RNA–Protein interactions for RNA: ENST00000309117.10

DSCR3-201, Transcript of Down syndrome critical region protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSCR3, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSCR3-201ENST00000309117 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
DSCR3-201ENST00000309117 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
DSCR3-201ENST00000309117 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
DSCR3-201ENST00000309117 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
DSCR3-201ENST00000309117 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
DSCR3-201ENST00000309117 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
DSCR3-201ENST00000309117 HRCP23327 699 aa20.62■□□□□ 0.89
DSCR3-201ENST00000309117 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
DSCR3-201ENST00000309117 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
DSCR3-201ENST00000309117 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
DSCR3-201ENST00000309117 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
DSCR3-201ENST00000309117 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
DSCR3-201ENST00000309117 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
DSCR3-201ENST00000309117 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
DSCR3-201ENST00000309117 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
DSCR3-201ENST00000309117 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
DSCR3-201ENST00000309117 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
DSCR3-201ENST00000309117 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
DSCR3-201ENST00000309117 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
DSCR3-201ENST00000309117 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
DSCR3-201ENST00000309117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
DSCR3-201ENST00000309117 PELP1Q8IZL8 1130 aaKnown RBP19.27■□□□□ 0.67
DSCR3-201ENST00000309117 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
DSCR3-201ENST00000309117 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
DSCR3-201ENST00000309117 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
DSCR3-201ENST00000309117 ABCC9O60706 1549 aa19.14■□□□□ 0.65
DSCR3-201ENST00000309117 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.64
DSCR3-201ENST00000309117 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
DSCR3-201ENST00000309117 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
DSCR3-201ENST00000309117 RSF1Q96T23 1441 aaPredicted RBP18.99■□□□□ 0.63
DSCR3-201ENST00000309117 DIEXFQ68CQ4 756 aaKnown RBP18.98■□□□□ 0.63
DSCR3-201ENST00000309117 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
DSCR3-201ENST00000309117 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
DSCR3-201ENST00000309117 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
DSCR3-201ENST00000309117 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
DSCR3-201ENST00000309117 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
DSCR3-201ENST00000309117 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
DSCR3-201ENST00000309117 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.58
DSCR3-201ENST00000309117 WIZO95785 1651 aa18.56■□□□□ 0.56
DSCR3-201ENST00000309117 MIER1Q8N108 512 aa18.56■□□□□ 0.56
DSCR3-201ENST00000309117 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
DSCR3-201ENST00000309117 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
DSCR3-201ENST00000309117 NACADO15069 1562 aa18.51■□□□□ 0.55
DSCR3-201ENST00000309117 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
DSCR3-201ENST00000309117 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
DSCR3-201ENST00000309117 SOGA1O94964 1423 aa18.31■□□□□ 0.52
DSCR3-201ENST00000309117 MYT1Q01538 1121 aa18.31■□□□□ 0.52
DSCR3-201ENST00000309117 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
DSCR3-201ENST00000309117 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
DSCR3-201ENST00000309117 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
DSCR3-201ENST00000309117 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
DSCR3-201ENST00000309117 APLP2Q06481 763 aa18.25■□□□□ 0.51
DSCR3-201ENST00000309117 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
DSCR3-201ENST00000309117 BCANQ96GW7 911 aa18.18■□□□□ 0.5
DSCR3-201ENST00000309117 ITGAEP38570 1179 aa18.16■□□□□ 0.5
DSCR3-201ENST00000309117 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
DSCR3-201ENST00000309117 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
DSCR3-201ENST00000309117 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.48
DSCR3-201ENST00000309117 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
DSCR3-201ENST00000309117 SUPT16HQ9Y5B9 1047 aaKnown RBP18.06■□□□□ 0.48
DSCR3-201ENST00000309117 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
DSCR3-201ENST00000309117 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
DSCR3-201ENST00000309117 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
DSCR3-201ENST00000309117 CLIP1P30622 1438 aa17.92■□□□□ 0.46
DSCR3-201ENST00000309117 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
DSCR3-201ENST00000309117 TSHZ2Q9NRE2 1034 aa17.9■□□□□ 0.46
DSCR3-201ENST00000309117 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
DSCR3-201ENST00000309117 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
DSCR3-201ENST00000309117 FKBP8Q14318 412 aa17.84■□□□□ 0.45
DSCR3-201ENST00000309117 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
DSCR3-201ENST00000309117 EEA1Q15075 1411 aa17.8■□□□□ 0.44
DSCR3-201ENST00000309117 DDX10Q13206 875 aaKnown RBP17.8■□□□□ 0.44
DSCR3-201ENST00000309117 TRIM52Q96A61 297 aa17.77■□□□□ 0.43
DSCR3-201ENST00000309117 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.43
DSCR3-201ENST00000309117 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
DSCR3-201ENST00000309117 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
DSCR3-201ENST00000309117 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
DSCR3-201ENST00000309117 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
DSCR3-201ENST00000309117 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
DSCR3-201ENST00000309117 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
DSCR3-201ENST00000309117 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
DSCR3-201ENST00000309117 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
DSCR3-201ENST00000309117 SIN3AQ96ST3 1273 aa17.67■□□□□ 0.42
DSCR3-201ENST00000309117 KIF21BO75037 1637 aa17.65■□□□□ 0.42
DSCR3-201ENST00000309117 NEFLP07196 543 aa17.65■□□□□ 0.42
DSCR3-201ENST00000309117 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
DSCR3-201ENST00000309117 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
DSCR3-201ENST00000309117 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.42
DSCR3-201ENST00000309117 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
DSCR3-201ENST00000309117 P3H3Q8IVL6 736 aa17.59■□□□□ 0.41
DSCR3-201ENST00000309117 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
DSCR3-201ENST00000309117 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
DSCR3-201ENST00000309117 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
DSCR3-201ENST00000309117 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
DSCR3-201ENST00000309117 ANP32CO43423 234 aa17.45■□□□□ 0.38
DSCR3-201ENST00000309117 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
DSCR3-201ENST00000309117 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
DSCR3-201ENST00000309117 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
DSCR3-201ENST00000309117 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.38
DSCR3-201ENST00000309117 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms