RNA–Protein interactions for RNA: ENST00000370332.5

GFI1-202, Transcript of growth factor independent 1 transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFI1, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1-202ENST00000370332 NISCHQ9Y2I1 1504 aa40.7■■■■■ 4.11
GFI1-202ENST00000370332 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
GFI1-202ENST00000370332 SUPT5HO00267 1087 aaKnown RBP34.92■■■■□ 3.18
GFI1-202ENST00000370332 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
GFI1-202ENST00000370332 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
GFI1-202ENST00000370332 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
GFI1-202ENST00000370332 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
GFI1-202ENST00000370332 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
GFI1-202ENST00000370332 HRCP23327 699 aa33.73■■■□□ 2.99
GFI1-202ENST00000370332 PCGF6Q9BYE7 350 aa33.54■■■□□ 2.96
GFI1-202ENST00000370332 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
GFI1-202ENST00000370332 LOC105371045A0A1W2PR82 267 aa33.19■■■□□ 2.9
GFI1-202ENST00000370332 PPARGC1BQ86YN6 1023 aaKnown RBP33.17■■■□□ 2.9
GFI1-202ENST00000370332 TRIM26Q12899 539 aaPredicted RBP32.64■■■□□ 2.82
GFI1-202ENST00000370332 ABCC9O60706 1549 aa32.61■■■□□ 2.81
GFI1-202ENST00000370332 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
GFI1-202ENST00000370332 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
GFI1-202ENST00000370332 TRIM41Q8WV44 630 aa32.37■■■□□ 2.77
GFI1-202ENST00000370332 FAM9AQ8IZU1 332 aaPredicted RBP32.31■■■□□ 2.76
GFI1-202ENST00000370332 RB1CC1Q8TDY2 1594 aa32.22■■■□□ 2.75
GFI1-202ENST00000370332 EHMT2Q96KQ7 1210 aa32.17■■■□□ 2.74
GFI1-202ENST00000370332 ZEB1P37275 1124 aaPredicted RBP32.03■■■□□ 2.72
GFI1-202ENST00000370332 CECR2Q9BXF3 1484 aa31.88■■■□□ 2.69
GFI1-202ENST00000370332 MROH2BQ7Z745 1585 aa31.76■■■□□ 2.68
GFI1-202ENST00000370332 WIZO95785 1651 aa31.62■■■□□ 2.65
GFI1-202ENST00000370332 NACADO15069 1562 aa31.59■■■□□ 2.65
GFI1-202ENST00000370332 SCAF1Q9H7N4 1312 aaKnown RBP31.44■■■□□ 2.62
GFI1-202ENST00000370332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
GFI1-202ENST00000370332 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
GFI1-202ENST00000370332 CCER1Q8TC90 406 aaPredicted RBP31.3■■■□□ 2.6
GFI1-202ENST00000370332 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
GFI1-202ENST00000370332 TTBK1Q5TCY1 1321 aaPredicted RBP31.22■■■□□ 2.59
GFI1-202ENST00000370332 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
GFI1-202ENST00000370332 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
GFI1-202ENST00000370332 PELP1Q8IZL8 1130 aaKnown RBP31.07■■■□□ 2.56
GFI1-202ENST00000370332 TOP2AP11388 1531 aaKnown RBP31■■■□□ 2.55
GFI1-202ENST00000370332 CEP162Q5TB80 1403 aa30.97■■■□□ 2.55
GFI1-202ENST00000370332 SOGA1O94964 1423 aa30.96■■■□□ 2.55
GFI1-202ENST00000370332 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
GFI1-202ENST00000370332 ACIN1Q9UKV3 1341 aaKnown RBP30.93■■■□□ 2.54
GFI1-202ENST00000370332 NEUROD1Q13562 356 aa30.92■■■□□ 2.54
GFI1-202ENST00000370332 DIEXFQ68CQ4 756 aaKnown RBP30.91■■■□□ 2.54
GFI1-202ENST00000370332 SMARCA2P51531 1590 aa30.9■■■□□ 2.54
GFI1-202ENST00000370332 SMARCA4P51532 1647 aa30.9■■■□□ 2.54
GFI1-202ENST00000370332 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
GFI1-202ENST00000370332 TNIKQ9UKE5 1360 aa30.82■■■□□ 2.52
GFI1-202ENST00000370332 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
GFI1-202ENST00000370332 CSRNP3Q8WYN3 585 aa30.79■■■□□ 2.52
GFI1-202ENST00000370332 GTF3C3Q9Y5Q9 886 aa30.66■■■□□ 2.5
GFI1-202ENST00000370332 EEA1Q15075 1411 aa30.63■■■□□ 2.49
GFI1-202ENST00000370332 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
GFI1-202ENST00000370332 CENPBP07199 599 aaPredicted RBP30.63■■■□□ 2.49
GFI1-202ENST00000370332 GOLGA3Q08378 1498 aa30.56■■■□□ 2.48
GFI1-202ENST00000370332 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
GFI1-202ENST00000370332 ZNF316A6NFI3 1004 aaPredicted RBP30.52■■■□□ 2.48
GFI1-202ENST00000370332 HNRNPUL2Q1KMD3 747 aaKnown RBP30.47■■■□□ 2.47
GFI1-202ENST00000370332 YTHDC1Q96MU7 727 aaKnown RBP30.36■■■□□ 2.45
GFI1-202ENST00000370332 SYNJ1O43426 1573 aa30.32■■■□□ 2.44
GFI1-202ENST00000370332 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
GFI1-202ENST00000370332 CLIP1P30622 1438 aa30.3■■■□□ 2.44
GFI1-202ENST00000370332 RANGAP1P46060 587 aaPredicted RBP30.28■■■□□ 2.44
GFI1-202ENST00000370332 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
GFI1-202ENST00000370332 MIER1Q8N108 512 aa30.23■■■□□ 2.43
GFI1-202ENST00000370332 KIF21BO75037 1637 aa30.21■■■□□ 2.43
GFI1-202ENST00000370332 VPS8Q8N3P4 1428 aa30.17■■■□□ 2.42
GFI1-202ENST00000370332 APLP2Q06481 763 aa30.16■■■□□ 2.42
GFI1-202ENST00000370332 PEG3Q9GZU2 1588 aa30.16■■■□□ 2.42
GFI1-202ENST00000370332 RAPGEF2Q9Y4G8 1499 aa30.14■■■□□ 2.42
GFI1-202ENST00000370332 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
GFI1-202ENST00000370332 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
GFI1-202ENST00000370332 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
GFI1-202ENST00000370332 KANK4Q5T7N3 995 aaPredicted RBP29.78■■■□□ 2.36
GFI1-202ENST00000370332 DHX57Q6P158 1386 aaKnown RBP29.77■■■□□ 2.36
GFI1-202ENST00000370332 ARAP1Q96P48 1450 aa29.73■■■□□ 2.35
GFI1-202ENST00000370332 PRXQ9BXM0 1461 aa29.69■■■□□ 2.34
GFI1-202ENST00000370332 CLSPNQ9HAW4 1339 aa29.66■■■□□ 2.34
GFI1-202ENST00000370332 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
GFI1-202ENST00000370332 ERICH3Q5RHP9 1530 aa29.64■■■□□ 2.33
GFI1-202ENST00000370332 ITGAEP38570 1179 aa29.54■■■□□ 2.32
GFI1-202ENST00000370332 MYT1Q01538 1121 aa29.52■■■□□ 2.32
GFI1-202ENST00000370332 CUX1P39880 1505 aa29.51■■■□□ 2.31
GFI1-202ENST00000370332 RRBP1Q9P2E9 1410 aaKnown RBP29.5■■■□□ 2.31
GFI1-202ENST00000370332 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
GFI1-202ENST00000370332 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
GFI1-202ENST00000370332 ARHGAP35Q9NRY4 1499 aa29.4■■■□□ 2.3
GFI1-202ENST00000370332 SUPT16HQ9Y5B9 1047 aaKnown RBP29.38■■■□□ 2.29
GFI1-202ENST00000370332 CUX2O14529 1486 aa29.33■■■□□ 2.29
GFI1-202ENST00000370332 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
GFI1-202ENST00000370332 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
GFI1-202ENST00000370332 RAB3GAP2Q9H2M9 1393 aa29.27■■■□□ 2.28
GFI1-202ENST00000370332 KCNH8Q96L42 1107 aa29.26■■■□□ 2.27
GFI1-202ENST00000370332 CFTRP13569 1480 aa29.23■■■□□ 2.27
GFI1-202ENST00000370332 MAPKBP1O60336 1514 aa29.17■■■□□ 2.26
GFI1-202ENST00000370332 IGF1RP08069 1367 aa29.16■■■□□ 2.26
GFI1-202ENST00000370332 SIN3AQ96ST3 1273 aa29.11■■■□□ 2.25
GFI1-202ENST00000370332 TIAM1Q13009 1591 aa29.1■■■□□ 2.25
GFI1-202ENST00000370332 FAM50AQ14320 339 aaKnown RBP29.09■■■□□ 2.25
GFI1-202ENST00000370332 SETD5Q9C0A6 1442 aa29.08■■■□□ 2.25
GFI1-202ENST00000370332 PHLDB1Q86UU1 1377 aa29.07■■■□□ 2.24
GFI1-202ENST00000370332 P3H3Q8IVL6 736 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms