RNA–Protein interactions for RNA: ENST00000443719.1

LINC01046-201, Transcript of long intergenic non-protein coding RNA 1046, humanhuman

TSL 3 BASIC

Gene LINC01046, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01046-201ENST00000443719 NISCHQ9Y2I1 1504 aa30.18■■■□□ 2.42
LINC01046-201ENST00000443719 CCDC180Q9P1Z9 1646 aa26.69■■□□□ 1.86
LINC01046-201ENST00000443719 ABCC9O60706 1549 aa25.92■■□□□ 1.74
LINC01046-201ENST00000443719 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
LINC01046-201ENST00000443719 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
LINC01046-201ENST00000443719 NACADO15069 1562 aa25.03■■□□□ 1.6
LINC01046-201ENST00000443719 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
LINC01046-201ENST00000443719 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
LINC01046-201ENST00000443719 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
LINC01046-201ENST00000443719 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
LINC01046-201ENST00000443719 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
LINC01046-201ENST00000443719 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
LINC01046-201ENST00000443719 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
LINC01046-201ENST00000443719 BICRAQ9NZM4 1560 aa24.15■■□□□ 1.46
LINC01046-201ENST00000443719 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
LINC01046-201ENST00000443719 CECR2Q9BXF3 1484 aa23.48■■□□□ 1.35
LINC01046-201ENST00000443719 BAZ1AQ9NRL2 1556 aaPredicted RBP23.41■■□□□ 1.34
LINC01046-201ENST00000443719 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
LINC01046-201ENST00000443719 SMARCA4P51532 1647 aa23.38■■□□□ 1.33
LINC01046-201ENST00000443719 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
LINC01046-201ENST00000443719 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
LINC01046-201ENST00000443719 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
LINC01046-201ENST00000443719 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
LINC01046-201ENST00000443719 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
LINC01046-201ENST00000443719 WIZO95785 1651 aa23.07■■□□□ 1.28
LINC01046-201ENST00000443719 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
LINC01046-201ENST00000443719 PEG3Q9GZU2 1588 aa23.05■■□□□ 1.28
LINC01046-201ENST00000443719 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
LINC01046-201ENST00000443719 HMGXB3Q12766 1538 aa23■■□□□ 1.27
LINC01046-201ENST00000443719 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
LINC01046-201ENST00000443719 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
LINC01046-201ENST00000443719 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
LINC01046-201ENST00000443719 NESP48681 1621 aa22.47■■□□□ 1.19
LINC01046-201ENST00000443719 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.18
LINC01046-201ENST00000443719 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
LINC01046-201ENST00000443719 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
LINC01046-201ENST00000443719 CFTRP13569 1480 aa22.35■■□□□ 1.17
LINC01046-201ENST00000443719 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
LINC01046-201ENST00000443719 PRDM2Q13029 1718 aa22.25■■□□□ 1.15
LINC01046-201ENST00000443719 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
LINC01046-201ENST00000443719 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
LINC01046-201ENST00000443719 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
LINC01046-201ENST00000443719 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
LINC01046-201ENST00000443719 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
LINC01046-201ENST00000443719 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
LINC01046-201ENST00000443719 WDR62O43379 1518 aa21.94■■□□□ 1.1
LINC01046-201ENST00000443719 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
LINC01046-201ENST00000443719 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
LINC01046-201ENST00000443719 CUX2O14529 1486 aa21.9■■□□□ 1.1
LINC01046-201ENST00000443719 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
LINC01046-201ENST00000443719 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
LINC01046-201ENST00000443719 CUX1P39880 1505 aa21.83■■□□□ 1.09
LINC01046-201ENST00000443719 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
LINC01046-201ENST00000443719 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
LINC01046-201ENST00000443719 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
LINC01046-201ENST00000443719 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
LINC01046-201ENST00000443719 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
LINC01046-201ENST00000443719 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
LINC01046-201ENST00000443719 SOGA1O94964 1423 aa21.67■■□□□ 1.06
LINC01046-201ENST00000443719 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
LINC01046-201ENST00000443719 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
LINC01046-201ENST00000443719 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
LINC01046-201ENST00000443719 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
LINC01046-201ENST00000443719 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
LINC01046-201ENST00000443719 ABCA10Q8WWZ4 1543 aa21.5■■□□□ 1.03
LINC01046-201ENST00000443719 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
LINC01046-201ENST00000443719 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
LINC01046-201ENST00000443719 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.03
LINC01046-201ENST00000443719 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
LINC01046-201ENST00000443719 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
LINC01046-201ENST00000443719 KIF27Q86VH2 1401 aa21.39■■□□□ 1.02
LINC01046-201ENST00000443719 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.01
LINC01046-201ENST00000443719 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
LINC01046-201ENST00000443719 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
LINC01046-201ENST00000443719 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
LINC01046-201ENST00000443719 FBLN2P98095 1184 aa21.32■■□□□ 1
LINC01046-201ENST00000443719 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
LINC01046-201ENST00000443719 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
LINC01046-201ENST00000443719 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
LINC01046-201ENST00000443719 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
LINC01046-201ENST00000443719 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
LINC01046-201ENST00000443719 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
LINC01046-201ENST00000443719 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
LINC01046-201ENST00000443719 IGF1RP08069 1367 aa21.18■□□□□ 0.98
LINC01046-201ENST00000443719 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
LINC01046-201ENST00000443719 EEA1Q15075 1411 aa21.18■□□□□ 0.98
LINC01046-201ENST00000443719 CHD1O14646 1710 aa21.18■□□□□ 0.98
LINC01046-201ENST00000443719 CUL7Q14999 1698 aa21.17■□□□□ 0.98
LINC01046-201ENST00000443719 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
LINC01046-201ENST00000443719 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
LINC01046-201ENST00000443719 OSCARQ8IYS5 282 aa21.1■□□□□ 0.97
LINC01046-201ENST00000443719 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
LINC01046-201ENST00000443719 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
LINC01046-201ENST00000443719 EHMT2Q96KQ7 1210 aa21.03■□□□□ 0.96
LINC01046-201ENST00000443719 PRXQ9BXM0 1461 aa20.97■□□□□ 0.95
LINC01046-201ENST00000443719 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
LINC01046-201ENST00000443719 NUP160Q12769 1436 aa20.94■□□□□ 0.94
LINC01046-201ENST00000443719 KIF21BO75037 1637 aa20.91■□□□□ 0.94
LINC01046-201ENST00000443719 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
LINC01046-201ENST00000443719 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms