RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
TRERF1-202ENST00000354325 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
TRERF1-202ENST00000354325 HRCP23327 699 aa20.39■□□□□ 0.85
TRERF1-202ENST00000354325 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
TRERF1-202ENST00000354325 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
TRERF1-202ENST00000354325 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
TRERF1-202ENST00000354325 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
TRERF1-202ENST00000354325 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.75
TRERF1-202ENST00000354325 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
TRERF1-202ENST00000354325 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
TRERF1-202ENST00000354325 MYT1Q01538 1121 aa19.64■□□□□ 0.73
TRERF1-202ENST00000354325 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
TRERF1-202ENST00000354325 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
TRERF1-202ENST00000354325 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
TRERF1-202ENST00000354325 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
TRERF1-202ENST00000354325 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
TRERF1-202ENST00000354325 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
TRERF1-202ENST00000354325 CENPBP07199 599 aaPredicted RBP19.06■□□□□ 0.64
TRERF1-202ENST00000354325 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
TRERF1-202ENST00000354325 ACIN1Q9UKV3 1341 aaKnown RBP18.87■□□□□ 0.61
TRERF1-202ENST00000354325 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
TRERF1-202ENST00000354325 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
TRERF1-202ENST00000354325 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
TRERF1-202ENST00000354325 GTF3C3Q9Y5Q9 886 aa18.62■□□□□ 0.57
TRERF1-202ENST00000354325 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
TRERF1-202ENST00000354325 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
TRERF1-202ENST00000354325 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
TRERF1-202ENST00000354325 ABCC9O60706 1549 aa18.49■□□□□ 0.55
TRERF1-202ENST00000354325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
TRERF1-202ENST00000354325 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
TRERF1-202ENST00000354325 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
TRERF1-202ENST00000354325 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
TRERF1-202ENST00000354325 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
TRERF1-202ENST00000354325 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
TRERF1-202ENST00000354325 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
TRERF1-202ENST00000354325 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
TRERF1-202ENST00000354325 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
TRERF1-202ENST00000354325 APLP2Q06481 763 aa17.98■□□□□ 0.47
TRERF1-202ENST00000354325 EEA1Q15075 1411 aa17.97■□□□□ 0.47
TRERF1-202ENST00000354325 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
TRERF1-202ENST00000354325 CEP162Q5TB80 1403 aa17.93■□□□□ 0.46
TRERF1-202ENST00000354325 MIER1Q8N108 512 aa17.93■□□□□ 0.46
TRERF1-202ENST00000354325 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
TRERF1-202ENST00000354325 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRERF1-202ENST00000354325 ANP32EQ9BTT0 268 aa17.83■□□□□ 0.44
TRERF1-202ENST00000354325 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
TRERF1-202ENST00000354325 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
TRERF1-202ENST00000354325 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
TRERF1-202ENST00000354325 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
TRERF1-202ENST00000354325 NACADO15069 1562 aa17.74■□□□□ 0.43
TRERF1-202ENST00000354325 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
TRERF1-202ENST00000354325 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
TRERF1-202ENST00000354325 BAZ1AQ9NRL2 1556 aaPredicted RBP17.73■□□□□ 0.43
TRERF1-202ENST00000354325 NEFLP07196 543 aa17.71■□□□□ 0.43
TRERF1-202ENST00000354325 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
TRERF1-202ENST00000354325 WIZO95785 1651 aa17.62■□□□□ 0.41
TRERF1-202ENST00000354325 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
TRERF1-202ENST00000354325 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
TRERF1-202ENST00000354325 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
TRERF1-202ENST00000354325 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
TRERF1-202ENST00000354325 CLIP1P30622 1438 aa17.56■□□□□ 0.4
TRERF1-202ENST00000354325 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
TRERF1-202ENST00000354325 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
TRERF1-202ENST00000354325 SOGA1O94964 1423 aa17.53■□□□□ 0.4
TRERF1-202ENST00000354325 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
TRERF1-202ENST00000354325 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
TRERF1-202ENST00000354325 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
TRERF1-202ENST00000354325 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
TRERF1-202ENST00000354325 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
TRERF1-202ENST00000354325 KIF21BO75037 1637 aa17.4■□□□□ 0.38
TRERF1-202ENST00000354325 FKBP8Q14318 412 aa17.39■□□□□ 0.37
TRERF1-202ENST00000354325 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
TRERF1-202ENST00000354325 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
TRERF1-202ENST00000354325 BCANQ96GW7 911 aa17.33■□□□□ 0.36
TRERF1-202ENST00000354325 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
TRERF1-202ENST00000354325 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
TRERF1-202ENST00000354325 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
TRERF1-202ENST00000354325 ANP32CO43423 234 aa17.28■□□□□ 0.36
TRERF1-202ENST00000354325 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
TRERF1-202ENST00000354325 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
TRERF1-202ENST00000354325 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
TRERF1-202ENST00000354325 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
TRERF1-202ENST00000354325 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
TRERF1-202ENST00000354325 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
TRERF1-202ENST00000354325 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
TRERF1-202ENST00000354325 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
TRERF1-202ENST00000354325 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
TRERF1-202ENST00000354325 CUX2O14529 1486 aa17.12■□□□□ 0.33
TRERF1-202ENST00000354325 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
TRERF1-202ENST00000354325 ITGAEP38570 1179 aa17.08■□□□□ 0.32
TRERF1-202ENST00000354325 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
TRERF1-202ENST00000354325 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.32
TRERF1-202ENST00000354325 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
TRERF1-202ENST00000354325 TRIM52Q96A61 297 aa17.01■□□□□ 0.31
TRERF1-202ENST00000354325 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
TRERF1-202ENST00000354325 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
TRERF1-202ENST00000354325 RTL5Q5HYW3 569 aaPredicted RBP16.97■□□□□ 0.31
TRERF1-202ENST00000354325 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
TRERF1-202ENST00000354325 PPP4R2Q9NY27 417 aa16.96■□□□□ 0.31
TRERF1-202ENST00000354325 PPP1R15AO75807 674 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms