RNA–Protein interactions for RNA: ENST00000462422.5

SMYD3-207, Transcript of SET and MYND domain containing 3, humanhuman

TSL 5

Gene SMYD3, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-207ENST00000462422 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
SMYD3-207ENST00000462422 AEBP2Q6ZN18 517 aaPredicted RBP30■■■□□ 2.39
SMYD3-207ENST00000462422 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
SMYD3-207ENST00000462422 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
SMYD3-207ENST00000462422 ABCC9O60706 1549 aa27.72■■■□□ 2.03
SMYD3-207ENST00000462422 DNAJC5BQ9UF47 199 aa26.59■■□□□ 1.85
SMYD3-207ENST00000462422 NACADO15069 1562 aa26.32■■□□□ 1.8
SMYD3-207ENST00000462422 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
SMYD3-207ENST00000462422 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SMYD3-207ENST00000462422 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
SMYD3-207ENST00000462422 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
SMYD3-207ENST00000462422 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
SMYD3-207ENST00000462422 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMYD3-207ENST00000462422 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
SMYD3-207ENST00000462422 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
SMYD3-207ENST00000462422 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
SMYD3-207ENST00000462422 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
SMYD3-207ENST00000462422 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
SMYD3-207ENST00000462422 SCRIBQ14160 1630 aa25.39■■□□□ 1.66
SMYD3-207ENST00000462422 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
SMYD3-207ENST00000462422 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
SMYD3-207ENST00000462422 EIF4G1Q04637 1599 aaKnown RBP24.83■■□□□ 1.57
SMYD3-207ENST00000462422 DNAJC5Q9H3Z4 198 aa24.8■■□□□ 1.56
SMYD3-207ENST00000462422 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
SMYD3-207ENST00000462422 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
SMYD3-207ENST00000462422 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
SMYD3-207ENST00000462422 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
SMYD3-207ENST00000462422 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
SMYD3-207ENST00000462422 PEG3Q9GZU2 1588 aa24.22■■□□□ 1.47
SMYD3-207ENST00000462422 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
SMYD3-207ENST00000462422 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
SMYD3-207ENST00000462422 CUX2O14529 1486 aa24.09■■□□□ 1.45
SMYD3-207ENST00000462422 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
SMYD3-207ENST00000462422 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
SMYD3-207ENST00000462422 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
SMYD3-207ENST00000462422 WIZO95785 1651 aa23.86■■□□□ 1.41
SMYD3-207ENST00000462422 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
SMYD3-207ENST00000462422 FOXD1Q16676 465 aa23.67■■□□□ 1.38
SMYD3-207ENST00000462422 NESP48681 1621 aa23.66■■□□□ 1.38
SMYD3-207ENST00000462422 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
SMYD3-207ENST00000462422 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
SMYD3-207ENST00000462422 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
SMYD3-207ENST00000462422 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
SMYD3-207ENST00000462422 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
SMYD3-207ENST00000462422 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
SMYD3-207ENST00000462422 CFTRP13569 1480 aa23.44■■□□□ 1.34
SMYD3-207ENST00000462422 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
SMYD3-207ENST00000462422 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
SMYD3-207ENST00000462422 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
SMYD3-207ENST00000462422 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
SMYD3-207ENST00000462422 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
SMYD3-207ENST00000462422 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
SMYD3-207ENST00000462422 WDR62O43379 1518 aa23.15■■□□□ 1.3
SMYD3-207ENST00000462422 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
SMYD3-207ENST00000462422 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
SMYD3-207ENST00000462422 OSCARQ8IYS5 282 aa23■■□□□ 1.27
SMYD3-207ENST00000462422 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
SMYD3-207ENST00000462422 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
SMYD3-207ENST00000462422 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
SMYD3-207ENST00000462422 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
SMYD3-207ENST00000462422 CUX1P39880 1505 aa22.69■■□□□ 1.22
SMYD3-207ENST00000462422 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
SMYD3-207ENST00000462422 PPP6R1Q9UPN7 881 aa22.64■■□□□ 1.21
SMYD3-207ENST00000462422 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
SMYD3-207ENST00000462422 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
SMYD3-207ENST00000462422 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
SMYD3-207ENST00000462422 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
SMYD3-207ENST00000462422 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
SMYD3-207ENST00000462422 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
SMYD3-207ENST00000462422 SOGA1O94964 1423 aa22.59■■□□□ 1.21
SMYD3-207ENST00000462422 ADRA2BP18089 450 aa22.59■■□□□ 1.21
SMYD3-207ENST00000462422 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
SMYD3-207ENST00000462422 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
SMYD3-207ENST00000462422 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
SMYD3-207ENST00000462422 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
SMYD3-207ENST00000462422 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
SMYD3-207ENST00000462422 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
SMYD3-207ENST00000462422 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
SMYD3-207ENST00000462422 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
SMYD3-207ENST00000462422 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMYD3-207ENST00000462422 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
SMYD3-207ENST00000462422 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
SMYD3-207ENST00000462422 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
SMYD3-207ENST00000462422 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
SMYD3-207ENST00000462422 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
SMYD3-207ENST00000462422 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
SMYD3-207ENST00000462422 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.17
SMYD3-207ENST00000462422 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
SMYD3-207ENST00000462422 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
SMYD3-207ENST00000462422 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
SMYD3-207ENST00000462422 FBLN2P98095 1184 aa22.26■■□□□ 1.15
SMYD3-207ENST00000462422 PIAS4Q8N2W9 510 aaPredicted RBP22.24■■□□□ 1.15
SMYD3-207ENST00000462422 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
SMYD3-207ENST00000462422 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
SMYD3-207ENST00000462422 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
SMYD3-207ENST00000462422 CHD1O14646 1710 aa22.2■■□□□ 1.14
SMYD3-207ENST00000462422 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
SMYD3-207ENST00000462422 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
SMYD3-207ENST00000462422 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
SMYD3-207ENST00000462422 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms