RNA–Protein interactions for RNA: ENST00000276833.9

SLC39A4-201, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2 BASIC

Gene SLC39A4, Length 2,297 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-201ENST00000276833 NISCHQ9Y2I1 1504 aa37.67■■■■□ 3.62
SLC39A4-201ENST00000276833 HRCP23327 699 aa32.9■■■□□ 2.86
SLC39A4-201ENST00000276833 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
SLC39A4-201ENST00000276833 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.8
SLC39A4-201ENST00000276833 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
SLC39A4-201ENST00000276833 CHIC1Q5VXU3 224 aa32.2■■■□□ 2.74
SLC39A4-201ENST00000276833 PCGF6Q9BYE7 350 aa32.12■■■□□ 2.73
SLC39A4-201ENST00000276833 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
SLC39A4-201ENST00000276833 PPARGC1BQ86YN6 1023 aaKnown RBP31.98■■■□□ 2.71
SLC39A4-201ENST00000276833 DCAF1Q9Y4B6 1507 aa31.86■■■□□ 2.69
SLC39A4-201ENST00000276833 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
SLC39A4-201ENST00000276833 PELP1Q8IZL8 1130 aaKnown RBP31.53■■■□□ 2.64
SLC39A4-201ENST00000276833 TRIM26Q12899 539 aaPredicted RBP31.33■■■□□ 2.61
SLC39A4-201ENST00000276833 LOC105371045A0A1W2PR82 267 aa31.23■■■□□ 2.59
SLC39A4-201ENST00000276833 ZEB1P37275 1124 aaPredicted RBP31.1■■■□□ 2.57
SLC39A4-201ENST00000276833 SCAF1Q9H7N4 1312 aaKnown RBP30.92■■■□□ 2.54
SLC39A4-201ENST00000276833 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
SLC39A4-201ENST00000276833 ABCC9O60706 1549 aa30.47■■■□□ 2.47
SLC39A4-201ENST00000276833 ACIN1Q9UKV3 1341 aaKnown RBP30.29■■■□□ 2.44
SLC39A4-201ENST00000276833 MYT1Q01538 1121 aa30.28■■■□□ 2.44
SLC39A4-201ENST00000276833 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
SLC39A4-201ENST00000276833 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
SLC39A4-201ENST00000276833 NEUROD1Q13562 356 aa30.13■■■□□ 2.41
SLC39A4-201ENST00000276833 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
SLC39A4-201ENST00000276833 FAM9AQ8IZU1 332 aaPredicted RBP29.98■■■□□ 2.39
SLC39A4-201ENST00000276833 GTF3C3Q9Y5Q9 886 aa29.92■■■□□ 2.38
SLC39A4-201ENST00000276833 CENPBP07199 599 aaPredicted RBP29.9■■■□□ 2.38
SLC39A4-201ENST00000276833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.83■■■□□ 2.37
SLC39A4-201ENST00000276833 DIEXFQ68CQ4 756 aaKnown RBP29.81■■■□□ 2.36
SLC39A4-201ENST00000276833 CCER1Q8TC90 406 aaPredicted RBP29.8■■■□□ 2.36
SLC39A4-201ENST00000276833 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
SLC39A4-201ENST00000276833 EHMT2Q96KQ7 1210 aa29.65■■■□□ 2.34
SLC39A4-201ENST00000276833 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.31
SLC39A4-201ENST00000276833 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
SLC39A4-201ENST00000276833 ZNF316A6NFI3 1004 aaPredicted RBP29.36■■■□□ 2.29
SLC39A4-201ENST00000276833 MROH2BQ7Z745 1585 aa29.34■■■□□ 2.29
SLC39A4-201ENST00000276833 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
SLC39A4-201ENST00000276833 WIZO95785 1651 aa29.22■■■□□ 2.27
SLC39A4-201ENST00000276833 CEP162Q5TB80 1403 aa29.17■■■□□ 2.26
SLC39A4-201ENST00000276833 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
SLC39A4-201ENST00000276833 YTHDC1Q96MU7 727 aaKnown RBP29.08■■■□□ 2.25
SLC39A4-201ENST00000276833 TNIKQ9UKE5 1360 aa29.07■■■□□ 2.24
SLC39A4-201ENST00000276833 MIER1Q8N108 512 aa29.05■■■□□ 2.24
SLC39A4-201ENST00000276833 TTBK1Q5TCY1 1321 aaPredicted RBP28.98■■■□□ 2.23
SLC39A4-201ENST00000276833 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
SLC39A4-201ENST00000276833 NACADO15069 1562 aa28.94■■■□□ 2.22
SLC39A4-201ENST00000276833 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
SLC39A4-201ENST00000276833 EEA1Q15075 1411 aa28.87■■■□□ 2.21
SLC39A4-201ENST00000276833 SOGA1O94964 1423 aa28.83■■■□□ 2.21
SLC39A4-201ENST00000276833 CLSPNQ9HAW4 1339 aa28.81■■■□□ 2.2
SLC39A4-201ENST00000276833 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
SLC39A4-201ENST00000276833 CSRNP3Q8WYN3 585 aa28.73■■■□□ 2.19
SLC39A4-201ENST00000276833 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
SLC39A4-201ENST00000276833 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
SLC39A4-201ENST00000276833 RUSC2Q8N2Y8 1516 aa28.65■■■□□ 2.18
SLC39A4-201ENST00000276833 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
SLC39A4-201ENST00000276833 SUPT16HQ9Y5B9 1047 aaKnown RBP28.61■■■□□ 2.17
SLC39A4-201ENST00000276833 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
SLC39A4-201ENST00000276833 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
SLC39A4-201ENST00000276833 KIF21BO75037 1637 aa28.46■■■□□ 2.15
SLC39A4-201ENST00000276833 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
SLC39A4-201ENST00000276833 TSHZ2Q9NRE2 1034 aa28.44■■■□□ 2.14
SLC39A4-201ENST00000276833 VPS8Q8N3P4 1428 aa28.44■■■□□ 2.14
SLC39A4-201ENST00000276833 ANP32EQ9BTT0 268 aa28.43■■■□□ 2.14
SLC39A4-201ENST00000276833 CLIP1P30622 1438 aa28.4■■■□□ 2.14
SLC39A4-201ENST00000276833 DHX57Q6P158 1386 aaKnown RBP28.31■■■□□ 2.12
SLC39A4-201ENST00000276833 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
SLC39A4-201ENST00000276833 APLP2Q06481 763 aa28.19■■■□□ 2.1
SLC39A4-201ENST00000276833 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
SLC39A4-201ENST00000276833 BCL11AQ9H165 835 aa28.15■■■□□ 2.1
SLC39A4-201ENST00000276833 RAPGEF2Q9Y4G8 1499 aa28.09■■■□□ 2.09
SLC39A4-201ENST00000276833 CUX2O14529 1486 aa28.03■■■□□ 2.08
SLC39A4-201ENST00000276833 RRBP1Q9P2E9 1410 aaKnown RBP27.97■■■□□ 2.07
SLC39A4-201ENST00000276833 PEG3Q9GZU2 1588 aa27.93■■■□□ 2.06
SLC39A4-201ENST00000276833 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
SLC39A4-201ENST00000276833 KCNH8Q96L42 1107 aa27.89■■■□□ 2.05
SLC39A4-201ENST00000276833 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
SLC39A4-201ENST00000276833 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
SLC39A4-201ENST00000276833 KANK4Q5T7N3 995 aaPredicted RBP27.81■■■□□ 2.04
SLC39A4-201ENST00000276833 FKBP8Q14318 412 aa27.8■■■□□ 2.04
SLC39A4-201ENST00000276833 BCANQ96GW7 911 aa27.79■■■□□ 2.04
SLC39A4-201ENST00000276833 RBM19Q9Y4C8 960 aaKnown RBP27.77■■■□□ 2.04
SLC39A4-201ENST00000276833 PRXQ9BXM0 1461 aa27.75■■■□□ 2.03
SLC39A4-201ENST00000276833 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
SLC39A4-201ENST00000276833 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
SLC39A4-201ENST00000276833 RANGAP1P46060 587 aaPredicted RBP27.73■■■□□ 2.03
SLC39A4-201ENST00000276833 CCNB3Q8WWL7 1395 aa27.72■■■□□ 2.03
SLC39A4-201ENST00000276833 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
SLC39A4-201ENST00000276833 NEFLP07196 543 aa27.61■■■□□ 2.01
SLC39A4-201ENST00000276833 RAB3GAP2Q9H2M9 1393 aa27.61■■■□□ 2.01
SLC39A4-201ENST00000276833 PPP1R15AO75807 674 aaPredicted RBP27.58■■■□□ 2.01
SLC39A4-201ENST00000276833 WDR97A6NE52 1622 aa27.56■■■□□ 2
SLC39A4-201ENST00000276833 CCER2I3L3R5 266 aa27.56■■■□□ 2
SLC39A4-201ENST00000276833 DDX10Q13206 875 aaKnown RBP27.55■■■□□ 2
SLC39A4-201ENST00000276833 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
SLC39A4-201ENST00000276833 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
SLC39A4-201ENST00000276833 MSH5O43196 834 aa27.51■■□□□ 1.99
SLC39A4-201ENST00000276833 ARHGAP35Q9NRY4 1499 aa27.47■■□□□ 1.99
SLC39A4-201ENST00000276833 SETD5Q9C0A6 1442 aa27.46■■□□□ 1.99
SLC39A4-201ENST00000276833 FANCIQ9NVI1 1328 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms