RNA–Protein interactions for RNA: ENST00000429705.6

SNRK-202, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,128 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-202ENST00000429705 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
SNRK-202ENST00000429705 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
SNRK-202ENST00000429705 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
SNRK-202ENST00000429705 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
SNRK-202ENST00000429705 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
SNRK-202ENST00000429705 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
SNRK-202ENST00000429705 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
SNRK-202ENST00000429705 APLP2Q06481 763 aa19.16■□□□□ 0.66
SNRK-202ENST00000429705 ABCC9O60706 1549 aa19■□□□□ 0.63
SNRK-202ENST00000429705 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
SNRK-202ENST00000429705 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
SNRK-202ENST00000429705 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
SNRK-202ENST00000429705 UBTFP17480 764 aaKnown RBP18.81■□□□□ 0.6
SNRK-202ENST00000429705 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
SNRK-202ENST00000429705 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNRK-202ENST00000429705 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
SNRK-202ENST00000429705 ATP1B4Q9UN42 357 aaPredicted RBP18.61■□□□□ 0.57
SNRK-202ENST00000429705 ZCCHC6Q5VYS8 1495 aaKnown RBP18.59■□□□□ 0.57
SNRK-202ENST00000429705 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
SNRK-202ENST00000429705 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
SNRK-202ENST00000429705 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
SNRK-202ENST00000429705 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
SNRK-202ENST00000429705 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
SNRK-202ENST00000429705 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
SNRK-202ENST00000429705 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
SNRK-202ENST00000429705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
SNRK-202ENST00000429705 ITGAEP38570 1179 aa18.05■□□□□ 0.48
SNRK-202ENST00000429705 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
SNRK-202ENST00000429705 HRCP23327 699 aa18.05■□□□□ 0.48
SNRK-202ENST00000429705 CENPBP07199 599 aaPredicted RBP18.02■□□□□ 0.48
SNRK-202ENST00000429705 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
SNRK-202ENST00000429705 NACADO15069 1562 aa17.93■□□□□ 0.46
SNRK-202ENST00000429705 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
SNRK-202ENST00000429705 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
SNRK-202ENST00000429705 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
SNRK-202ENST00000429705 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
SNRK-202ENST00000429705 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.43
SNRK-202ENST00000429705 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
SNRK-202ENST00000429705 FBLN2P98095 1184 aa17.66■□□□□ 0.42
SNRK-202ENST00000429705 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
SNRK-202ENST00000429705 NEFLP07196 543 aa17.57■□□□□ 0.4
SNRK-202ENST00000429705 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
SNRK-202ENST00000429705 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
SNRK-202ENST00000429705 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
SNRK-202ENST00000429705 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
SNRK-202ENST00000429705 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
SNRK-202ENST00000429705 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
SNRK-202ENST00000429705 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
SNRK-202ENST00000429705 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
SNRK-202ENST00000429705 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
SNRK-202ENST00000429705 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SNRK-202ENST00000429705 EEA1Q15075 1411 aa17.35■□□□□ 0.37
SNRK-202ENST00000429705 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
SNRK-202ENST00000429705 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
SNRK-202ENST00000429705 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
SNRK-202ENST00000429705 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
SNRK-202ENST00000429705 CLIP1P30622 1438 aa17.28■□□□□ 0.36
SNRK-202ENST00000429705 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
SNRK-202ENST00000429705 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
SNRK-202ENST00000429705 ZNF316A6NFI3 1004 aaPredicted RBP17.22■□□□□ 0.35
SNRK-202ENST00000429705 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
SNRK-202ENST00000429705 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
SNRK-202ENST00000429705 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
SNRK-202ENST00000429705 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
SNRK-202ENST00000429705 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
SNRK-202ENST00000429705 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
SNRK-202ENST00000429705 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
SNRK-202ENST00000429705 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
SNRK-202ENST00000429705 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
SNRK-202ENST00000429705 ANP32CO43423 234 aa17.1■□□□□ 0.33
SNRK-202ENST00000429705 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
SNRK-202ENST00000429705 WIZO95785 1651 aa17.09■□□□□ 0.33
SNRK-202ENST00000429705 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
SNRK-202ENST00000429705 SOGA1O94964 1423 aa17.04■□□□□ 0.32
SNRK-202ENST00000429705 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
SNRK-202ENST00000429705 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
SNRK-202ENST00000429705 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
SNRK-202ENST00000429705 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNRK-202ENST00000429705 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
SNRK-202ENST00000429705 CUX2O14529 1486 aa16.96■□□□□ 0.31
SNRK-202ENST00000429705 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
SNRK-202ENST00000429705 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
SNRK-202ENST00000429705 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
SNRK-202ENST00000429705 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
SNRK-202ENST00000429705 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
SNRK-202ENST00000429705 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
SNRK-202ENST00000429705 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
SNRK-202ENST00000429705 MYT1Q01538 1121 aa16.85■□□□□ 0.29
SNRK-202ENST00000429705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■□□□ 14
SNRK-202ENST00000429705 RRP7BPQ9NSQ0 103 aa16.84■□□□□ 0.29
SNRK-202ENST00000429705 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.29
SNRK-202ENST00000429705 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
SNRK-202ENST00000429705 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
SNRK-202ENST00000429705 BCANQ96GW7 911 aa16.8■□□□□ 0.28
SNRK-202ENST00000429705 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
SNRK-202ENST00000429705 CHGAP10645 457 aaKnown RBP16.79■□□□□ 0.28
SNRK-202ENST00000429705 KCNH8Q96L42 1107 aa16.78■□□□□ 0.28
SNRK-202ENST00000429705 DDX10Q13206 875 aaKnown RBP16.78■□□□□ 0.28
SNRK-202ENST00000429705 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
SNRK-202ENST00000429705 EIF4G1Q04637 1599 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms