RNA–Protein interactions for RNA: ENST00000491511.6

NXPE3-205, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NXPE3, Length 8,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-205ENST00000491511 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
NXPE3-205ENST00000491511 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
NXPE3-205ENST00000491511 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
NXPE3-205ENST00000491511 MYT1Q01538 1121 aa18.84■□□□□ 0.61
NXPE3-205ENST00000491511 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
NXPE3-205ENST00000491511 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
NXPE3-205ENST00000491511 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
NXPE3-205ENST00000491511 APLP2Q06481 763 aa18.49■□□□□ 0.55
NXPE3-205ENST00000491511 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
NXPE3-205ENST00000491511 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
NXPE3-205ENST00000491511 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
NXPE3-205ENST00000491511 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
NXPE3-205ENST00000491511 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
NXPE3-205ENST00000491511 NEFLP07196 543 aa18.09■□□□□ 0.49
NXPE3-205ENST00000491511 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
NXPE3-205ENST00000491511 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
NXPE3-205ENST00000491511 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
NXPE3-205ENST00000491511 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
NXPE3-205ENST00000491511 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
NXPE3-205ENST00000491511 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
NXPE3-205ENST00000491511 HRCP23327 699 aa17.47■□□□□ 0.39
NXPE3-205ENST00000491511 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
NXPE3-205ENST00000491511 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
NXPE3-205ENST00000491511 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
NXPE3-205ENST00000491511 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
NXPE3-205ENST00000491511 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
NXPE3-205ENST00000491511 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
NXPE3-205ENST00000491511 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
NXPE3-205ENST00000491511 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
NXPE3-205ENST00000491511 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
NXPE3-205ENST00000491511 CDK11AQ9UQ88 783 aaPredicted RBP16.89■□□□□ 0.29
NXPE3-205ENST00000491511 ITGAEP38570 1179 aa16.87■□□□□ 0.29
NXPE3-205ENST00000491511 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
NXPE3-205ENST00000491511 GTF3C3Q9Y5Q9 886 aa16.83■□□□□ 0.28
NXPE3-205ENST00000491511 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
NXPE3-205ENST00000491511 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
NXPE3-205ENST00000491511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
NXPE3-205ENST00000491511 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
NXPE3-205ENST00000491511 ANP32CO43423 234 aa16.7■□□□□ 0.26
NXPE3-205ENST00000491511 GLIPR1L2Q4G1C9 344 aa16.69■□□□□ 0.26
NXPE3-205ENST00000491511 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
NXPE3-205ENST00000491511 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
NXPE3-205ENST00000491511 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
NXPE3-205ENST00000491511 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
NXPE3-205ENST00000491511 BCANQ96GW7 911 aa16.62■□□□□ 0.25
NXPE3-205ENST00000491511 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
NXPE3-205ENST00000491511 ANP32BQ92688 251 aaKnown RBP16.56■□□□□ 0.24
NXPE3-205ENST00000491511 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
NXPE3-205ENST00000491511 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
NXPE3-205ENST00000491511 CANXP27824 592 aaKnown RBP16.45■□□□□ 0.22
NXPE3-205ENST00000491511 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
NXPE3-205ENST00000491511 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
NXPE3-205ENST00000491511 NEFMP07197 916 aa16.35■□□□□ 0.21
NXPE3-205ENST00000491511 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
NXPE3-205ENST00000491511 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
NXPE3-205ENST00000491511 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
NXPE3-205ENST00000491511 FKBP8Q14318 412 aa16.24■□□□□ 0.19
NXPE3-205ENST00000491511 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
NXPE3-205ENST00000491511 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
NXPE3-205ENST00000491511 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
NXPE3-205ENST00000491511 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
NXPE3-205ENST00000491511 NBR1Q14596 966 aa16.08■□□□□ 0.16
NXPE3-205ENST00000491511 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
NXPE3-205ENST00000491511 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
NXPE3-205ENST00000491511 BCL11AQ9H165 835 aa16.07■□□□□ 0.16
NXPE3-205ENST00000491511 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
NXPE3-205ENST00000491511 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
NXPE3-205ENST00000491511 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
NXPE3-205ENST00000491511 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
NXPE3-205ENST00000491511 TRIM44Q96DX7 344 aaPredicted RBP15.98■□□□□ 0.15
NXPE3-205ENST00000491511 BECN1Q14457 450 aa15.97■□□□□ 0.15
NXPE3-205ENST00000491511 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
NXPE3-205ENST00000491511 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
NXPE3-205ENST00000491511 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
NXPE3-205ENST00000491511 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
NXPE3-205ENST00000491511 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
NXPE3-205ENST00000491511 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
NXPE3-205ENST00000491511 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
NXPE3-205ENST00000491511 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
NXPE3-205ENST00000491511 ARXQ96QS3 562 aa15.85■□□□□ 0.13
NXPE3-205ENST00000491511 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
NXPE3-205ENST00000491511 CDK11BP21127 795 aaKnown RBP15.84■□□□□ 0.13
NXPE3-205ENST00000491511 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
NXPE3-205ENST00000491511 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.13
NXPE3-205ENST00000491511 MRS2Q9HD23 443 aa15.81■□□□□ 0.12
NXPE3-205ENST00000491511 MIER1Q8N108 512 aa15.73■□□□□ 0.11
NXPE3-205ENST00000491511 PTMAP06454 111 aaKnown RBP15.73■□□□□ 0.11
NXPE3-205ENST00000491511 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
NXPE3-205ENST00000491511 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
NXPE3-205ENST00000491511 NAP1L5Q96NT1 182 aaPredicted RBP15.69■□□□□ 0.1
NXPE3-205ENST00000491511 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
NXPE3-205ENST00000491511 ZRSR1Q15695 479 aaKnown RBP15.67■□□□□ 0.1
NXPE3-205ENST00000491511 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
NXPE3-205ENST00000491511 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
NXPE3-205ENST00000491511 EIF4G2P78344 907 aaKnown RBP eCLIP15.65■□□□□ 0.1
NXPE3-205ENST00000491511 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
NXPE3-205ENST00000491511 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
NXPE3-205ENST00000491511 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
NXPE3-205ENST00000491511 FBLN2P98095 1184 aa15.63■□□□□ 0.09
NXPE3-205ENST00000491511 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms