Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TOP3B-203ENST00000424393 824 ntTSL 59.63□□□□□ -0.874e-6■■■■□ 19.9
LSM11P83369 TOP3B-212ENST00000456075 561 ntTSL 49.05□□□□□ -0.964e-6■■■■□ 19.9
LSM11P83369 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.59□□□□□ -0.239e-8■■■■□ 19.9
LSM11P83369 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.62□□□□□ -0.232e-7■■■■□ 19.9
LSM11P83369 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.62□□□□□ -0.232e-7■■■■□ 19.9
LSM11P83369 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.68□□□□□ -0.382e-7■■■■□ 19.9
LSM11P83369 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.31□□□□□ -0.442e-7■■■■□ 19.9
LSM11P83369 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.562e-7■■■■□ 19.9
LSM11P83369 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.592e-7■■■■□ 19.9
LSM11P83369 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.642e-7■■■■□ 19.9
LSM11P83369 COL2A1-209ENST00000546974 703 ntTSL 1 (best)12.48□□□□□ -0.414e-8■■■■□ 19.8
LSM11P83369 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.444e-8■■■■□ 19.8
LSM11P83369 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.86■□□□□ 0.932e-6■■■■□ 19.8
LSM11P83369 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.892e-6■■■■□ 19.8
LSM11P83369 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.53■□□□□ 0.882e-6■■■■□ 19.8
LSM11P83369 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.86■□□□□ 0.772e-6■■■■□ 19.8
LSM11P83369 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.82■□□□□ 0.442e-6■■■■□ 19.8
LSM11P83369 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.282e-6■■■■□ 19.8
LSM11P83369 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-6■■■■□ 19.8
LSM11P83369 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.39■□□□□ 0.052e-6■■■■□ 19.8
LSM11P83369 IRF3-219ENST00000597636 2874 ntTSL 514.65□□□□□ -0.062e-6■■■■□ 19.8
LSM11P83369 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.082e-6■■■■□ 19.8
LSM11P83369 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.76□□□□□ -0.372e-6■■■■□ 19.8
LSM11P83369 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.35□□□□□ -0.432e-6■■■■□ 19.8
LSM11P83369 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC11.98□□□□□ -0.492e-6■■■■□ 19.8
LSM11P83369 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.93□□□□□ -0.52e-6■■■■□ 19.8
LSM11P83369 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.352e-6■■■■□ 19.8
LSM11P83369 SSBP4-205ENST00000598159 747 ntTSL 319.88■□□□□ 0.773e-6■■■■□ 19.8
LSM11P83369 SSBP4-209ENST00000601357 606 ntTSL 519.52■□□□□ 0.723e-6■■■■□ 19.8
LSM11P83369 BSG-205ENST00000571735 2155 ntTSL 215.03■□□□□ -02e-6■■■■□ 19.8
LSM11P83369 SSBP4-204ENST00000597724 865 ntTSL 514.65□□□□□ -0.063e-6■■■■□ 19.8
LSM11P83369 SSBP4-211ENST00000601614 628 ntTSL 214.17□□□□□ -0.143e-6■■■■□ 19.8
LSM11P83369 SSBP4-214ENST00000607020 504 ntTSL 313.25□□□□□ -0.293e-6■■■■□ 19.8
LSM11P83369 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC9.36□□□□□ -0.913e-6■■■■□ 19.8
LSM11P83369 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.683e-8■■■■□ 19.8
LSM11P83369 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.62■□□□□ 0.253e-8■■■■□ 19.8
LSM11P83369 PCED1A-206ENST00000487501 712 ntTSL 310.29□□□□□ -0.763e-8■■■■□ 19.8
LSM11P83369 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.144e-33■■■■□ 19.8
LSM11P83369 RNF123-213ENST00000498376 746 ntTSL 38.2□□□□□ -1.18e-7■■■■□ 19.8
LSM11P83369 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.347e-6■■■■□ 19.8
LSM11P83369 CCDC43-205ENST00000592333 692 ntTSL 216.43■□□□□ 0.227e-6■■■■□ 19.8
LSM11P83369 CCDC43-204ENST00000588687 721 ntTSL 216.09■□□□□ 0.177e-6■■■■□ 19.8
LSM11P83369 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.63■□□□□ 0.097e-6■■■■□ 19.8
LSM11P83369 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.247e-6■■■■□ 19.8
LSM11P83369 CUX1-218ENST00000560541 3176 ntTSL 510.73□□□□□ -0.697e-6■■■■□ 19.8
LSM11P83369 CUX1-217ENST00000558836 2965 ntTSL 510.06□□□□□ -0.87e-6■■■■□ 19.8
LSM11P83369 CUX1-216ENST00000558469 588 ntTSL 49.44□□□□□ -0.97e-6■■■■□ 19.8
LSM11P83369 PARP16-203ENST00000558873 838 ntTSL 56.52□□□□□ -1.371e-6■■■■□ 19.8
LSM11P83369 CPSF1-210ENST00000532935 506 ntTSL 513.4□□□□□ -0.261e-6■■■■□ 19.8
LSM11P83369 PFKL-205ENST00000466134 5986 ntTSL 217.92■□□□□ 0.462e-10■■■■□ 19.8
LSM11P83369 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.272e-10■■■■□ 19.8
LSM11P83369 PFKL-207ENST00000474114 6007 ntTSL 1 (best)16.35■□□□□ 0.212e-10■■■■□ 19.8
LSM11P83369 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.08■□□□□ 0.162e-10■■■■□ 19.8
LSM11P83369 PFKL-202ENST00000397961 3390 ntTSL 1 (best)14.23□□□□□ -0.132e-10■■■■□ 19.8
LSM11P83369 SMYD3-210ENST00000470863 983 ntTSL 213.78□□□□□ -0.22e-10■■■■□ 19.8
LSM11P83369 SMYD3-207ENST00000462422 971 ntTSL 512.97□□□□□ -0.332e-10■■■■□ 19.8
LSM11P83369 SMYD3-206ENST00000455277 566 ntTSL 59.47□□□□□ -0.892e-10■■■■□ 19.8
LSM11P83369 TTLL3-230ENST00000493241 762 ntTSL 37.25□□□□□ -1.255e-8■■■■□ 19.7
LSM11P83369 ABCC3-205ENST00000503337 2277 ntTSL 1 (best)12.96□□□□□ -0.345e-6■■■■□ 19.7
LSM11P83369 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.625e-6■■■■□ 19.7
LSM11P83369 ABCC3-203ENST00000502426 5326 ntTSL 210.94□□□□□ -0.665e-6■■■■□ 19.7
LSM11P83369 ABCC3-207ENST00000505699 5271 ntTSL 210.77□□□□□ -0.695e-6■■■■□ 19.7
LSM11P83369 ENO2-204ENST00000535275 724 ntTSL 38.65□□□□□ -1.022e-8■■■■□ 19.7
LSM11P83369 ENO2-213ENST00000543975 416 ntTSL 56.37□□□□□ -1.392e-8■■■■□ 19.7
LSM11P83369 HDAC6-236ENST00000498808 566 ntTSL 513.83□□□□□ -0.29e-7■■■■□ 19.6
LSM11P83369 HDAC6-223ENST00000480525 412 ntTSL 34.44□□□□□ -1.79e-7■■■■□ 19.6
LSM11P83369 COL9A2-206ENST00000466267 835 ntTSL 516.68■□□□□ 0.269e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.51■■□□□ 1.833e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.933e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.353e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-211ENST00000479237 2794 ntTSL 1 (best)15.34■□□□□ 0.053e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.03□□□□□ -0.323e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-209ENST00000461811 4828 ntTSL 1 (best)12.14□□□□□ -0.473e-7■■■■□ 19.6
LSM11P83369 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC11.62□□□□□ -0.553e-7■■■■□ 19.6
LSM11P83369 ZNF680-205ENST00000476563 769 ntTSL 312.92□□□□□ -0.342e-11■■■■□ 19.6
LSM11P83369 ZNF680-204ENST00000473601 566 ntTSL 29.13□□□□□ -0.952e-11■■■■□ 19.6
LSM11P83369 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.252e-11■■■■□ 19.6
LSM11P83369 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.52□□□□□ -1.692e-11■■■■□ 19.6
LSM11P83369 GOLGA8B-210ENST00000569100 6488 ntTSL 59.4□□□□□ -0.93e-8■■■■□ 19.6
LSM11P83369 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.063e-8■■■■□ 19.6
LSM11P83369 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.23e-8■■■■□ 19.6
LSM11P83369 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.79■□□□□ 0.766e-7■■■■□ 19.6
LSM11P83369 MIR210HG-202ENST00000528245 659 ntTSL 313.93□□□□□ -0.186e-7■■■■□ 19.6
LSM11P83369 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.89□□□□□ -0.196e-7■■■■□ 19.6
LSM11P83369 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.72□□□□□ -1.338e-7■■■■□ 19.5
LSM11P83369 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.418e-7■■■■□ 19.5
LSM11P83369 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.458e-7■■■■□ 19.5
LSM11P83369 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.89■□□□□ 0.295e-7■■■■□ 19.5
LSM11P83369 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.94□□□□□ -0.025e-7■■■■□ 19.5
LSM11P83369 ARFGAP2-205ENST00000524782 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.755e-7■■■■□ 19.5
LSM11P83369 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.593e-7■■■■□ 19.5
LSM11P83369 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.163e-7■■■■□ 19.5
LSM11P83369 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.653e-7■■■■□ 19.5
LSM11P83369 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.416e-7■■■■□ 19.5
LSM11P83369 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.11■□□□□ 0.012e-11■■■■□ 19.5
LSM11P83369 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.87■□□□□ 0.611e-6■■■■□ 19.5
LSM11P83369 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.31□□□□□ -0.121e-9■■■■□ 19.5
LSM11P83369 ZNF276-204ENST00000562530 1826 ntTSL 214.2□□□□□ -0.141e-6■■■■□ 19.5
LSM11P83369 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.182e-7■■■■□ 19.4
LSM11P83369 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.292e-7■■■■□ 19.4
Retrieved 100 of 11,495 protein–RNA pairs in 63.9 ms