RNA–Protein interactions for RNA: ENST00000470863.1

SMYD3-210, Transcript of SET and MYND domain containing 3, humanhuman

TSL 2

Gene SMYD3, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-210ENST00000470863 NISCHQ9Y2I1 1504 aa38.81■■■■□ 3.8
SMYD3-210ENST00000470863 CCDC180Q9P1Z9 1646 aa34.58■■■■□ 3.13
SMYD3-210ENST00000470863 ABCC9O60706 1549 aa34.09■■■■□ 3.05
SMYD3-210ENST00000470863 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
SMYD3-210ENST00000470863 NACADO15069 1562 aa32.6■■■□□ 2.81
SMYD3-210ENST00000470863 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
SMYD3-210ENST00000470863 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
SMYD3-210ENST00000470863 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
SMYD3-210ENST00000470863 DCAF1Q9Y4B6 1507 aa32.11■■■□□ 2.73
SMYD3-210ENST00000470863 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
SMYD3-210ENST00000470863 UNC13AQ9UPW8 1703 aa31.81■■■□□ 2.68
SMYD3-210ENST00000470863 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.65
SMYD3-210ENST00000470863 SCRIBQ14160 1630 aa31.55■■■□□ 2.64
SMYD3-210ENST00000470863 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
SMYD3-210ENST00000470863 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
SMYD3-210ENST00000470863 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
SMYD3-210ENST00000470863 CC2D2AQ9P2K1 1620 aa30.79■■■□□ 2.52
SMYD3-210ENST00000470863 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
SMYD3-210ENST00000470863 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
SMYD3-210ENST00000470863 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
SMYD3-210ENST00000470863 NCAPD3P42695 1498 aa30.08■■■□□ 2.41
SMYD3-210ENST00000470863 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
SMYD3-210ENST00000470863 SMARCA2P51531 1590 aa30.04■■■□□ 2.4
SMYD3-210ENST00000470863 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
SMYD3-210ENST00000470863 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
SMYD3-210ENST00000470863 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
SMYD3-210ENST00000470863 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
SMYD3-210ENST00000470863 WIZO95785 1651 aa29.53■■■□□ 2.32
SMYD3-210ENST00000470863 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
SMYD3-210ENST00000470863 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
SMYD3-210ENST00000470863 NESP48681 1621 aa29.4■■■□□ 2.3
SMYD3-210ENST00000470863 LAMC3Q9Y6N6 1575 aa29.33■■■□□ 2.29
SMYD3-210ENST00000470863 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
SMYD3-210ENST00000470863 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
SMYD3-210ENST00000470863 CUX2O14529 1486 aa29.19■■■□□ 2.26
SMYD3-210ENST00000470863 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
SMYD3-210ENST00000470863 KIF21AQ7Z4S6 1674 aa29.01■■■□□ 2.23
SMYD3-210ENST00000470863 THOC2Q8NI27 1593 aaKnown RBP28.99■■■□□ 2.23
SMYD3-210ENST00000470863 CFTRP13569 1480 aa28.97■■■□□ 2.23
SMYD3-210ENST00000470863 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
SMYD3-210ENST00000470863 FANCD2Q9BXW9 1451 aa28.88■■■□□ 2.21
SMYD3-210ENST00000470863 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
SMYD3-210ENST00000470863 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
SMYD3-210ENST00000470863 WDR62O43379 1518 aa28.75■■■□□ 2.19
SMYD3-210ENST00000470863 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
SMYD3-210ENST00000470863 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
SMYD3-210ENST00000470863 URB2Q14146 1524 aaKnown RBP28.57■■■□□ 2.16
SMYD3-210ENST00000470863 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
SMYD3-210ENST00000470863 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
SMYD3-210ENST00000470863 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
SMYD3-210ENST00000470863 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
SMYD3-210ENST00000470863 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
SMYD3-210ENST00000470863 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
SMYD3-210ENST00000470863 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
SMYD3-210ENST00000470863 CUX1P39880 1505 aa28.06■■■□□ 2.08
SMYD3-210ENST00000470863 TARBP1Q13395 1621 aaKnown RBP28.04■■■□□ 2.08
SMYD3-210ENST00000470863 SOGA1O94964 1423 aa28.03■■■□□ 2.08
SMYD3-210ENST00000470863 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
SMYD3-210ENST00000470863 EIF4G3O43432 1585 aaKnown RBP28■■■□□ 2.07
SMYD3-210ENST00000470863 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
SMYD3-210ENST00000470863 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
SMYD3-210ENST00000470863 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.07
SMYD3-210ENST00000470863 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
SMYD3-210ENST00000470863 WDR97A6NE52 1622 aa27.86■■■□□ 2.05
SMYD3-210ENST00000470863 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
SMYD3-210ENST00000470863 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
SMYD3-210ENST00000470863 ABCA10Q8WWZ4 1543 aa27.75■■■□□ 2.03
SMYD3-210ENST00000470863 BIVM-ERCC5R4GMW8 1640 aa27.74■■■□□ 2.03
SMYD3-210ENST00000470863 FBLN2P98095 1184 aa27.74■■■□□ 2.03
SMYD3-210ENST00000470863 GRIN2BQ13224 1484 aa27.74■■■□□ 2.03
SMYD3-210ENST00000470863 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
SMYD3-210ENST00000470863 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.03
SMYD3-210ENST00000470863 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
SMYD3-210ENST00000470863 MAGI1Q96QZ7 1491 aaPredicted RBP27.68■■■□□ 2.02
SMYD3-210ENST00000470863 CHD1O14646 1710 aa27.65■■■□□ 2.02
SMYD3-210ENST00000470863 CHMP7Q8WUX9 453 aaPredicted RBP27.62■■■□□ 2.01
SMYD3-210ENST00000470863 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
SMYD3-210ENST00000470863 PBRM1Q86U86 1689 aa27.58■■■□□ 2.01
SMYD3-210ENST00000470863 SYNJ2O15056 1496 aa27.57■■■□□ 2
SMYD3-210ENST00000470863 TRIM41Q8WV44 630 aa27.54■■■□□ 2
SMYD3-210ENST00000470863 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
SMYD3-210ENST00000470863 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
SMYD3-210ENST00000470863 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
SMYD3-210ENST00000470863 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
SMYD3-210ENST00000470863 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
SMYD3-210ENST00000470863 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
SMYD3-210ENST00000470863 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
SMYD3-210ENST00000470863 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
SMYD3-210ENST00000470863 GRIN2AQ12879 1464 aa27.36■■□□□ 1.97
SMYD3-210ENST00000470863 KIF27Q86VH2 1401 aa27.3■■□□□ 1.96
SMYD3-210ENST00000470863 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
SMYD3-210ENST00000470863 NUP160Q12769 1436 aa27.24■■□□□ 1.95
SMYD3-210ENST00000470863 ARAP1Q96P48 1450 aa27.23■■□□□ 1.95
SMYD3-210ENST00000470863 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
SMYD3-210ENST00000470863 IGF1RP08069 1367 aa27.18■■□□□ 1.94
SMYD3-210ENST00000470863 CUL7Q14999 1698 aa27.11■■□□□ 1.93
SMYD3-210ENST00000470863 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
SMYD3-210ENST00000470863 SHROOM2Q13796 1616 aa27.01■■□□□ 1.92
SMYD3-210ENST00000470863 JPH4Q96JJ6 628 aa26.99■■□□□ 1.91
SMYD3-210ENST00000470863 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms