RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 NISCHQ9Y2I1 1504 aa45.14■■■■■ 4.82
ESRRA-202ENST00000405666 CCDC180Q9P1Z9 1646 aa38.98■■■■□ 3.83
ESRRA-202ENST00000405666 ZCCHC6Q5VYS8 1495 aaKnown RBP38.04■■■■□ 3.68
ESRRA-202ENST00000405666 SHROOM4Q9ULL8 1493 aa37.35■■■■□ 3.57
ESRRA-202ENST00000405666 DCAF1Q9Y4B6 1507 aa37.26■■■■□ 3.56
ESRRA-202ENST00000405666 DCAF8L2P0C7V8 631 aa37.19■■■■□ 3.54
ESRRA-202ENST00000405666 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
ESRRA-202ENST00000405666 ABCC9O60706 1549 aa36.52■■■■□ 3.44
ESRRA-202ENST00000405666 NACADO15069 1562 aa36.21■■■■□ 3.39
ESRRA-202ENST00000405666 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
ESRRA-202ENST00000405666 SCRIBQ14160 1630 aa36.06■■■■□ 3.36
ESRRA-202ENST00000405666 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.32
ESRRA-202ENST00000405666 RSF1Q96T23 1441 aaPredicted RBP35.29■■■■□ 3.24
ESRRA-202ENST00000405666 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
ESRRA-202ENST00000405666 CECR2Q9BXF3 1484 aa35.12■■■■□ 3.21
ESRRA-202ENST00000405666 MROH2BQ7Z745 1585 aa34.95■■■■□ 3.19
ESRRA-202ENST00000405666 CHIC1Q5VXU3 224 aa34.94■■■■□ 3.18
ESRRA-202ENST00000405666 BICRAQ9NZM4 1560 aa34.78■■■■□ 3.16
ESRRA-202ENST00000405666 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
ESRRA-202ENST00000405666 WIZO95785 1651 aa34.68■■■■□ 3.14
ESRRA-202ENST00000405666 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.13
ESRRA-202ENST00000405666 SMARCA4P51532 1647 aa34.56■■■■□ 3.12
ESRRA-202ENST00000405666 TOP2AP11388 1531 aaKnown RBP34.27■■■■□ 3.08
ESRRA-202ENST00000405666 PEG3Q9GZU2 1588 aa34.1■■■■□ 3.05
ESRRA-202ENST00000405666 SMARCA2P51531 1590 aa34■■■■□ 3.03
ESRRA-202ENST00000405666 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
ESRRA-202ENST00000405666 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
ESRRA-202ENST00000405666 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
ESRRA-202ENST00000405666 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
ESRRA-202ENST00000405666 BAZ1BQ9UIG0 1483 aaKnown RBP33.7■■■□□ 2.99
ESRRA-202ENST00000405666 LOC105371045A0A1W2PR82 267 aa33.69■■■□□ 2.98
ESRRA-202ENST00000405666 ABCC8Q09428 1581 aa33.5■■■□□ 2.95
ESRRA-202ENST00000405666 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
ESRRA-202ENST00000405666 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
ESRRA-202ENST00000405666 FAM9AQ8IZU1 332 aaPredicted RBP33.41■■■□□ 2.94
ESRRA-202ENST00000405666 WRNQ14191 1432 aaPredicted RBP eCLIP33.17■■■□□ 2.9
ESRRA-202ENST00000405666 SYNJ1O43426 1573 aa33.03■■■□□ 2.88
ESRRA-202ENST00000405666 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
ESRRA-202ENST00000405666 SOGA1O94964 1423 aa33.01■■■□□ 2.87
ESRRA-202ENST00000405666 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
ESRRA-202ENST00000405666 EEA1Q15075 1411 aa32.92■■■□□ 2.86
ESRRA-202ENST00000405666 CFTRP13569 1480 aa32.91■■■□□ 2.86
ESRRA-202ENST00000405666 PELP1Q8IZL8 1130 aaKnown RBP32.88■■■□□ 2.85
ESRRA-202ENST00000405666 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
ESRRA-202ENST00000405666 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
ESRRA-202ENST00000405666 CSRNP3Q8WYN3 585 aa32.77■■■□□ 2.84
ESRRA-202ENST00000405666 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
ESRRA-202ENST00000405666 PCGF6Q9BYE7 350 aa32.71■■■□□ 2.83
ESRRA-202ENST00000405666 CADPSQ9ULU8 1353 aa32.68■■■□□ 2.82
ESRRA-202ENST00000405666 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
ESRRA-202ENST00000405666 CUX1P39880 1505 aa32.63■■■□□ 2.81
ESRRA-202ENST00000405666 TNIKQ9UKE5 1360 aa32.56■■■□□ 2.8
ESRRA-202ENST00000405666 GOLGA3Q08378 1498 aa32.54■■■□□ 2.8
ESRRA-202ENST00000405666 TRIM26Q12899 539 aaPredicted RBP32.5■■■□□ 2.79
ESRRA-202ENST00000405666 KIF21BO75037 1637 aa32.49■■■□□ 2.79
ESRRA-202ENST00000405666 CEP164Q9UPV0 1460 aa32.47■■■□□ 2.79
ESRRA-202ENST00000405666 CEP162Q5TB80 1403 aa32.46■■■□□ 2.79
ESRRA-202ENST00000405666 UBTFP17480 764 aaKnown RBP32.41■■■□□ 2.78
ESRRA-202ENST00000405666 FANCD2Q9BXW9 1451 aa32.32■■■□□ 2.76
ESRRA-202ENST00000405666 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
ESRRA-202ENST00000405666 NESP48681 1621 aa32.27■■■□□ 2.76
ESRRA-202ENST00000405666 KIF27Q86VH2 1401 aa32.25■■■□□ 2.75
ESRRA-202ENST00000405666 PRXQ9BXM0 1461 aa32.22■■■□□ 2.75
ESRRA-202ENST00000405666 HRCP23327 699 aa32.2■■■□□ 2.75
ESRRA-202ENST00000405666 DNAJC5BQ9UF47 199 aa32.2■■■□□ 2.75
ESRRA-202ENST00000405666 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
ESRRA-202ENST00000405666 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
ESRRA-202ENST00000405666 ERICH3Q5RHP9 1530 aa32.16■■■□□ 2.74
ESRRA-202ENST00000405666 MYT1Q01538 1121 aa32.15■■■□□ 2.74
ESRRA-202ENST00000405666 DNMBPQ6XZF7 1577 aa32.09■■■□□ 2.73
ESRRA-202ENST00000405666 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.73
ESRRA-202ENST00000405666 CUX2O14529 1486 aa32.07■■■□□ 2.72
ESRRA-202ENST00000405666 CLIP1P30622 1438 aa32.06■■■□□ 2.72
ESRRA-202ENST00000405666 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
ESRRA-202ENST00000405666 IGF1RP08069 1367 aa31.97■■■□□ 2.71
ESRRA-202ENST00000405666 PDS5BQ9NTI5 1447 aa31.95■■■□□ 2.7
ESRRA-202ENST00000405666 POLA1P09884 1462 aaPredicted RBP31.94■■■□□ 2.7
ESRRA-202ENST00000405666 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
ESRRA-202ENST00000405666 RAD54L2Q9Y4B4 1467 aa31.88■■■□□ 2.69
ESRRA-202ENST00000405666 ABCA10Q8WWZ4 1543 aa31.87■■■□□ 2.69
ESRRA-202ENST00000405666 VPS8Q8N3P4 1428 aa31.86■■■□□ 2.69
ESRRA-202ENST00000405666 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
ESRRA-202ENST00000405666 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
ESRRA-202ENST00000405666 RANGAP1P46060 587 aaPredicted RBP31.79■■■□□ 2.68
ESRRA-202ENST00000405666 ARAP1Q96P48 1450 aa31.7■■■□□ 2.67
ESRRA-202ENST00000405666 TTBK1Q5TCY1 1321 aaPredicted RBP31.69■■■□□ 2.66
ESRRA-202ENST00000405666 WDR97A6NE52 1622 aa31.69■■■□□ 2.66
ESRRA-202ENST00000405666 ARHGAP35Q9NRY4 1499 aa31.6■■■□□ 2.65
ESRRA-202ENST00000405666 CUL7Q14999 1698 aa31.56■■■□□ 2.64
ESRRA-202ENST00000405666 ABCA5Q8WWZ7 1642 aa31.56■■■□□ 2.64
ESRRA-202ENST00000405666 TDRD9Q8NDG6 1382 aaKnown RBP31.52■■■□□ 2.64
ESRRA-202ENST00000405666 MRC2Q9UBG0 1479 aa31.51■■■□□ 2.64
ESRRA-202ENST00000405666 APLP2Q06481 763 aa31.51■■■□□ 2.63
ESRRA-202ENST00000405666 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
ESRRA-202ENST00000405666 GAPVD1Q14C86 1478 aa31.48■■■□□ 2.63
ESRRA-202ENST00000405666 ZEB1P37275 1124 aaPredicted RBP31.42■■■□□ 2.62
ESRRA-202ENST00000405666 WDR62O43379 1518 aa31.33■■■□□ 2.61
ESRRA-202ENST00000405666 CTTNBP2Q8WZ74 1663 aa31.3■■■□□ 2.6
ESRRA-202ENST00000405666 KANK4Q5T7N3 995 aaPredicted RBP31.26■■■□□ 2.59
ESRRA-202ENST00000405666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms