RNA–Protein interactions for RNA: ENST00000455277.2

SMYD3-206, Transcript of SET and MYND domain containing 3, humanhuman

TSL 5

Gene SMYD3, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-206ENST00000455277 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
SMYD3-206ENST00000455277 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
SMYD3-206ENST00000455277 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
SMYD3-206ENST00000455277 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
SMYD3-206ENST00000455277 ABCC9O60706 1549 aa19.27■□□□□ 0.68
SMYD3-206ENST00000455277 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
SMYD3-206ENST00000455277 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
SMYD3-206ENST00000455277 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
SMYD3-206ENST00000455277 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
SMYD3-206ENST00000455277 NACADO15069 1562 aa18.38■□□□□ 0.53
SMYD3-206ENST00000455277 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
SMYD3-206ENST00000455277 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
SMYD3-206ENST00000455277 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
SMYD3-206ENST00000455277 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMYD3-206ENST00000455277 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
SMYD3-206ENST00000455277 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
SMYD3-206ENST00000455277 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
SMYD3-206ENST00000455277 SCRIBQ14160 1630 aa17.83■□□□□ 0.44
SMYD3-206ENST00000455277 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
SMYD3-206ENST00000455277 FOXD1Q16676 465 aa17.61■□□□□ 0.41
SMYD3-206ENST00000455277 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
SMYD3-206ENST00000455277 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
SMYD3-206ENST00000455277 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SMYD3-206ENST00000455277 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
SMYD3-206ENST00000455277 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
SMYD3-206ENST00000455277 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
SMYD3-206ENST00000455277 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
SMYD3-206ENST00000455277 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
SMYD3-206ENST00000455277 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
SMYD3-206ENST00000455277 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
SMYD3-206ENST00000455277 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
SMYD3-206ENST00000455277 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
SMYD3-206ENST00000455277 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
SMYD3-206ENST00000455277 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
SMYD3-206ENST00000455277 WIZO95785 1651 aa16.73■□□□□ 0.27
SMYD3-206ENST00000455277 NESP48681 1621 aa16.65■□□□□ 0.26
SMYD3-206ENST00000455277 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
SMYD3-206ENST00000455277 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
SMYD3-206ENST00000455277 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
SMYD3-206ENST00000455277 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
SMYD3-206ENST00000455277 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
SMYD3-206ENST00000455277 MSH5O43196 834 aa16.48■□□□□ 0.23
SMYD3-206ENST00000455277 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
SMYD3-206ENST00000455277 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
SMYD3-206ENST00000455277 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
SMYD3-206ENST00000455277 CFTRP13569 1480 aa16.42■□□□□ 0.22
SMYD3-206ENST00000455277 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
SMYD3-206ENST00000455277 ADRA2BP18089 450 aa16.41■□□□□ 0.22
SMYD3-206ENST00000455277 CUX2O14529 1486 aa16.41■□□□□ 0.22
SMYD3-206ENST00000455277 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
SMYD3-206ENST00000455277 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
SMYD3-206ENST00000455277 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
SMYD3-206ENST00000455277 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
SMYD3-206ENST00000455277 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
SMYD3-206ENST00000455277 WDR62O43379 1518 aa16.2■□□□□ 0.18
SMYD3-206ENST00000455277 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
SMYD3-206ENST00000455277 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
SMYD3-206ENST00000455277 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
SMYD3-206ENST00000455277 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
SMYD3-206ENST00000455277 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
SMYD3-206ENST00000455277 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
SMYD3-206ENST00000455277 DNMBPQ6XZF7 1577 aa15.98■□□□□ 0.15
SMYD3-206ENST00000455277 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
SMYD3-206ENST00000455277 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
SMYD3-206ENST00000455277 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
SMYD3-206ENST00000455277 SOGA1O94964 1423 aa15.91■□□□□ 0.14
SMYD3-206ENST00000455277 CUX1P39880 1505 aa15.9■□□□□ 0.14
SMYD3-206ENST00000455277 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
SMYD3-206ENST00000455277 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMYD3-206ENST00000455277 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
SMYD3-206ENST00000455277 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
SMYD3-206ENST00000455277 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
SMYD3-206ENST00000455277 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
SMYD3-206ENST00000455277 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
SMYD3-206ENST00000455277 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
SMYD3-206ENST00000455277 FBLN2P98095 1184 aa15.76■□□□□ 0.11
SMYD3-206ENST00000455277 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
SMYD3-206ENST00000455277 TOP2BQ02880 1626 aa15.71■□□□□ 0.11
SMYD3-206ENST00000455277 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
SMYD3-206ENST00000455277 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
SMYD3-206ENST00000455277 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
SMYD3-206ENST00000455277 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
SMYD3-206ENST00000455277 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
SMYD3-206ENST00000455277 BIVM-ERCC5R4GMW8 1640 aa15.66■□□□□ 0.1
SMYD3-206ENST00000455277 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
SMYD3-206ENST00000455277 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
SMYD3-206ENST00000455277 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
SMYD3-206ENST00000455277 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
SMYD3-206ENST00000455277 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
SMYD3-206ENST00000455277 CHD1O14646 1710 aa15.54■□□□□ 0.08
SMYD3-206ENST00000455277 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
SMYD3-206ENST00000455277 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
SMYD3-206ENST00000455277 KIF27Q86VH2 1401 aa15.49■□□□□ 0.07
SMYD3-206ENST00000455277 IGF1RP08069 1367 aa15.49■□□□□ 0.07
SMYD3-206ENST00000455277 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
SMYD3-206ENST00000455277 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
SMYD3-206ENST00000455277 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
SMYD3-206ENST00000455277 GRIN2AQ12879 1464 aa15.46■□□□□ 0.06
SMYD3-206ENST00000455277 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
SMYD3-206ENST00000455277 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms