RNA–Protein interactions for RNA: ENST00000359831.8

TRAF3IP2-202, Transcript of TRAF3 interacting protein 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAF3IP2, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-202ENST00000359831 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
TRAF3IP2-202ENST00000359831 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
TRAF3IP2-202ENST00000359831 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
TRAF3IP2-202ENST00000359831 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
TRAF3IP2-202ENST00000359831 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
TRAF3IP2-202ENST00000359831 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
TRAF3IP2-202ENST00000359831 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
TRAF3IP2-202ENST00000359831 ABCC9O60706 1549 aa21.39■■□□□ 1.02
TRAF3IP2-202ENST00000359831 NACADO15069 1562 aa21.36■■□□□ 1.01
TRAF3IP2-202ENST00000359831 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
TRAF3IP2-202ENST00000359831 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
TRAF3IP2-202ENST00000359831 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
TRAF3IP2-202ENST00000359831 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
TRAF3IP2-202ENST00000359831 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
TRAF3IP2-202ENST00000359831 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
TRAF3IP2-202ENST00000359831 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
TRAF3IP2-202ENST00000359831 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
TRAF3IP2-202ENST00000359831 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.86
TRAF3IP2-202ENST00000359831 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
TRAF3IP2-202ENST00000359831 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
TRAF3IP2-202ENST00000359831 WIZO95785 1651 aa20.2■□□□□ 0.82
TRAF3IP2-202ENST00000359831 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
TRAF3IP2-202ENST00000359831 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP2-202ENST00000359831 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
TRAF3IP2-202ENST00000359831 HRCP23327 699 aa20.02■□□□□ 0.8
TRAF3IP2-202ENST00000359831 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
TRAF3IP2-202ENST00000359831 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
TRAF3IP2-202ENST00000359831 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
TRAF3IP2-202ENST00000359831 LOC105371045A0A1W2PR82 267 aa19.82■□□□□ 0.76
TRAF3IP2-202ENST00000359831 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
TRAF3IP2-202ENST00000359831 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
TRAF3IP2-202ENST00000359831 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
TRAF3IP2-202ENST00000359831 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
TRAF3IP2-202ENST00000359831 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
TRAF3IP2-202ENST00000359831 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
TRAF3IP2-202ENST00000359831 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
TRAF3IP2-202ENST00000359831 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
TRAF3IP2-202ENST00000359831 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
TRAF3IP2-202ENST00000359831 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
TRAF3IP2-202ENST00000359831 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
TRAF3IP2-202ENST00000359831 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
TRAF3IP2-202ENST00000359831 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
TRAF3IP2-202ENST00000359831 CFTRP13569 1480 aa19.3■□□□□ 0.68
TRAF3IP2-202ENST00000359831 EEA1Q15075 1411 aa19.27■□□□□ 0.68
TRAF3IP2-202ENST00000359831 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
TRAF3IP2-202ENST00000359831 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
TRAF3IP2-202ENST00000359831 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
TRAF3IP2-202ENST00000359831 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
TRAF3IP2-202ENST00000359831 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
TRAF3IP2-202ENST00000359831 SOGA1O94964 1423 aa19.11■□□□□ 0.65
TRAF3IP2-202ENST00000359831 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
TRAF3IP2-202ENST00000359831 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
TRAF3IP2-202ENST00000359831 CUX1P39880 1505 aa19.03■□□□□ 0.64
TRAF3IP2-202ENST00000359831 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
TRAF3IP2-202ENST00000359831 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
TRAF3IP2-202ENST00000359831 KIF21BO75037 1637 aa18.96■□□□□ 0.63
TRAF3IP2-202ENST00000359831 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
TRAF3IP2-202ENST00000359831 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
TRAF3IP2-202ENST00000359831 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
TRAF3IP2-202ENST00000359831 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
TRAF3IP2-202ENST00000359831 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
TRAF3IP2-202ENST00000359831 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
TRAF3IP2-202ENST00000359831 NESP48681 1621 aa18.84■□□□□ 0.61
TRAF3IP2-202ENST00000359831 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
TRAF3IP2-202ENST00000359831 CEP162Q5TB80 1403 aa18.83■□□□□ 0.6
TRAF3IP2-202ENST00000359831 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
TRAF3IP2-202ENST00000359831 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP2-202ENST00000359831 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
TRAF3IP2-202ENST00000359831 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
TRAF3IP2-202ENST00000359831 TOPBP1Q92547 1522 aa18.77■□□□□ 0.59
TRAF3IP2-202ENST00000359831 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
TRAF3IP2-202ENST00000359831 CUX2O14529 1486 aa18.71■□□□□ 0.59
TRAF3IP2-202ENST00000359831 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
TRAF3IP2-202ENST00000359831 CCER1Q8TC90 406 aaPredicted RBP18.7■□□□□ 0.58
TRAF3IP2-202ENST00000359831 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
TRAF3IP2-202ENST00000359831 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
TRAF3IP2-202ENST00000359831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
TRAF3IP2-202ENST00000359831 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP2-202ENST00000359831 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
TRAF3IP2-202ENST00000359831 IGF1RP08069 1367 aa18.64■□□□□ 0.57
TRAF3IP2-202ENST00000359831 CLIP1P30622 1438 aa18.62■□□□□ 0.57
TRAF3IP2-202ENST00000359831 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
TRAF3IP2-202ENST00000359831 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
TRAF3IP2-202ENST00000359831 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
TRAF3IP2-202ENST00000359831 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
TRAF3IP2-202ENST00000359831 CUL7Q14999 1698 aa18.54■□□□□ 0.56
TRAF3IP2-202ENST00000359831 VPS8Q8N3P4 1428 aa18.51■□□□□ 0.55
TRAF3IP2-202ENST00000359831 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
TRAF3IP2-202ENST00000359831 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
TRAF3IP2-202ENST00000359831 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
TRAF3IP2-202ENST00000359831 WDR62O43379 1518 aa18.46■□□□□ 0.55
TRAF3IP2-202ENST00000359831 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
TRAF3IP2-202ENST00000359831 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
TRAF3IP2-202ENST00000359831 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
TRAF3IP2-202ENST00000359831 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
TRAF3IP2-202ENST00000359831 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
TRAF3IP2-202ENST00000359831 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
TRAF3IP2-202ENST00000359831 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
TRAF3IP2-202ENST00000359831 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
TRAF3IP2-202ENST00000359831 APLP2Q06481 763 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms