RNA–Protein interactions for RNA: ENST00000457647.2

RGPD4-AS1-202, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 1 (best) BASIC

Gene RGPD4-AS1, Length 1,792 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-202ENST00000457647 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
RGPD4-AS1-202ENST00000457647 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
RGPD4-AS1-202ENST00000457647 ABCC9O60706 1549 aa25.5■■□□□ 1.67
RGPD4-AS1-202ENST00000457647 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
RGPD4-AS1-202ENST00000457647 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.57
RGPD4-AS1-202ENST00000457647 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
RGPD4-AS1-202ENST00000457647 NACADO15069 1562 aa24.71■■□□□ 1.55
RGPD4-AS1-202ENST00000457647 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
RGPD4-AS1-202ENST00000457647 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.53
RGPD4-AS1-202ENST00000457647 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
RGPD4-AS1-202ENST00000457647 UNC13AQ9UPW8 1703 aa24.23■■□□□ 1.47
RGPD4-AS1-202ENST00000457647 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
RGPD4-AS1-202ENST00000457647 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
RGPD4-AS1-202ENST00000457647 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
RGPD4-AS1-202ENST00000457647 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
RGPD4-AS1-202ENST00000457647 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
RGPD4-AS1-202ENST00000457647 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
RGPD4-AS1-202ENST00000457647 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
RGPD4-AS1-202ENST00000457647 MROH2BQ7Z745 1585 aa23.15■■□□□ 1.3
RGPD4-AS1-202ENST00000457647 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
RGPD4-AS1-202ENST00000457647 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
RGPD4-AS1-202ENST00000457647 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.27
RGPD4-AS1-202ENST00000457647 WIZO95785 1651 aa22.94■■□□□ 1.26
RGPD4-AS1-202ENST00000457647 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
RGPD4-AS1-202ENST00000457647 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
RGPD4-AS1-202ENST00000457647 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
RGPD4-AS1-202ENST00000457647 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
RGPD4-AS1-202ENST00000457647 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
RGPD4-AS1-202ENST00000457647 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
RGPD4-AS1-202ENST00000457647 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
RGPD4-AS1-202ENST00000457647 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
RGPD4-AS1-202ENST00000457647 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
RGPD4-AS1-202ENST00000457647 NESP48681 1621 aa22.23■■□□□ 1.15
RGPD4-AS1-202ENST00000457647 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
RGPD4-AS1-202ENST00000457647 CFTRP13569 1480 aa22.14■■□□□ 1.14
RGPD4-AS1-202ENST00000457647 LAMC3Q9Y6N6 1575 aa22.13■■□□□ 1.13
RGPD4-AS1-202ENST00000457647 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
RGPD4-AS1-202ENST00000457647 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
RGPD4-AS1-202ENST00000457647 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
RGPD4-AS1-202ENST00000457647 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
RGPD4-AS1-202ENST00000457647 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
RGPD4-AS1-202ENST00000457647 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
RGPD4-AS1-202ENST00000457647 ABCC8Q09428 1581 aa21.79■■□□□ 1.08
RGPD4-AS1-202ENST00000457647 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
RGPD4-AS1-202ENST00000457647 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
RGPD4-AS1-202ENST00000457647 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
RGPD4-AS1-202ENST00000457647 CUX1P39880 1505 aa21.69■■□□□ 1.06
RGPD4-AS1-202ENST00000457647 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
RGPD4-AS1-202ENST00000457647 WDR62O43379 1518 aa21.66■■□□□ 1.06
RGPD4-AS1-202ENST00000457647 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
RGPD4-AS1-202ENST00000457647 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
RGPD4-AS1-202ENST00000457647 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
RGPD4-AS1-202ENST00000457647 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.05
RGPD4-AS1-202ENST00000457647 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
RGPD4-AS1-202ENST00000457647 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
RGPD4-AS1-202ENST00000457647 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
RGPD4-AS1-202ENST00000457647 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
RGPD4-AS1-202ENST00000457647 CUX2O14529 1486 aa21.48■■□□□ 1.03
RGPD4-AS1-202ENST00000457647 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
RGPD4-AS1-202ENST00000457647 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
RGPD4-AS1-202ENST00000457647 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
RGPD4-AS1-202ENST00000457647 SOGA1O94964 1423 aa21.4■■□□□ 1.02
RGPD4-AS1-202ENST00000457647 IFT140Q96RY7 1462 aa21.35■■□□□ 1.01
RGPD4-AS1-202ENST00000457647 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
RGPD4-AS1-202ENST00000457647 ZNF608Q9ULD9 1512 aaPredicted RBP21.31■■□□□ 1
RGPD4-AS1-202ENST00000457647 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
RGPD4-AS1-202ENST00000457647 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
RGPD4-AS1-202ENST00000457647 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.99
RGPD4-AS1-202ENST00000457647 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
RGPD4-AS1-202ENST00000457647 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
RGPD4-AS1-202ENST00000457647 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
RGPD4-AS1-202ENST00000457647 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
RGPD4-AS1-202ENST00000457647 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
RGPD4-AS1-202ENST00000457647 PBRM1Q86U86 1689 aa21.14■□□□□ 0.97
RGPD4-AS1-202ENST00000457647 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.97
RGPD4-AS1-202ENST00000457647 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
RGPD4-AS1-202ENST00000457647 IGF1RP08069 1367 aa21.04■□□□□ 0.96
RGPD4-AS1-202ENST00000457647 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
RGPD4-AS1-202ENST00000457647 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
RGPD4-AS1-202ENST00000457647 EEA1Q15075 1411 aa20.99■□□□□ 0.95
RGPD4-AS1-202ENST00000457647 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
RGPD4-AS1-202ENST00000457647 MAGI1Q96QZ7 1491 aaPredicted RBP20.97■□□□□ 0.95
RGPD4-AS1-202ENST00000457647 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
RGPD4-AS1-202ENST00000457647 CUL7Q14999 1698 aa20.94■□□□□ 0.94
RGPD4-AS1-202ENST00000457647 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
RGPD4-AS1-202ENST00000457647 CHD1O14646 1710 aa20.91■□□□□ 0.94
RGPD4-AS1-202ENST00000457647 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
RGPD4-AS1-202ENST00000457647 SYNJ2O15056 1496 aa20.89■□□□□ 0.94
RGPD4-AS1-202ENST00000457647 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
RGPD4-AS1-202ENST00000457647 FBLN2P98095 1184 aa20.87■□□□□ 0.93
RGPD4-AS1-202ENST00000457647 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
RGPD4-AS1-202ENST00000457647 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
RGPD4-AS1-202ENST00000457647 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
RGPD4-AS1-202ENST00000457647 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.92
RGPD4-AS1-202ENST00000457647 KIF21BO75037 1637 aa20.81■□□□□ 0.92
RGPD4-AS1-202ENST00000457647 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
RGPD4-AS1-202ENST00000457647 NUP160Q12769 1436 aa20.71■□□□□ 0.91
RGPD4-AS1-202ENST00000457647 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
RGPD4-AS1-202ENST00000457647 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.9
RGPD4-AS1-202ENST00000457647 CTTNBP2Q8WZ74 1663 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms