RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
TOP3B-203ENST00000424393 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
TOP3B-203ENST00000424393 ABCC9O60706 1549 aa23.16■■□□□ 1.3
TOP3B-203ENST00000424393 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
TOP3B-203ENST00000424393 NACADO15069 1562 aa22.22■■□□□ 1.15
TOP3B-203ENST00000424393 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
TOP3B-203ENST00000424393 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
TOP3B-203ENST00000424393 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
TOP3B-203ENST00000424393 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
TOP3B-203ENST00000424393 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
TOP3B-203ENST00000424393 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
TOP3B-203ENST00000424393 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
TOP3B-203ENST00000424393 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
TOP3B-203ENST00000424393 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
TOP3B-203ENST00000424393 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
TOP3B-203ENST00000424393 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.95
TOP3B-203ENST00000424393 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
TOP3B-203ENST00000424393 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
TOP3B-203ENST00000424393 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
TOP3B-203ENST00000424393 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
TOP3B-203ENST00000424393 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
TOP3B-203ENST00000424393 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
TOP3B-203ENST00000424393 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
TOP3B-203ENST00000424393 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
TOP3B-203ENST00000424393 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
TOP3B-203ENST00000424393 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
TOP3B-203ENST00000424393 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
TOP3B-203ENST00000424393 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
TOP3B-203ENST00000424393 WIZO95785 1651 aa20.33■□□□□ 0.85
TOP3B-203ENST00000424393 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
TOP3B-203ENST00000424393 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
TOP3B-203ENST00000424393 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
TOP3B-203ENST00000424393 CUX2O14529 1486 aa20.06■□□□□ 0.8
TOP3B-203ENST00000424393 NESP48681 1621 aa20.03■□□□□ 0.8
TOP3B-203ENST00000424393 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
TOP3B-203ENST00000424393 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
TOP3B-203ENST00000424393 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
TOP3B-203ENST00000424393 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
TOP3B-203ENST00000424393 CFTRP13569 1480 aa19.8■□□□□ 0.76
TOP3B-203ENST00000424393 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
TOP3B-203ENST00000424393 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
TOP3B-203ENST00000424393 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
TOP3B-203ENST00000424393 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
TOP3B-203ENST00000424393 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
TOP3B-203ENST00000424393 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
TOP3B-203ENST00000424393 MRC2Q9UBG0 1479 aa19.62■□□□□ 0.73
TOP3B-203ENST00000424393 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
TOP3B-203ENST00000424393 WDR62O43379 1518 aa19.57■□□□□ 0.72
TOP3B-203ENST00000424393 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
TOP3B-203ENST00000424393 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
TOP3B-203ENST00000424393 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
TOP3B-203ENST00000424393 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
TOP3B-203ENST00000424393 CUX1P39880 1505 aa19.26■□□□□ 0.67
TOP3B-203ENST00000424393 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
TOP3B-203ENST00000424393 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
TOP3B-203ENST00000424393 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
TOP3B-203ENST00000424393 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
TOP3B-203ENST00000424393 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
TOP3B-203ENST00000424393 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
TOP3B-203ENST00000424393 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
TOP3B-203ENST00000424393 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
TOP3B-203ENST00000424393 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
TOP3B-203ENST00000424393 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
TOP3B-203ENST00000424393 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
TOP3B-203ENST00000424393 SOGA1O94964 1423 aa19.11■□□□□ 0.65
TOP3B-203ENST00000424393 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
TOP3B-203ENST00000424393 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
TOP3B-203ENST00000424393 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.645e-7■■■■□ 21.3
TOP3B-203ENST00000424393 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
TOP3B-203ENST00000424393 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
TOP3B-203ENST00000424393 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
TOP3B-203ENST00000424393 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
TOP3B-203ENST00000424393 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
TOP3B-203ENST00000424393 RIMBP3CA6NJZ7 1639 aa18.9■□□□□ 0.62
TOP3B-203ENST00000424393 RIMBP3BA6NNM3 1639 aa18.9■□□□□ 0.62
TOP3B-203ENST00000424393 RIMBP3Q9UFD9 1639 aa18.9■□□□□ 0.62
TOP3B-203ENST00000424393 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
TOP3B-203ENST00000424393 CHD1O14646 1710 aa18.88■□□□□ 0.61
TOP3B-203ENST00000424393 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
TOP3B-203ENST00000424393 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
TOP3B-203ENST00000424393 TRHP20396 242 aaPredicted RBP18.79■□□□□ 0.6
TOP3B-203ENST00000424393 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
TOP3B-203ENST00000424393 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
TOP3B-203ENST00000424393 FBLN2P98095 1184 aa18.77■□□□□ 0.6
TOP3B-203ENST00000424393 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
TOP3B-203ENST00000424393 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
TOP3B-203ENST00000424393 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
TOP3B-203ENST00000424393 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
TOP3B-203ENST00000424393 KIF27Q86VH2 1401 aa18.7■□□□□ 0.58
TOP3B-203ENST00000424393 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
TOP3B-203ENST00000424393 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
TOP3B-203ENST00000424393 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
TOP3B-203ENST00000424393 IGF1RP08069 1367 aa18.63■□□□□ 0.57
TOP3B-203ENST00000424393 CUL7Q14999 1698 aa18.61■□□□□ 0.57
TOP3B-203ENST00000424393 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
TOP3B-203ENST00000424393 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
TOP3B-203ENST00000424393 NUP160Q12769 1436 aa18.58■□□□□ 0.57
TOP3B-203ENST00000424393 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
TOP3B-203ENST00000424393 ARAP1Q96P48 1450 aa18.55■□□□□ 0.56
TOP3B-203ENST00000424393 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms