RNA–Protein interactions for RNA: ENST00000377060.7

CNNM3-202, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 2 BASIC

Gene CNNM3, Length 3,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-202ENST00000377060 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
CNNM3-202ENST00000377060 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
CNNM3-202ENST00000377060 SUPT5HO00267 1087 aaKnown RBP32.65■■■□□ 2.82
CNNM3-202ENST00000377060 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
CNNM3-202ENST00000377060 PCGF6Q9BYE7 350 aa31.13■■■□□ 2.57
CNNM3-202ENST00000377060 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
CNNM3-202ENST00000377060 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
CNNM3-202ENST00000377060 LOC105371045A0A1W2PR82 267 aa30.82■■■□□ 2.52
CNNM3-202ENST00000377060 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
CNNM3-202ENST00000377060 ZCCHC6Q5VYS8 1495 aaKnown RBP30.75■■■□□ 2.51
CNNM3-202ENST00000377060 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
CNNM3-202ENST00000377060 HRCP23327 699 aa30.66■■■□□ 2.5
CNNM3-202ENST00000377060 FAM9AQ8IZU1 332 aaPredicted RBP30.43■■■□□ 2.46
CNNM3-202ENST00000377060 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.41
CNNM3-202ENST00000377060 TRIM41Q8WV44 630 aa29.94■■■□□ 2.38
CNNM3-202ENST00000377060 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
CNNM3-202ENST00000377060 TTBK1Q5TCY1 1321 aaPredicted RBP29.72■■■□□ 2.35
CNNM3-202ENST00000377060 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
CNNM3-202ENST00000377060 SCRIBQ14160 1630 aa29.47■■■□□ 2.31
CNNM3-202ENST00000377060 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
CNNM3-202ENST00000377060 ABCC9O60706 1549 aa29.28■■■□□ 2.28
CNNM3-202ENST00000377060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.19■■■□□ 2.26
CNNM3-202ENST00000377060 CCER1Q8TC90 406 aaPredicted RBP29.05■■■□□ 2.24
CNNM3-202ENST00000377060 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
CNNM3-202ENST00000377060 ZEB1P37275 1124 aaPredicted RBP29.02■■■□□ 2.24
CNNM3-202ENST00000377060 CECR2Q9BXF3 1484 aa29■■■□□ 2.23
CNNM3-202ENST00000377060 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
CNNM3-202ENST00000377060 PELP1Q8IZL8 1130 aaKnown RBP28.82■■■□□ 2.2
CNNM3-202ENST00000377060 SCAF1Q9H7N4 1312 aaKnown RBP28.78■■■□□ 2.2
CNNM3-202ENST00000377060 UBTFP17480 764 aaKnown RBP28.74■■■□□ 2.19
CNNM3-202ENST00000377060 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
CNNM3-202ENST00000377060 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
CNNM3-202ENST00000377060 YTHDC1Q96MU7 727 aaKnown RBP28.5■■■□□ 2.15
CNNM3-202ENST00000377060 WIZO95785 1651 aa28.5■■■□□ 2.15
CNNM3-202ENST00000377060 HNRNPUL2Q1KMD3 747 aaKnown RBP28.46■■■□□ 2.15
CNNM3-202ENST00000377060 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
CNNM3-202ENST00000377060 NEUROD1Q13562 356 aa28.38■■■□□ 2.13
CNNM3-202ENST00000377060 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
CNNM3-202ENST00000377060 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
CNNM3-202ENST00000377060 SOGA1O94964 1423 aa28.26■■■□□ 2.11
CNNM3-202ENST00000377060 GTF3C3Q9Y5Q9 886 aa28.23■■■□□ 2.11
CNNM3-202ENST00000377060 CSRNP3Q8WYN3 585 aa28.21■■■□□ 2.11
CNNM3-202ENST00000377060 ACIN1Q9UKV3 1341 aaKnown RBP28.18■■■□□ 2.1
CNNM3-202ENST00000377060 NACADO15069 1562 aa28.16■■■□□ 2.1
CNNM3-202ENST00000377060 CEP162Q5TB80 1403 aa28.12■■■□□ 2.09
CNNM3-202ENST00000377060 RUSC2Q8N2Y8 1516 aa28.1■■■□□ 2.09
CNNM3-202ENST00000377060 CENPBP07199 599 aaPredicted RBP28.08■■■□□ 2.09
CNNM3-202ENST00000377060 APLP2Q06481 763 aa28.08■■■□□ 2.09
CNNM3-202ENST00000377060 BAZ1AQ9NRL2 1556 aaPredicted RBP27.93■■■□□ 2.06
CNNM3-202ENST00000377060 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
CNNM3-202ENST00000377060 ITGAEP38570 1179 aa27.87■■■□□ 2.05
CNNM3-202ENST00000377060 MIER1Q8N108 512 aa27.82■■■□□ 2.04
CNNM3-202ENST00000377060 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
CNNM3-202ENST00000377060 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
CNNM3-202ENST00000377060 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.029e-6■■■■■ 50.1
CNNM3-202ENST00000377060 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
CNNM3-202ENST00000377060 SMARCA4P51532 1647 aa27.63■■■□□ 2.01
CNNM3-202ENST00000377060 CLIP1P30622 1438 aa27.6■■■□□ 2.01
CNNM3-202ENST00000377060 GOLGA3Q08378 1498 aa27.58■■■□□ 2.01
CNNM3-202ENST00000377060 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
CNNM3-202ENST00000377060 MYT1Q01538 1121 aa27.53■■■□□ 2
CNNM3-202ENST00000377060 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
CNNM3-202ENST00000377060 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
CNNM3-202ENST00000377060 RAPGEF2Q9Y4G8 1499 aa27.39■■□□□ 1.98
CNNM3-202ENST00000377060 EEA1Q15075 1411 aa27.39■■□□□ 1.98
CNNM3-202ENST00000377060 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
CNNM3-202ENST00000377060 P3H3Q8IVL6 736 aa27.32■■□□□ 1.96
CNNM3-202ENST00000377060 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
CNNM3-202ENST00000377060 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
CNNM3-202ENST00000377060 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
CNNM3-202ENST00000377060 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
CNNM3-202ENST00000377060 FAM50AQ14320 339 aaKnown RBP27.16■■□□□ 1.94
CNNM3-202ENST00000377060 BCANQ96GW7 911 aa27.15■■□□□ 1.94
CNNM3-202ENST00000377060 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
CNNM3-202ENST00000377060 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
CNNM3-202ENST00000377060 KCNH8Q96L42 1107 aa27.09■■□□□ 1.93
CNNM3-202ENST00000377060 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
CNNM3-202ENST00000377060 KIF21BO75037 1637 aa26.99■■□□□ 1.91
CNNM3-202ENST00000377060 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
CNNM3-202ENST00000377060 SIN3AQ96ST3 1273 aa26.97■■□□□ 1.91
CNNM3-202ENST00000377060 DDX10Q13206 875 aaKnown RBP26.96■■□□□ 1.91
CNNM3-202ENST00000377060 SUPT16HQ9Y5B9 1047 aaKnown RBP26.83■■□□□ 1.89
CNNM3-202ENST00000377060 ARAP1Q96P48 1450 aa26.83■■□□□ 1.88
CNNM3-202ENST00000377060 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
CNNM3-202ENST00000377060 TRIM52Q96A61 297 aa26.76■■□□□ 1.87
CNNM3-202ENST00000377060 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
CNNM3-202ENST00000377060 ARID3CA6NKF2 412 aa26.73■■□□□ 1.87
CNNM3-202ENST00000377060 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
CNNM3-202ENST00000377060 CNGB1Q14028 1251 aaPredicted RBP26.7■■□□□ 1.86
CNNM3-202ENST00000377060 FKBP8Q14318 412 aa26.67■■□□□ 1.86
CNNM3-202ENST00000377060 CUX2O14529 1486 aa26.65■■□□□ 1.86
CNNM3-202ENST00000377060 PRXQ9BXM0 1461 aa26.62■■□□□ 1.85
CNNM3-202ENST00000377060 BCL11AQ9H165 835 aa26.6■■□□□ 1.85
CNNM3-202ENST00000377060 CUX1P39880 1505 aa26.58■■□□□ 1.85
CNNM3-202ENST00000377060 TOP2BQ02880 1626 aa26.58■■□□□ 1.85
CNNM3-202ENST00000377060 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
CNNM3-202ENST00000377060 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
CNNM3-202ENST00000377060 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
CNNM3-202ENST00000377060 CARMIL1Q5VZK9 1371 aa26.54■■□□□ 1.84
CNNM3-202ENST00000377060 CHIC2Q9UKJ5 165 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms