RNA–Protein interactions for RNA: ENST00000329357.6

FAM47B-201, Transcript of family with sequence similarity 47 member B, humanhuman

APPRIS P1 BASIC

Gene FAM47B, Length 2,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47B-201ENST00000329357 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
FAM47B-201ENST00000329357 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
FAM47B-201ENST00000329357 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
FAM47B-201ENST00000329357 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
FAM47B-201ENST00000329357 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
FAM47B-201ENST00000329357 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
FAM47B-201ENST00000329357 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
FAM47B-201ENST00000329357 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
FAM47B-201ENST00000329357 NACADO15069 1562 aa21.23■□□□□ 0.99
FAM47B-201ENST00000329357 ABCC9O60706 1549 aa21.1■□□□□ 0.97
FAM47B-201ENST00000329357 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
FAM47B-201ENST00000329357 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
FAM47B-201ENST00000329357 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
FAM47B-201ENST00000329357 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
FAM47B-201ENST00000329357 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
FAM47B-201ENST00000329357 CECR2Q9BXF3 1484 aa20.49■□□□□ 0.87
FAM47B-201ENST00000329357 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
FAM47B-201ENST00000329357 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
FAM47B-201ENST00000329357 WIZO95785 1651 aa20.33■□□□□ 0.84
FAM47B-201ENST00000329357 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
FAM47B-201ENST00000329357 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
FAM47B-201ENST00000329357 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
FAM47B-201ENST00000329357 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
FAM47B-201ENST00000329357 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
FAM47B-201ENST00000329357 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.79
FAM47B-201ENST00000329357 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
FAM47B-201ENST00000329357 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
FAM47B-201ENST00000329357 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
FAM47B-201ENST00000329357 LOC105371045A0A1W2PR82 267 aa19.87■□□□□ 0.77
FAM47B-201ENST00000329357 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
FAM47B-201ENST00000329357 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
FAM47B-201ENST00000329357 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
FAM47B-201ENST00000329357 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
FAM47B-201ENST00000329357 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
FAM47B-201ENST00000329357 NCAPD3P42695 1498 aa19.57■□□□□ 0.72
FAM47B-201ENST00000329357 EEA1Q15075 1411 aa19.56■□□□□ 0.72
FAM47B-201ENST00000329357 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
FAM47B-201ENST00000329357 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
FAM47B-201ENST00000329357 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
FAM47B-201ENST00000329357 HRCP23327 699 aa19.4■□□□□ 0.7
FAM47B-201ENST00000329357 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
FAM47B-201ENST00000329357 SOGA1O94964 1423 aa19.37■□□□□ 0.69
FAM47B-201ENST00000329357 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
FAM47B-201ENST00000329357 TOP2BQ02880 1626 aa19.33■□□□□ 0.68
FAM47B-201ENST00000329357 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
FAM47B-201ENST00000329357 TNIKQ9UKE5 1360 aa19.29■□□□□ 0.68
FAM47B-201ENST00000329357 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
FAM47B-201ENST00000329357 CFTRP13569 1480 aa19.27■□□□□ 0.67
FAM47B-201ENST00000329357 KIF21BO75037 1637 aa19.25■□□□□ 0.67
FAM47B-201ENST00000329357 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
FAM47B-201ENST00000329357 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
FAM47B-201ENST00000329357 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
FAM47B-201ENST00000329357 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
FAM47B-201ENST00000329357 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
FAM47B-201ENST00000329357 CC2D2AQ9P2K1 1620 aa19.17■□□□□ 0.66
FAM47B-201ENST00000329357 CUX1P39880 1505 aa19.1■□□□□ 0.65
FAM47B-201ENST00000329357 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
FAM47B-201ENST00000329357 CADPSQ9ULU8 1353 aa19.08■□□□□ 0.64
FAM47B-201ENST00000329357 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
FAM47B-201ENST00000329357 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
FAM47B-201ENST00000329357 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
FAM47B-201ENST00000329357 PRXQ9BXM0 1461 aa18.98■□□□□ 0.63
FAM47B-201ENST00000329357 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
FAM47B-201ENST00000329357 CLIP1P30622 1438 aa18.95■□□□□ 0.62
FAM47B-201ENST00000329357 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
FAM47B-201ENST00000329357 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
FAM47B-201ENST00000329357 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
FAM47B-201ENST00000329357 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
FAM47B-201ENST00000329357 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
FAM47B-201ENST00000329357 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
FAM47B-201ENST00000329357 CUX2O14529 1486 aa18.78■□□□□ 0.6
FAM47B-201ENST00000329357 IGF1RP08069 1367 aa18.74■□□□□ 0.59
FAM47B-201ENST00000329357 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
FAM47B-201ENST00000329357 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
FAM47B-201ENST00000329357 APLP2Q06481 763 aa18.7■□□□□ 0.58
FAM47B-201ENST00000329357 NESP48681 1621 aa18.69■□□□□ 0.58
FAM47B-201ENST00000329357 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
FAM47B-201ENST00000329357 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
FAM47B-201ENST00000329357 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
FAM47B-201ENST00000329357 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
FAM47B-201ENST00000329357 CUL7Q14999 1698 aa18.62■□□□□ 0.57
FAM47B-201ENST00000329357 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
FAM47B-201ENST00000329357 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
FAM47B-201ENST00000329357 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
FAM47B-201ENST00000329357 CCER1Q8TC90 406 aaPredicted RBP18.56■□□□□ 0.56
FAM47B-201ENST00000329357 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
FAM47B-201ENST00000329357 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
FAM47B-201ENST00000329357 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
FAM47B-201ENST00000329357 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
FAM47B-201ENST00000329357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
FAM47B-201ENST00000329357 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
FAM47B-201ENST00000329357 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
FAM47B-201ENST00000329357 CTTNBP2Q8WZ74 1663 aa18.49■□□□□ 0.55
FAM47B-201ENST00000329357 EFCAB5A4FU69 1503 aa18.47■□□□□ 0.55
FAM47B-201ENST00000329357 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
FAM47B-201ENST00000329357 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
FAM47B-201ENST00000329357 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
FAM47B-201ENST00000329357 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
FAM47B-201ENST00000329357 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
FAM47B-201ENST00000329357 TIAM1Q13009 1591 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms