RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
CACNB3-205ENST00000547392 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
CACNB3-205ENST00000547392 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
CACNB3-205ENST00000547392 SHROOM4Q9ULL8 1493 aa38.13■■■■□ 3.69
CACNB3-205ENST00000547392 DCAF1Q9Y4B6 1507 aa37.45■■■■□ 3.59
CACNB3-205ENST00000547392 SUPT5HO00267 1087 aaKnown RBP37.38■■■■□ 3.57
CACNB3-205ENST00000547392 DCAF8L2P0C7V8 631 aa37.09■■■■□ 3.53
CACNB3-205ENST00000547392 CHIC1Q5VXU3 224 aa36.54■■■■□ 3.44
CACNB3-205ENST00000547392 MYO15BQ96JP2 1530 aa36.45■■■■□ 3.43
CACNB3-205ENST00000547392 ABCC9O60706 1549 aa36.38■■■■□ 3.41
CACNB3-205ENST00000547392 SCRIBQ14160 1630 aa36■■■■□ 3.35
CACNB3-205ENST00000547392 NACADO15069 1562 aa35.83■■■■□ 3.33
CACNB3-205ENST00000547392 RSF1Q96T23 1441 aaPredicted RBP35.79■■■■□ 3.32
CACNB3-205ENST00000547392 RB1CC1Q8TDY2 1594 aa35.48■■■■□ 3.27
CACNB3-205ENST00000547392 HRCP23327 699 aa35.28■■■■□ 3.24
CACNB3-205ENST00000547392 LOC105371045A0A1W2PR82 267 aa35.24■■■■□ 3.23
CACNB3-205ENST00000547392 CECR2Q9BXF3 1484 aa35.21■■■■□ 3.23
CACNB3-205ENST00000547392 MROH2BQ7Z745 1585 aa35.16■■■■□ 3.22
CACNB3-205ENST00000547392 PCGF6Q9BYE7 350 aa35.11■■■■□ 3.21
CACNB3-205ENST00000547392 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
CACNB3-205ENST00000547392 WIZO95785 1651 aa34.95■■■■□ 3.19
CACNB3-205ENST00000547392 BAZ1AQ9NRL2 1556 aaPredicted RBP34.89■■■■□ 3.18
CACNB3-205ENST00000547392 UNC13AQ9UPW8 1703 aa34.86■■■■□ 3.17
CACNB3-205ENST00000547392 TRIM26Q12899 539 aaPredicted RBP34.71■■■■□ 3.15
CACNB3-205ENST00000547392 EIF4G1Q04637 1599 aaKnown RBP34.63■■■■□ 3.13
CACNB3-205ENST00000547392 SMARCA4P51532 1647 aa34.57■■■■□ 3.12
CACNB3-205ENST00000547392 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
CACNB3-205ENST00000547392 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
CACNB3-205ENST00000547392 BICRAQ9NZM4 1560 aa34.48■■■■□ 3.11
CACNB3-205ENST00000547392 FAM9AQ8IZU1 332 aaPredicted RBP34.46■■■■□ 3.11
CACNB3-205ENST00000547392 SMARCA2P51531 1590 aa34.31■■■■□ 3.08
CACNB3-205ENST00000547392 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
CACNB3-205ENST00000547392 PPARGC1BQ86YN6 1023 aaKnown RBP34.26■■■■□ 3.08
CACNB3-205ENST00000547392 PEG3Q9GZU2 1588 aa34.06■■■■□ 3.04
CACNB3-205ENST00000547392 ABCC8Q09428 1581 aa34.04■■■■□ 3.04
CACNB3-205ENST00000547392 ZEB1P37275 1124 aaPredicted RBP34.03■■■■□ 3.04
CACNB3-205ENST00000547392 EHMT2Q96KQ7 1210 aa33.95■■■■□ 3.03
CACNB3-205ENST00000547392 EEA1Q15075 1411 aa33.83■■■■□ 3.01
CACNB3-205ENST00000547392 SOGA1O94964 1423 aa33.72■■■□□ 2.99
CACNB3-205ENST00000547392 WRNQ14191 1432 aaPredicted RBP eCLIP33.72■■■□□ 2.99
CACNB3-205ENST00000547392 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
CACNB3-205ENST00000547392 TNIKQ9UKE5 1360 aa33.66■■■□□ 2.98
CACNB3-205ENST00000547392 CEP162Q5TB80 1403 aa33.59■■■□□ 2.97
CACNB3-205ENST00000547392 CSRNP3Q8WYN3 585 aa33.59■■■□□ 2.97
CACNB3-205ENST00000547392 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
CACNB3-205ENST00000547392 BAZ1BQ9UIG0 1483 aaKnown RBP33.52■■■□□ 2.96
CACNB3-205ENST00000547392 GOLGA3Q08378 1498 aa33.46■■■□□ 2.95
CACNB3-205ENST00000547392 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
CACNB3-205ENST00000547392 KIF21BO75037 1637 aa33.35■■■□□ 2.93
CACNB3-205ENST00000547392 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
CACNB3-205ENST00000547392 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
CACNB3-205ENST00000547392 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
CACNB3-205ENST00000547392 HMGXB3Q12766 1538 aa33.14■■■□□ 2.9
CACNB3-205ENST00000547392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.11■■■□□ 2.89
CACNB3-205ENST00000547392 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
CACNB3-205ENST00000547392 CCER1Q8TC90 406 aaPredicted RBP33.09■■■□□ 2.89
CACNB3-205ENST00000547392 BIVM-ERCC5R4GMW8 1640 aa33.09■■■□□ 2.89
CACNB3-205ENST00000547392 CLIP1P30622 1438 aa33■■■□□ 2.87
CACNB3-205ENST00000547392 RAPGEF2Q9Y4G8 1499 aa32.94■■■□□ 2.86
CACNB3-205ENST00000547392 VPS8Q8N3P4 1428 aa32.91■■■□□ 2.86
CACNB3-205ENST00000547392 TTBK1Q5TCY1 1321 aaPredicted RBP32.89■■■□□ 2.86
CACNB3-205ENST00000547392 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
CACNB3-205ENST00000547392 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
CACNB3-205ENST00000547392 PRXQ9BXM0 1461 aa32.79■■■□□ 2.84
CACNB3-205ENST00000547392 CFTRP13569 1480 aa32.78■■■□□ 2.84
CACNB3-205ENST00000547392 CUX1P39880 1505 aa32.77■■■□□ 2.84
CACNB3-205ENST00000547392 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
CACNB3-205ENST00000547392 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
CACNB3-205ENST00000547392 APLP2Q06481 763 aa32.59■■■□□ 2.81
CACNB3-205ENST00000547392 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
CACNB3-205ENST00000547392 DIEXFQ68CQ4 756 aaKnown RBP32.43■■■□□ 2.78
CACNB3-205ENST00000547392 HNRNPUL2Q1KMD3 747 aaKnown RBP32.42■■■□□ 2.78
CACNB3-205ENST00000547392 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
CACNB3-205ENST00000547392 RANGAP1P46060 587 aaPredicted RBP32.36■■■□□ 2.77
CACNB3-205ENST00000547392 DNAJC5BQ9UF47 199 aa32.35■■■□□ 2.77
CACNB3-205ENST00000547392 ZNF316A6NFI3 1004 aaPredicted RBP32.31■■■□□ 2.76
CACNB3-205ENST00000547392 SCAF1Q9H7N4 1312 aaKnown RBP32.3■■■□□ 2.76
CACNB3-205ENST00000547392 ARHGAP35Q9NRY4 1499 aa32.25■■■□□ 2.75
CACNB3-205ENST00000547392 CUX2O14529 1486 aa32.23■■■□□ 2.75
CACNB3-205ENST00000547392 IGF1RP08069 1367 aa32.23■■■□□ 2.75
CACNB3-205ENST00000547392 RRBP1Q9P2E9 1410 aaKnown RBP32.18■■■□□ 2.74
CACNB3-205ENST00000547392 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
CACNB3-205ENST00000547392 KANK4Q5T7N3 995 aaPredicted RBP32.16■■■□□ 2.74
CACNB3-205ENST00000547392 CLSPNQ9HAW4 1339 aa32.16■■■□□ 2.74
CACNB3-205ENST00000547392 ACIN1Q9UKV3 1341 aaKnown RBP32.15■■■□□ 2.74
CACNB3-205ENST00000547392 NESP48681 1621 aa32.14■■■□□ 2.74
CACNB3-205ENST00000547392 CARMIL1Q5VZK9 1371 aa32.07■■■□□ 2.72
CACNB3-205ENST00000547392 MAP3K1Q13233 1512 aa32.07■■■□□ 2.72
CACNB3-205ENST00000547392 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
CACNB3-205ENST00000547392 CENPBP07199 599 aaPredicted RBP32.02■■■□□ 2.72
CACNB3-205ENST00000547392 DHX57Q6P158 1386 aaKnown RBP32.02■■■□□ 2.72
CACNB3-205ENST00000547392 NEUROD1Q13562 356 aa32.01■■■□□ 2.71
CACNB3-205ENST00000547392 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
CACNB3-205ENST00000547392 CCNB3Q8WWL7 1395 aa31.95■■■□□ 2.71
CACNB3-205ENST00000547392 TIAM1Q13009 1591 aa31.94■■■□□ 2.7
CACNB3-205ENST00000547392 ABCA10Q8WWZ4 1543 aa31.89■■■□□ 2.7
CACNB3-205ENST00000547392 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
CACNB3-205ENST00000547392 FHAD1B1AJZ9 1412 aa31.82■■■□□ 2.69
CACNB3-205ENST00000547392 POLA1P09884 1462 aaPredicted RBP31.8■■■□□ 2.68
CACNB3-205ENST00000547392 LRRC9Q6ZRR7 1453 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms