RNA–Protein interactions for RNA: ENST00000403792.7

SMYD3-204, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SMYD3, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-204ENST00000403792 NISCHQ9Y2I1 1504 aa45.05■■■■■ 4.8
SMYD3-204ENST00000403792 ABCC9O60706 1549 aa40.71■■■■■ 4.11
SMYD3-204ENST00000403792 CCDC180Q9P1Z9 1646 aa40.5■■■■■ 4.07
SMYD3-204ENST00000403792 RB1CC1Q8TDY2 1594 aa38.67■■■■□ 3.78
SMYD3-204ENST00000403792 DNAJC5BQ9UF47 199 aa38.46■■■■□ 3.75
SMYD3-204ENST00000403792 NACADO15069 1562 aa38.37■■■■□ 3.73
SMYD3-204ENST00000403792 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
SMYD3-204ENST00000403792 PABPN1Q86U42 306 aaKnown RBP eCLIP37.87■■■■□ 3.65
SMYD3-204ENST00000403792 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.64
SMYD3-204ENST00000403792 UNC13AQ9UPW8 1703 aa37.76■■■■□ 3.64
SMYD3-204ENST00000403792 BICRAQ9NZM4 1560 aa37.59■■■■□ 3.61
SMYD3-204ENST00000403792 ZCCHC6Q5VYS8 1495 aaKnown RBP37.28■■■■□ 3.56
SMYD3-204ENST00000403792 DCAF1Q9Y4B6 1507 aa37.23■■■■□ 3.55
SMYD3-204ENST00000403792 SHROOM4Q9ULL8 1493 aa37.08■■■■□ 3.53
SMYD3-204ENST00000403792 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
SMYD3-204ENST00000403792 CC2D2AQ9P2K1 1620 aa36.77■■■■□ 3.48
SMYD3-204ENST00000403792 CECR2Q9BXF3 1484 aa36.72■■■■□ 3.47
SMYD3-204ENST00000403792 EIF4G1Q04637 1599 aaKnown RBP36.66■■■■□ 3.46
SMYD3-204ENST00000403792 DNAJC5Q9H3Z4 198 aa35.5■■■■□ 3.27
SMYD3-204ENST00000403792 NCAPD3P42695 1498 aa35.46■■■■□ 3.27
SMYD3-204ENST00000403792 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
SMYD3-204ENST00000403792 CUX2O14529 1486 aa35.23■■■■□ 3.23
SMYD3-204ENST00000403792 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
SMYD3-204ENST00000403792 SMARCA2P51531 1590 aa35.16■■■■□ 3.22
SMYD3-204ENST00000403792 ERCC6Q03468 1493 aa35.15■■■■□ 3.22
SMYD3-204ENST00000403792 HMGXB3Q12766 1538 aa35.14■■■■□ 3.22
SMYD3-204ENST00000403792 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
SMYD3-204ENST00000403792 NESP48681 1621 aa34.92■■■■□ 3.18
SMYD3-204ENST00000403792 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
SMYD3-204ENST00000403792 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
SMYD3-204ENST00000403792 MROH2BQ7Z745 1585 aa34.7■■■■□ 3.14
SMYD3-204ENST00000403792 LAMC3Q9Y6N6 1575 aa34.66■■■■□ 3.14
SMYD3-204ENST00000403792 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
SMYD3-204ENST00000403792 PDS5BQ9NTI5 1447 aa34.47■■■■□ 3.11
SMYD3-204ENST00000403792 KIF21AQ7Z4S6 1674 aa34.42■■■■□ 3.1
SMYD3-204ENST00000403792 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
SMYD3-204ENST00000403792 WIZO95785 1651 aa34.24■■■■□ 3.07
SMYD3-204ENST00000403792 MRC2Q9UBG0 1479 aa34.18■■■■□ 3.06
SMYD3-204ENST00000403792 WDR62O43379 1518 aa34.11■■■■□ 3.05
SMYD3-204ENST00000403792 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
SMYD3-204ENST00000403792 CEP164Q9UPV0 1460 aa33.98■■■■□ 3.03
SMYD3-204ENST00000403792 FANCD2Q9BXW9 1451 aa33.94■■■■□ 3.02
SMYD3-204ENST00000403792 CFTRP13569 1480 aa33.91■■■■□ 3.02
SMYD3-204ENST00000403792 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3
SMYD3-204ENST00000403792 TRIM41Q8WV44 630 aa33.75■■■□□ 2.99
SMYD3-204ENST00000403792 URB2Q14146 1524 aaKnown RBP33.68■■■□□ 2.98
SMYD3-204ENST00000403792 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
SMYD3-204ENST00000403792 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
SMYD3-204ENST00000403792 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
SMYD3-204ENST00000403792 IFT140Q96RY7 1462 aa33.33■■■□□ 2.93
SMYD3-204ENST00000403792 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
SMYD3-204ENST00000403792 TOPBP1Q92547 1522 aa33.27■■■□□ 2.92
SMYD3-204ENST00000403792 ABCC8Q09428 1581 aa33.19■■■□□ 2.9
SMYD3-204ENST00000403792 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
SMYD3-204ENST00000403792 RIMBP3CA6NJZ7 1639 aa33.14■■■□□ 2.9
SMYD3-204ENST00000403792 RIMBP3BA6NNM3 1639 aa33.14■■■□□ 2.9
SMYD3-204ENST00000403792 RIMBP3Q9UFD9 1639 aa33.14■■■□□ 2.9
SMYD3-204ENST00000403792 DNMBPQ6XZF7 1577 aa33.12■■■□□ 2.89
SMYD3-204ENST00000403792 EIF4G3O43432 1585 aaKnown RBP33.08■■■□□ 2.89
SMYD3-204ENST00000403792 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
SMYD3-204ENST00000403792 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
SMYD3-204ENST00000403792 AQRO60306 1485 aaKnown RBP eCLIP32.96■■■□□ 2.87
SMYD3-204ENST00000403792 POLA1P09884 1462 aaPredicted RBP32.92■■■□□ 2.86
SMYD3-204ENST00000403792 CHD1O14646 1710 aa32.85■■■□□ 2.85
SMYD3-204ENST00000403792 RAD54L2Q9Y4B4 1467 aa32.79■■■□□ 2.84
SMYD3-204ENST00000403792 CYB5RLQ6IPT4 315 aa32.78■■■□□ 2.84
SMYD3-204ENST00000403792 SOGA1O94964 1423 aa32.77■■■□□ 2.84
SMYD3-204ENST00000403792 FBLN2P98095 1184 aa32.73■■■□□ 2.83
SMYD3-204ENST00000403792 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
SMYD3-204ENST00000403792 ARAP1Q96P48 1450 aa32.69■■■□□ 2.82
SMYD3-204ENST00000403792 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
SMYD3-204ENST00000403792 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
SMYD3-204ENST00000403792 CUX1P39880 1505 aa32.61■■■□□ 2.81
SMYD3-204ENST00000403792 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
SMYD3-204ENST00000403792 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
SMYD3-204ENST00000403792 CLASP1Q7Z460 1538 aa32.53■■■□□ 2.8
SMYD3-204ENST00000403792 GRIN2BQ13224 1484 aa32.5■■■□□ 2.79
SMYD3-204ENST00000403792 CHMP7Q8WUX9 453 aaPredicted RBP32.49■■■□□ 2.79
SMYD3-204ENST00000403792 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
SMYD3-204ENST00000403792 TRHP20396 242 aaPredicted RBP32.45■■■□□ 2.79
SMYD3-204ENST00000403792 SYNJ2O15056 1496 aa32.42■■■□□ 2.78
SMYD3-204ENST00000403792 GAPVD1Q14C86 1478 aa32.35■■■□□ 2.77
SMYD3-204ENST00000403792 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
SMYD3-204ENST00000403792 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
SMYD3-204ENST00000403792 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
SMYD3-204ENST00000403792 WRNQ14191 1432 aaPredicted RBP eCLIP32.12■■■□□ 2.73
SMYD3-204ENST00000403792 GRIN2AQ12879 1464 aa32.09■■■□□ 2.73
SMYD3-204ENST00000403792 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
SMYD3-204ENST00000403792 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
SMYD3-204ENST00000403792 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
SMYD3-204ENST00000403792 NUP160Q12769 1436 aa32.01■■■□□ 2.72
SMYD3-204ENST00000403792 ERCC6L2Q5T890 1561 aa31.98■■■□□ 2.71
SMYD3-204ENST00000403792 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
SMYD3-204ENST00000403792 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.71
SMYD3-204ENST00000403792 ERICH3Q5RHP9 1530 aa31.89■■■□□ 2.7
SMYD3-204ENST00000403792 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
SMYD3-204ENST00000403792 PRG4Q92954 1404 aaPredicted RBP31.69■■■□□ 2.66
SMYD3-204ENST00000403792 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
SMYD3-204ENST00000403792 JPH4Q96JJ6 628 aa31.67■■■□□ 2.66
SMYD3-204ENST00000403792 RUSC2Q8N2Y8 1516 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms