RNA–Protein interactions for RNA: ENST00000291535.11

UBASH3A-201, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3A, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-201ENST00000291535 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
UBASH3A-201ENST00000291535 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
UBASH3A-201ENST00000291535 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
UBASH3A-201ENST00000291535 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
UBASH3A-201ENST00000291535 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
UBASH3A-201ENST00000291535 ABCC9O60706 1549 aa20.51■□□□□ 0.87
UBASH3A-201ENST00000291535 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
UBASH3A-201ENST00000291535 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
UBASH3A-201ENST00000291535 HRCP23327 699 aa20.36■□□□□ 0.85
UBASH3A-201ENST00000291535 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
UBASH3A-201ENST00000291535 PCGF6Q9BYE7 350 aa20.02■□□□□ 0.79
UBASH3A-201ENST00000291535 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
UBASH3A-201ENST00000291535 PPARGC1BQ86YN6 1023 aaKnown RBP19.78■□□□□ 0.76
UBASH3A-201ENST00000291535 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
UBASH3A-201ENST00000291535 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
UBASH3A-201ENST00000291535 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
UBASH3A-201ENST00000291535 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
UBASH3A-201ENST00000291535 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
UBASH3A-201ENST00000291535 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
UBASH3A-201ENST00000291535 NACADO15069 1562 aa19.34■□□□□ 0.69
UBASH3A-201ENST00000291535 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
UBASH3A-201ENST00000291535 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
UBASH3A-201ENST00000291535 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
UBASH3A-201ENST00000291535 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.65
UBASH3A-201ENST00000291535 FAM9AQ8IZU1 332 aaPredicted RBP19.08■□□□□ 0.64
UBASH3A-201ENST00000291535 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
UBASH3A-201ENST00000291535 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
UBASH3A-201ENST00000291535 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
UBASH3A-201ENST00000291535 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
UBASH3A-201ENST00000291535 WIZO95785 1651 aa18.95■□□□□ 0.62
UBASH3A-201ENST00000291535 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
UBASH3A-201ENST00000291535 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
UBASH3A-201ENST00000291535 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
UBASH3A-201ENST00000291535 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
UBASH3A-201ENST00000291535 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
UBASH3A-201ENST00000291535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
UBASH3A-201ENST00000291535 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
UBASH3A-201ENST00000291535 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
UBASH3A-201ENST00000291535 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
UBASH3A-201ENST00000291535 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
UBASH3A-201ENST00000291535 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
UBASH3A-201ENST00000291535 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
UBASH3A-201ENST00000291535 CEP162Q5TB80 1403 aa18.61■□□□□ 0.57
UBASH3A-201ENST00000291535 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
UBASH3A-201ENST00000291535 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
UBASH3A-201ENST00000291535 NEUROD1Q13562 356 aa18.57■□□□□ 0.56
UBASH3A-201ENST00000291535 EEA1Q15075 1411 aa18.56■□□□□ 0.56
UBASH3A-201ENST00000291535 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
UBASH3A-201ENST00000291535 SOGA1O94964 1423 aa18.53■□□□□ 0.56
UBASH3A-201ENST00000291535 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
UBASH3A-201ENST00000291535 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
UBASH3A-201ENST00000291535 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
UBASH3A-201ENST00000291535 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
UBASH3A-201ENST00000291535 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
UBASH3A-201ENST00000291535 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.53
UBASH3A-201ENST00000291535 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
UBASH3A-201ENST00000291535 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
UBASH3A-201ENST00000291535 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
UBASH3A-201ENST00000291535 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
UBASH3A-201ENST00000291535 KIF21BO75037 1637 aa18.3■□□□□ 0.52
UBASH3A-201ENST00000291535 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
UBASH3A-201ENST00000291535 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
UBASH3A-201ENST00000291535 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
UBASH3A-201ENST00000291535 CLIP1P30622 1438 aa18.19■□□□□ 0.5
UBASH3A-201ENST00000291535 VPS8Q8N3P4 1428 aa18.19■□□□□ 0.5
UBASH3A-201ENST00000291535 MIER1Q8N108 512 aa18.11■□□□□ 0.49
UBASH3A-201ENST00000291535 MYT1Q01538 1121 aa18.11■□□□□ 0.49
UBASH3A-201ENST00000291535 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
UBASH3A-201ENST00000291535 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.48
UBASH3A-201ENST00000291535 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
UBASH3A-201ENST00000291535 CLSPNQ9HAW4 1339 aa18.02■□□□□ 0.48
UBASH3A-201ENST00000291535 TOP2BQ02880 1626 aa18■□□□□ 0.47
UBASH3A-201ENST00000291535 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
UBASH3A-201ENST00000291535 APLP2Q06481 763 aa17.96■□□□□ 0.47
UBASH3A-201ENST00000291535 ERICH3Q5RHP9 1530 aa17.96■□□□□ 0.46
UBASH3A-201ENST00000291535 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
UBASH3A-201ENST00000291535 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
UBASH3A-201ENST00000291535 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
UBASH3A-201ENST00000291535 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
UBASH3A-201ENST00000291535 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
UBASH3A-201ENST00000291535 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
UBASH3A-201ENST00000291535 CUX2O14529 1486 aa17.86■□□□□ 0.45
UBASH3A-201ENST00000291535 HMGXB3Q12766 1538 aa17.83■□□□□ 0.44
UBASH3A-201ENST00000291535 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
UBASH3A-201ENST00000291535 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
UBASH3A-201ENST00000291535 CUX1P39880 1505 aa17.73■□□□□ 0.43
UBASH3A-201ENST00000291535 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
UBASH3A-201ENST00000291535 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
UBASH3A-201ENST00000291535 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
UBASH3A-201ENST00000291535 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
UBASH3A-201ENST00000291535 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
UBASH3A-201ENST00000291535 NESP48681 1621 aa17.66■□□□□ 0.42
UBASH3A-201ENST00000291535 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
UBASH3A-201ENST00000291535 CFTRP13569 1480 aa17.62■□□□□ 0.41
UBASH3A-201ENST00000291535 MAPKBP1O60336 1514 aa17.61■□□□□ 0.41
UBASH3A-201ENST00000291535 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
UBASH3A-201ENST00000291535 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
UBASH3A-201ENST00000291535 TIAM1Q13009 1591 aa17.55■□□□□ 0.4
UBASH3A-201ENST00000291535 IGF1RP08069 1367 aa17.52■□□□□ 0.4
UBASH3A-201ENST00000291535 SETD5Q9C0A6 1442 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms