RNA–Protein interactions for RNA: ENST00000354700.9

ACAP3-202, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACAP3, Length 3,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-202ENST00000354700 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
ACAP3-202ENST00000354700 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
ACAP3-202ENST00000354700 SUPT5HO00267 1087 aaKnown RBP32.04■■■□□ 2.72
ACAP3-202ENST00000354700 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
ACAP3-202ENST00000354700 PCGF6Q9BYE7 350 aa30.78■■■□□ 2.52
ACAP3-202ENST00000354700 EHMT2Q96KQ7 1210 aa30.47■■■□□ 2.47
ACAP3-202ENST00000354700 PPARGC1BQ86YN6 1023 aaKnown RBP30.3■■■□□ 2.44
ACAP3-202ENST00000354700 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
ACAP3-202ENST00000354700 HRCP23327 699 aa30.17■■■□□ 2.42
ACAP3-202ENST00000354700 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
ACAP3-202ENST00000354700 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
ACAP3-202ENST00000354700 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
ACAP3-202ENST00000354700 TTBK1Q5TCY1 1321 aaPredicted RBP29.46■■■□□ 2.31
ACAP3-202ENST00000354700 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
ACAP3-202ENST00000354700 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
ACAP3-202ENST00000354700 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
ACAP3-202ENST00000354700 CCER1Q8TC90 406 aaPredicted RBP28.8■■■□□ 2.2
ACAP3-202ENST00000354700 ZEB1P37275 1124 aaPredicted RBP28.73■■■□□ 2.19
ACAP3-202ENST00000354700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.73■■■□□ 2.19
ACAP3-202ENST00000354700 RANGAP1P46060 587 aaPredicted RBP28.51■■■□□ 2.16
ACAP3-202ENST00000354700 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
ACAP3-202ENST00000354700 YTHDC1Q96MU7 727 aaKnown RBP28.48■■■□□ 2.15
ACAP3-202ENST00000354700 SCAF1Q9H7N4 1312 aaKnown RBP28.34■■■□□ 2.13
ACAP3-202ENST00000354700 UBTFP17480 764 aaKnown RBP28.26■■■□□ 2.11
ACAP3-202ENST00000354700 CENPBP07199 599 aaPredicted RBP28.13■■■□□ 2.09
ACAP3-202ENST00000354700 PELP1Q8IZL8 1130 aaKnown RBP28.13■■■□□ 2.09
ACAP3-202ENST00000354700 DIEXFQ68CQ4 756 aaKnown RBP28.11■■■□□ 2.09
ACAP3-202ENST00000354700 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
ACAP3-202ENST00000354700 GTF3C3Q9Y5Q9 886 aa28.07■■■□□ 2.08
ACAP3-202ENST00000354700 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
ACAP3-202ENST00000354700 SCRIBQ14160 1630 aa28.01■■■□□ 2.08
ACAP3-202ENST00000354700 NEUROD1Q13562 356 aa28.01■■■□□ 2.07
ACAP3-202ENST00000354700 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
ACAP3-202ENST00000354700 ABCC9O60706 1549 aa27.9■■■□□ 2.06
ACAP3-202ENST00000354700 ACIN1Q9UKV3 1341 aaKnown RBP27.89■■■□□ 2.06
ACAP3-202ENST00000354700 APLP2Q06481 763 aa27.86■■■□□ 2.05
ACAP3-202ENST00000354700 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
ACAP3-202ENST00000354700 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 23e-7■■■■■ 27.3
ACAP3-202ENST00000354700 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
ACAP3-202ENST00000354700 ITGAEP38570 1179 aa27.54■■■□□ 2
ACAP3-202ENST00000354700 ZNF316A6NFI3 1004 aaPredicted RBP27.47■■□□□ 1.99
ACAP3-202ENST00000354700 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
ACAP3-202ENST00000354700 MIER1Q8N108 512 aa27.36■■□□□ 1.97
ACAP3-202ENST00000354700 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
ACAP3-202ENST00000354700 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
ACAP3-202ENST00000354700 CEP162Q5TB80 1403 aa27.14■■□□□ 1.94
ACAP3-202ENST00000354700 SOGA1O94964 1423 aa27.11■■□□□ 1.93
ACAP3-202ENST00000354700 BCANQ96GW7 911 aa27.1■■□□□ 1.93
ACAP3-202ENST00000354700 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
ACAP3-202ENST00000354700 CCDC88BA6NC98 1476 aa27.02■■□□□ 1.92
ACAP3-202ENST00000354700 WIZO95785 1651 aa26.98■■□□□ 1.91
ACAP3-202ENST00000354700 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
ACAP3-202ENST00000354700 TNIKQ9UKE5 1360 aa26.76■■□□□ 1.87
ACAP3-202ENST00000354700 MYT1Q01538 1121 aa26.75■■□□□ 1.87
ACAP3-202ENST00000354700 HIRIP3Q9BW71 556 aaPredicted RBP26.74■■□□□ 1.87
ACAP3-202ENST00000354700 CLIP1P30622 1438 aa26.7■■□□□ 1.87
ACAP3-202ENST00000354700 FAM50AQ14320 339 aaKnown RBP26.7■■□□□ 1.86
ACAP3-202ENST00000354700 P3H3Q8IVL6 736 aa26.68■■□□□ 1.86
ACAP3-202ENST00000354700 CNGB1Q14028 1251 aaPredicted RBP26.66■■□□□ 1.86
ACAP3-202ENST00000354700 NEFLP07196 543 aa26.6■■□□□ 1.85
ACAP3-202ENST00000354700 DDX10Q13206 875 aaKnown RBP26.59■■□□□ 1.85
ACAP3-202ENST00000354700 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
ACAP3-202ENST00000354700 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.844e-7■■■□□ 16.7
ACAP3-202ENST00000354700 NACADO15069 1562 aa26.5■■□□□ 1.83
ACAP3-202ENST00000354700 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
ACAP3-202ENST00000354700 FKBP8Q14318 412 aa26.49■■□□□ 1.83
ACAP3-202ENST00000354700 KCNH8Q96L42 1107 aa26.49■■□□□ 1.83
ACAP3-202ENST00000354700 BAZ1AQ9NRL2 1556 aaPredicted RBP26.49■■□□□ 1.83
ACAP3-202ENST00000354700 TRIM52Q96A61 297 aa26.49■■□□□ 1.83
ACAP3-202ENST00000354700 SUPT16HQ9Y5B9 1047 aaKnown RBP26.46■■□□□ 1.83
ACAP3-202ENST00000354700 SIN3AQ96ST3 1273 aa26.35■■□□□ 1.81
ACAP3-202ENST00000354700 EEA1Q15075 1411 aa26.32■■□□□ 1.8
ACAP3-202ENST00000354700 ERICH6Q7L0X2 663 aa26.3■■□□□ 1.8
ACAP3-202ENST00000354700 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
ACAP3-202ENST00000354700 IRX6P78412 446 aaPredicted RBP26.27■■□□□ 1.8
ACAP3-202ENST00000354700 POLR3GLQ9BT43 218 aa26.26■■□□□ 1.79
ACAP3-202ENST00000354700 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
ACAP3-202ENST00000354700 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
ACAP3-202ENST00000354700 ARID3CA6NKF2 412 aa26.2■■□□□ 1.79
ACAP3-202ENST00000354700 TOP2AP11388 1531 aaKnown RBP26.2■■□□□ 1.79
ACAP3-202ENST00000354700 ANP32CO43423 234 aa26.19■■□□□ 1.78
ACAP3-202ENST00000354700 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
ACAP3-202ENST00000354700 TSHZ2Q9NRE2 1034 aa26.11■■□□□ 1.77
ACAP3-202ENST00000354700 SENP3-EIF4A1A0A087X0R7 540 aa26.11■■□□□ 1.77
ACAP3-202ENST00000354700 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
ACAP3-202ENST00000354700 SMARCA4P51532 1647 aa26.04■■□□□ 1.76
ACAP3-202ENST00000354700 HNRNPUQ00839 825 aaKnown RBP eCLIP26.02■■□□□ 1.76
ACAP3-202ENST00000354700 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
ACAP3-202ENST00000354700 CHIC2Q9UKJ5 165 aa25.96■■□□□ 1.75
ACAP3-202ENST00000354700 CCNB3Q8WWL7 1395 aa25.96■■□□□ 1.75
ACAP3-202ENST00000354700 ANP32EQ9BTT0 268 aa25.92■■□□□ 1.74
ACAP3-202ENST00000354700 RAB3GAP2Q9H2M9 1393 aa25.88■■□□□ 1.73
ACAP3-202ENST00000354700 FAM9BQ8IZU0 186 aa25.87■■□□□ 1.73
ACAP3-202ENST00000354700 ZNF326Q5BKZ1 582 aaKnown RBP25.86■■□□□ 1.73
ACAP3-202ENST00000354700 TONSLQ96HA7 1378 aa25.85■■□□□ 1.73
ACAP3-202ENST00000354700 CLSPNQ9HAW4 1339 aa25.83■■□□□ 1.73
ACAP3-202ENST00000354700 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
ACAP3-202ENST00000354700 CDK11AQ9UQ88 783 aaPredicted RBP25.79■■□□□ 1.72
ACAP3-202ENST00000354700 KIF21BO75037 1637 aa25.78■■□□□ 1.72
ACAP3-202ENST00000354700 RRP7BPQ9NSQ0 103 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms