RNA–Protein interactions for RNA: ENST00000515820.6

NKX6-1-202, Transcript of NK6 homeobox 1, humanhuman

TSL 3 BASIC

Gene NKX6-1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-202ENST00000515820 NISCHQ9Y2I1 1504 aa42.83■■■■■ 4.45
NKX6-1-202ENST00000515820 CCDC180Q9P1Z9 1646 aa37.16■■■■□ 3.54
NKX6-1-202ENST00000515820 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
NKX6-1-202ENST00000515820 ZCCHC6Q5VYS8 1495 aaKnown RBP36.31■■■■□ 3.4
NKX6-1-202ENST00000515820 DCAF8L2P0C7V8 631 aa35.99■■■■□ 3.35
NKX6-1-202ENST00000515820 ABCC9O60706 1549 aa35.96■■■■□ 3.35
NKX6-1-202ENST00000515820 SUPT5HO00267 1087 aaKnown RBP35.79■■■■□ 3.32
NKX6-1-202ENST00000515820 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
NKX6-1-202ENST00000515820 CHIC1Q5VXU3 224 aa35.08■■■■□ 3.21
NKX6-1-202ENST00000515820 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
NKX6-1-202ENST00000515820 NACADO15069 1562 aa34.74■■■■□ 3.15
NKX6-1-202ENST00000515820 SCRIBQ14160 1630 aa34.61■■■■□ 3.13
NKX6-1-202ENST00000515820 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
NKX6-1-202ENST00000515820 HRCP23327 699 aa34.45■■■■□ 3.11
NKX6-1-202ENST00000515820 PCGF6Q9BYE7 350 aa34.12■■■■□ 3.05
NKX6-1-202ENST00000515820 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
NKX6-1-202ENST00000515820 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.04
NKX6-1-202ENST00000515820 RSF1Q96T23 1441 aaPredicted RBP33.94■■■■□ 3.02
NKX6-1-202ENST00000515820 LOC105371045A0A1W2PR82 267 aa33.91■■■■□ 3.02
NKX6-1-202ENST00000515820 BICRAQ9NZM4 1560 aa33.7■■■□□ 2.99
NKX6-1-202ENST00000515820 TRIM26Q12899 539 aaPredicted RBP33.59■■■□□ 2.97
NKX6-1-202ENST00000515820 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
NKX6-1-202ENST00000515820 PPARGC1BQ86YN6 1023 aaKnown RBP33.47■■■□□ 2.95
NKX6-1-202ENST00000515820 TRIM41Q8WV44 630 aa33.44■■■□□ 2.94
NKX6-1-202ENST00000515820 MROH2BQ7Z745 1585 aa33.23■■■□□ 2.91
NKX6-1-202ENST00000515820 ZEB1P37275 1124 aaPredicted RBP33.06■■■□□ 2.88
NKX6-1-202ENST00000515820 WIZO95785 1651 aa33.04■■■□□ 2.88
NKX6-1-202ENST00000515820 FAM9AQ8IZU1 332 aaPredicted RBP33■■■□□ 2.87
NKX6-1-202ENST00000515820 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
NKX6-1-202ENST00000515820 SMARCA4P51532 1647 aa32.94■■■□□ 2.86
NKX6-1-202ENST00000515820 EIF4G1Q04637 1599 aaKnown RBP32.85■■■□□ 2.85
NKX6-1-202ENST00000515820 TOP2AP11388 1531 aaKnown RBP32.65■■■□□ 2.82
NKX6-1-202ENST00000515820 EHMT2Q96KQ7 1210 aa32.56■■■□□ 2.8
NKX6-1-202ENST00000515820 ATAD2BQ9ULI0 1458 aa32.51■■■□□ 2.79
NKX6-1-202ENST00000515820 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
NKX6-1-202ENST00000515820 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
NKX6-1-202ENST00000515820 PEG3Q9GZU2 1588 aa32.35■■■□□ 2.77
NKX6-1-202ENST00000515820 CC2D2AQ9P2K1 1620 aa32.35■■■□□ 2.77
NKX6-1-202ENST00000515820 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
NKX6-1-202ENST00000515820 BAZ1BQ9UIG0 1483 aaKnown RBP32.32■■■□□ 2.76
NKX6-1-202ENST00000515820 WRNQ14191 1432 aaPredicted RBP eCLIP32.3■■■□□ 2.76
NKX6-1-202ENST00000515820 EEA1Q15075 1411 aa32.21■■■□□ 2.75
NKX6-1-202ENST00000515820 TNIKQ9UKE5 1360 aa32.15■■■□□ 2.74
NKX6-1-202ENST00000515820 NCAPD3P42695 1498 aa32.14■■■□□ 2.74
NKX6-1-202ENST00000515820 CEP162Q5TB80 1403 aa32.14■■■□□ 2.74
NKX6-1-202ENST00000515820 DNAJC5BQ9UF47 199 aa32.13■■■□□ 2.73
NKX6-1-202ENST00000515820 SOGA1O94964 1423 aa32.1■■■□□ 2.73
NKX6-1-202ENST00000515820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.02■■■□□ 2.72
NKX6-1-202ENST00000515820 CCER1Q8TC90 406 aaPredicted RBP32.02■■■□□ 2.72
NKX6-1-202ENST00000515820 HMGXB3Q12766 1538 aa32.01■■■□□ 2.71
NKX6-1-202ENST00000515820 CSRNP3Q8WYN3 585 aa32■■■□□ 2.71
NKX6-1-202ENST00000515820 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
NKX6-1-202ENST00000515820 GOLGA3Q08378 1498 aa31.9■■■□□ 2.7
NKX6-1-202ENST00000515820 SCAF1Q9H7N4 1312 aaKnown RBP31.79■■■□□ 2.68
NKX6-1-202ENST00000515820 UBTFP17480 764 aaKnown RBP31.78■■■□□ 2.68
NKX6-1-202ENST00000515820 KIF21BO75037 1637 aa31.72■■■□□ 2.67
NKX6-1-202ENST00000515820 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
NKX6-1-202ENST00000515820 SYNJ1O43426 1573 aa31.69■■■□□ 2.66
NKX6-1-202ENST00000515820 PELP1Q8IZL8 1130 aaKnown RBP31.66■■■□□ 2.66
NKX6-1-202ENST00000515820 TTBK1Q5TCY1 1321 aaPredicted RBP31.62■■■□□ 2.65
NKX6-1-202ENST00000515820 DIEXFQ68CQ4 756 aaKnown RBP31.56■■■□□ 2.64
NKX6-1-202ENST00000515820 NESP48681 1621 aa31.51■■■□□ 2.63
NKX6-1-202ENST00000515820 ACIN1Q9UKV3 1341 aaKnown RBP31.5■■■□□ 2.63
NKX6-1-202ENST00000515820 CLIP1P30622 1438 aa31.49■■■□□ 2.63
NKX6-1-202ENST00000515820 VPS8Q8N3P4 1428 aa31.44■■■□□ 2.62
NKX6-1-202ENST00000515820 CFTRP13569 1480 aa31.42■■■□□ 2.62
NKX6-1-202ENST00000515820 CADPSQ9ULU8 1353 aa31.41■■■□□ 2.62
NKX6-1-202ENST00000515820 TOP2BQ02880 1626 aa31.36■■■□□ 2.61
NKX6-1-202ENST00000515820 NEUROD1Q13562 356 aa31.36■■■□□ 2.61
NKX6-1-202ENST00000515820 RAPGEF2Q9Y4G8 1499 aa31.35■■■□□ 2.61
NKX6-1-202ENST00000515820 ZNF316A6NFI3 1004 aaPredicted RBP31.33■■■□□ 2.61
NKX6-1-202ENST00000515820 CENPBP07199 599 aaPredicted RBP31.33■■■□□ 2.61
NKX6-1-202ENST00000515820 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
NKX6-1-202ENST00000515820 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
NKX6-1-202ENST00000515820 APLP2Q06481 763 aa31.19■■■□□ 2.58
NKX6-1-202ENST00000515820 HNRNPUL2Q1KMD3 747 aaKnown RBP31.16■■■□□ 2.58
NKX6-1-202ENST00000515820 FANCD2Q9BXW9 1451 aa31.13■■■□□ 2.57
NKX6-1-202ENST00000515820 PRXQ9BXM0 1461 aa31.12■■■□□ 2.57
NKX6-1-202ENST00000515820 PRDM2Q13029 1718 aa31.08■■■□□ 2.57
NKX6-1-202ENST00000515820 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
NKX6-1-202ENST00000515820 GTF3C3Q9Y5Q9 886 aa31.05■■■□□ 2.56
NKX6-1-202ENST00000515820 CUX1P39880 1505 aa31.02■■■□□ 2.56
NKX6-1-202ENST00000515820 ARAP1Q96P48 1450 aa30.98■■■□□ 2.55
NKX6-1-202ENST00000515820 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
NKX6-1-202ENST00000515820 CLSPNQ9HAW4 1339 aa30.95■■■□□ 2.55
NKX6-1-202ENST00000515820 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
NKX6-1-202ENST00000515820 KIF27Q86VH2 1401 aa30.89■■■□□ 2.54
NKX6-1-202ENST00000515820 RANGAP1P46060 587 aaPredicted RBP30.87■■■□□ 2.53
NKX6-1-202ENST00000515820 MIER1Q8N108 512 aa30.81■■■□□ 2.52
NKX6-1-202ENST00000515820 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
NKX6-1-202ENST00000515820 RRBP1Q9P2E9 1410 aaKnown RBP30.78■■■□□ 2.52
NKX6-1-202ENST00000515820 DHX57Q6P158 1386 aaKnown RBP30.78■■■□□ 2.52
NKX6-1-202ENST00000515820 ERCC6Q03468 1493 aa30.74■■■□□ 2.51
NKX6-1-202ENST00000515820 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
NKX6-1-202ENST00000515820 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
NKX6-1-202ENST00000515820 KANK4Q5T7N3 995 aaPredicted RBP30.72■■■□□ 2.51
NKX6-1-202ENST00000515820 CUX2O14529 1486 aa30.7■■■□□ 2.5
NKX6-1-202ENST00000515820 ARHGAP35Q9NRY4 1499 aa30.67■■■□□ 2.5
NKX6-1-202ENST00000515820 RAD54L2Q9Y4B4 1467 aa30.67■■■□□ 2.5
NKX6-1-202ENST00000515820 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms