Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 FLJ16779-201ENST00000612722 7638 ntBASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 AC096887.2-201ENST00000623443 1957 ntBASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 AC006077.2-201ENST00000623591 457 ntBASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 WHAMMP2-203ENST00000563942 1603 ntBASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPTSSBQ8NFR3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.06□□□□□ -0.48
SPTSSBQ8NFR3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.05□□□□□ -0.48
SPTSSBQ8NFR3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SPTSSBQ8NFR3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms