11-201ENST00000416729 MRC2Q9UBG0 1479 aa24.66■■□□□ 1.54
PGAM1P11-201ENST00000416729 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
PGAM1P11-201ENST00000416729 WDR62O43379 1518 aa24.61■■□□□ 1.53
PGAM1P11-201ENST00000416729 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
PGAM1P11-201ENST00000416729 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
PGAM1P11-201ENST00000416729 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.5
PGAM1P11-201ENST00000416729 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
PGAM1P11-201ENST00000416729 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
PGAM1P11-201ENST00000416729 ZNF608Q9ULD9 1512 aaPredicted RBP24.12■■□□□ 1.45
PGAM1P11-201ENST00000416729 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
PGAM1P11-201ENST00000416729 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
PGAM1P11-201ENST00000416729 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
PGAM1P11-201ENST00000416729 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
PGAM1P11-201ENST00000416729 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
PGAM1P11-201ENST00000416729 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
PGAM1P11-201ENST00000416729 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
PGAM1P11-201ENST00000416729 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
PGAM1P11-201ENST00000416729 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.42
PGAM1P11-201ENST00000416729 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
PGAM1P11-201ENST00000416729 CUX1P39880 1505 aa23.88■■□□□ 1.41
PGAM1P11-201ENST00000416729 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
PGAM1P11-201ENST00000416729 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
PGAM1P11-201ENST00000416729 SOGA1O94964 1423 aa23.84■■□□□ 1.41
PGAM1P11-201ENST00000416729 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
PGAM1P11-201ENST00000416729 RIMBP3CA6NJZ7 1639 aa23.65■■□□□ 1.38
PGAM1P11-201ENST00000416729 RIMBP3BA6NNM3 1639 aa23.65■■□□□ 1.38
PGAM1P11-201ENST00000416729 RIMBP3Q9UFD9 1639 aa23.65■■□□□ 1.38
PGAM1P11-201ENST00000416729 CHD1O14646 1710 aa23.64■■□□□ 1.38
PGAM1P11-201ENST00000416729 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.38
PGAM1P11-201ENST00000416729 FBLN2P98095 1184 aa23.64■■□□□ 1.37
PGAM1P11-201ENST00000416729 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
PGAM1P11-201ENST00000416729 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
PGAM1P11-201ENST00000416729 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
PGAM1P11-201ENST00000416729 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
PGAM1P11-201ENST00000416729 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
PGAM1P11-201ENST00000416729 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
PGAM1P11-201ENST00000416729 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.36
PGAM1P11-201ENST00000416729 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
PGAM1P11-201ENST00000416729 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
PGAM1P11-201ENST00000416729 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
PGAM1P11-201ENST00000416729 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
PGAM1P11-201ENST00000416729 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
PGAM1P11-201ENST00000416729 CLASP1Q7Z460 1538 aa23.48■■□□□ 1.35
PGAM1P11-201ENST00000416729 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
PGAM1P11-201ENST00000416729 CYB5RLQ6IPT4 315 aa23.45■■□□□ 1.34
PGAM1P11-201ENST00000416729 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
PGAM1P11-201ENST00000416729 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
PGAM1P11-201ENST00000416729 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
PGAM1P11-201ENST00000416729 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
PGAM1P11-201ENST00000416729 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
PGAM1P11-201ENST00000416729 NUP160Q12769 1436 aa23.25■■□□□ 1.31
PGAM1P11-201ENST00000416729 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
PGAM1P11-201ENST00000416729 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
PGAM1P11-201ENST00000416729 ERCC6L2Q5T890 1561 aa23.17■■□□□ 1.3
PGAM1P11-201ENST00000416729 IGF1RP08069 1367 aa23.09■■□□□ 1.29
PGAM1P11-201ENST00000416729 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
PGAM1P11-201ENST00000416729 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
PGAM1P11-201ENST00000416729 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
PGAM1P11-201ENST00000416729 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
PGAM1P11-201ENST00000416729 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms