RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
SIM2-201ENST00000290399 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
SIM2-201ENST00000290399 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
SIM2-201ENST00000290399 SHROOM4Q9ULL8 1493 aa30.96■■■□□ 2.55
SIM2-201ENST00000290399 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
SIM2-201ENST00000290399 FAM9AQ8IZU1 332 aaPredicted RBP29.19■■■□□ 2.26
SIM2-201ENST00000290399 PCGF6Q9BYE7 350 aa28.96■■■□□ 2.23
SIM2-201ENST00000290399 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
SIM2-201ENST00000290399 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
SIM2-201ENST00000290399 APLP2Q06481 763 aa28.55■■■□□ 2.16
SIM2-201ENST00000290399 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
SIM2-201ENST00000290399 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
SIM2-201ENST00000290399 LOC105371045A0A1W2PR82 267 aa28.17■■■□□ 2.1
SIM2-201ENST00000290399 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
SIM2-201ENST00000290399 CCER1Q8TC90 406 aaPredicted RBP28.02■■■□□ 2.08
SIM2-201ENST00000290399 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
SIM2-201ENST00000290399 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
SIM2-201ENST00000290399 ABCC9O60706 1549 aa27.9■■■□□ 2.06
SIM2-201ENST00000290399 TRIM26Q12899 539 aaPredicted RBP27.89■■■□□ 2.06
SIM2-201ENST00000290399 HRCP23327 699 aa27.77■■■□□ 2.04
SIM2-201ENST00000290399 ATP1B4Q9UN42 357 aaPredicted RBP27.72■■■□□ 2.03
SIM2-201ENST00000290399 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
SIM2-201ENST00000290399 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
SIM2-201ENST00000290399 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
SIM2-201ENST00000290399 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
SIM2-201ENST00000290399 HNRNPUL2Q1KMD3 747 aaKnown RBP27.21■■□□□ 1.95
SIM2-201ENST00000290399 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
SIM2-201ENST00000290399 ITGAEP38570 1179 aa27.15■■□□□ 1.94
SIM2-201ENST00000290399 YTHDC1Q96MU7 727 aaKnown RBP27.13■■□□□ 1.93
SIM2-201ENST00000290399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.11■■□□□ 1.93
SIM2-201ENST00000290399 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
SIM2-201ENST00000290399 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
SIM2-201ENST00000290399 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.85
SIM2-201ENST00000290399 MYO15BQ96JP2 1530 aa26.56■■□□□ 1.84
SIM2-201ENST00000290399 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
SIM2-201ENST00000290399 NEFLP07196 543 aa26.55■■□□□ 1.84
SIM2-201ENST00000290399 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
SIM2-201ENST00000290399 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
SIM2-201ENST00000290399 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
SIM2-201ENST00000290399 P3H3Q8IVL6 736 aa26.31■■□□□ 1.8
SIM2-201ENST00000290399 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
SIM2-201ENST00000290399 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
SIM2-201ENST00000290399 ERICH6Q7L0X2 663 aa26.24■■□□□ 1.79
SIM2-201ENST00000290399 NACADO15069 1562 aa26.23■■□□□ 1.79
SIM2-201ENST00000290399 CNGB1Q14028 1251 aaPredicted RBP26.22■■□□□ 1.79
SIM2-201ENST00000290399 MYT1LQ9UL68 1186 aa26.2■■□□□ 1.78
SIM2-201ENST00000290399 ZNF316A6NFI3 1004 aaPredicted RBP26.18■■□□□ 1.78
SIM2-201ENST00000290399 TRIM52Q96A61 297 aa26.16■■□□□ 1.78
SIM2-201ENST00000290399 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
SIM2-201ENST00000290399 FBLN2P98095 1184 aa26.06■■□□□ 1.76
SIM2-201ENST00000290399 ARID3CA6NKF2 412 aa26.02■■□□□ 1.76
SIM2-201ENST00000290399 GTF3C3Q9Y5Q9 886 aa25.99■■□□□ 1.75
SIM2-201ENST00000290399 CLIP1P30622 1438 aa25.88■■□□□ 1.73
SIM2-201ENST00000290399 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
SIM2-201ENST00000290399 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
SIM2-201ENST00000290399 CEP162Q5TB80 1403 aa25.86■■□□□ 1.73
SIM2-201ENST00000290399 EEA1Q15075 1411 aa25.83■■□□□ 1.73
SIM2-201ENST00000290399 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
SIM2-201ENST00000290399 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
SIM2-201ENST00000290399 ANP32CO43423 234 aa25.78■■□□□ 1.72
SIM2-201ENST00000290399 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
SIM2-201ENST00000290399 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
SIM2-201ENST00000290399 GOLGA3Q08378 1498 aa25.75■■□□□ 1.71
SIM2-201ENST00000290399 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
SIM2-201ENST00000290399 ZNF777Q9ULD5 760 aaPredicted RBP25.66■■□□□ 1.7
SIM2-201ENST00000290399 BCANQ96GW7 911 aa25.65■■□□□ 1.7
SIM2-201ENST00000290399 CDK11AQ9UQ88 783 aaPredicted RBP25.62■■□□□ 1.69
SIM2-201ENST00000290399 SOGA1O94964 1423 aa25.59■■□□□ 1.69
SIM2-201ENST00000290399 MYT1Q01538 1121 aa25.56■■□□□ 1.68
SIM2-201ENST00000290399 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
SIM2-201ENST00000290399 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
SIM2-201ENST00000290399 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
SIM2-201ENST00000290399 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
SIM2-201ENST00000290399 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
SIM2-201ENST00000290399 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
SIM2-201ENST00000290399 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
SIM2-201ENST00000290399 MTUS2Q5JR59 1369 aa25.48■■□□□ 1.67
SIM2-201ENST00000290399 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
SIM2-201ENST00000290399 MIER1Q8N108 512 aa25.4■■□□□ 1.66
SIM2-201ENST00000290399 WIZO95785 1651 aa25.38■■□□□ 1.65
SIM2-201ENST00000290399 DAXXQ9UER7 740 aaPredicted RBP25.32■■□□□ 1.64
SIM2-201ENST00000290399 HIRIP3Q9BW71 556 aaPredicted RBP25.3■■□□□ 1.64
SIM2-201ENST00000290399 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
SIM2-201ENST00000290399 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
SIM2-201ENST00000290399 RRP7BPQ9NSQ0 103 aa25.24■■□□□ 1.63
SIM2-201ENST00000290399 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
SIM2-201ENST00000290399 HNRNPUQ00839 825 aaKnown RBP eCLIP25.17■■□□□ 1.62
SIM2-201ENST00000290399 CUX2O14529 1486 aa25.16■■□□□ 1.62
SIM2-201ENST00000290399 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
SIM2-201ENST00000290399 FKBP8Q14318 412 aa25.15■■□□□ 1.62
SIM2-201ENST00000290399 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
SIM2-201ENST00000290399 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
SIM2-201ENST00000290399 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
SIM2-201ENST00000290399 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
SIM2-201ENST00000290399 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
SIM2-201ENST00000290399 FAM9BQ8IZU0 186 aa25.1■■□□□ 1.61
SIM2-201ENST00000290399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.08■■□□□ 1.6
SIM2-201ENST00000290399 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
SIM2-201ENST00000290399 CCNB3Q8WWL7 1395 aa25.06■■□□□ 1.6
SIM2-201ENST00000290399 SIN3AQ96ST3 1273 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms