RNA–Protein interactions for RNA: ENST00000383829.6

BRPF1-201, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-201ENST00000383829 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
BRPF1-201ENST00000383829 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
BRPF1-201ENST00000383829 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
BRPF1-201ENST00000383829 SHROOM4Q9ULL8 1493 aa28.55■■■□□ 2.16
BRPF1-201ENST00000383829 EHMT2Q96KQ7 1210 aa27.32■■□□□ 1.96
BRPF1-201ENST00000383829 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
BRPF1-201ENST00000383829 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
BRPF1-201ENST00000383829 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
BRPF1-201ENST00000383829 APLP2Q06481 763 aa26.82■■□□□ 1.88
BRPF1-201ENST00000383829 ZEB1P37275 1124 aaPredicted RBP26.63■■□□□ 1.85
BRPF1-201ENST00000383829 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.82
BRPF1-201ENST00000383829 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
BRPF1-201ENST00000383829 PELP1Q8IZL8 1130 aaKnown RBP26.39■■□□□ 1.81
BRPF1-201ENST00000383829 CCER1Q8TC90 406 aaPredicted RBP26.3■■□□□ 1.8
BRPF1-201ENST00000383829 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
BRPF1-201ENST00000383829 TRIM26Q12899 539 aaPredicted RBP26.21■■□□□ 1.79
BRPF1-201ENST00000383829 HRCP23327 699 aa26.16■■□□□ 1.78
BRPF1-201ENST00000383829 CENPBP07199 599 aaPredicted RBP26.12■■□□□ 1.77
BRPF1-201ENST00000383829 RANGAP1P46060 587 aaPredicted RBP26.1■■□□□ 1.77
BRPF1-201ENST00000383829 LOC105371045A0A1W2PR82 267 aa26.06■■□□□ 1.76
BRPF1-201ENST00000383829 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.73
BRPF1-201ENST00000383829 ATP1B4Q9UN42 357 aaPredicted RBP25.73■■□□□ 1.71
BRPF1-201ENST00000383829 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
BRPF1-201ENST00000383829 ABCC9O60706 1549 aa25.49■■□□□ 1.67
BRPF1-201ENST00000383829 YTHDC1Q96MU7 727 aaKnown RBP25.46■■□□□ 1.67
BRPF1-201ENST00000383829 HNRNPUL2Q1KMD3 747 aaKnown RBP25.32■■□□□ 1.64
BRPF1-201ENST00000383829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.26■■□□□ 1.63
BRPF1-201ENST00000383829 NEFLP07196 543 aa25.25■■□□□ 1.63
BRPF1-201ENST00000383829 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
BRPF1-201ENST00000383829 ITGAEP38570 1179 aa25.2■■□□□ 1.62
BRPF1-201ENST00000383829 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.61
BRPF1-201ENST00000383829 ERICH6Q7L0X2 663 aa25.11■■□□□ 1.61
BRPF1-201ENST00000383829 DIEXFQ68CQ4 756 aaKnown RBP25.07■■□□□ 1.6
BRPF1-201ENST00000383829 MYT1Q01538 1121 aa25■■□□□ 1.59
BRPF1-201ENST00000383829 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
BRPF1-201ENST00000383829 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
BRPF1-201ENST00000383829 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
BRPF1-201ENST00000383829 FAM50AQ14320 339 aaKnown RBP24.7■■□□□ 1.55
BRPF1-201ENST00000383829 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.53
BRPF1-201ENST00000383829 POLR3GLQ9BT43 218 aa24.58■■□□□ 1.52
BRPF1-201ENST00000383829 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.52
BRPF1-201ENST00000383829 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
BRPF1-201ENST00000383829 GTF3C3Q9Y5Q9 886 aa24.51■■□□□ 1.51
BRPF1-201ENST00000383829 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
BRPF1-201ENST00000383829 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
BRPF1-201ENST00000383829 ACIN1Q9UKV3 1341 aaKnown RBP24.4■■□□□ 1.5
BRPF1-201ENST00000383829 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
BRPF1-201ENST00000383829 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
BRPF1-201ENST00000383829 ANP32CO43423 234 aa24.29■■□□□ 1.48
BRPF1-201ENST00000383829 NACADO15069 1562 aa24.26■■□□□ 1.47
BRPF1-201ENST00000383829 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
BRPF1-201ENST00000383829 P3H3Q8IVL6 736 aa24.26■■□□□ 1.47
BRPF1-201ENST00000383829 EEA1Q15075 1411 aa24.2■■□□□ 1.46
BRPF1-201ENST00000383829 DAXXQ9UER7 740 aaPredicted RBP24.14■■□□□ 1.46
BRPF1-201ENST00000383829 CLIP1P30622 1438 aa24.1■■□□□ 1.45
BRPF1-201ENST00000383829 BCANQ96GW7 911 aa24.07■■□□□ 1.44
BRPF1-201ENST00000383829 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
BRPF1-201ENST00000383829 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
BRPF1-201ENST00000383829 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
BRPF1-201ENST00000383829 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
BRPF1-201ENST00000383829 FBLN2P98095 1184 aa23.98■■□□□ 1.43
BRPF1-201ENST00000383829 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
BRPF1-201ENST00000383829 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
BRPF1-201ENST00000383829 BAZ1AQ9NRL2 1556 aaPredicted RBP23.96■■□□□ 1.43
BRPF1-201ENST00000383829 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
BRPF1-201ENST00000383829 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
BRPF1-201ENST00000383829 TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
BRPF1-201ENST00000383829 ARID3CA6NKF2 412 aa23.91■■□□□ 1.42
BRPF1-201ENST00000383829 SLC4A1APQ9BWU0 796 aaKnown RBP23.86■■□□□ 1.41
BRPF1-201ENST00000383829 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
BRPF1-201ENST00000383829 RTL5Q5HYW3 569 aaPredicted RBP23.82■■□□□ 1.4
BRPF1-201ENST00000383829 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
BRPF1-201ENST00000383829 DDX10Q13206 875 aaKnown RBP23.8■■□□□ 1.4
BRPF1-201ENST00000383829 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
BRPF1-201ENST00000383829 ZNF777Q9ULD5 760 aaPredicted RBP23.77■■□□□ 1.4
BRPF1-201ENST00000383829 MIER1Q8N108 512 aa23.76■■□□□ 1.39
BRPF1-201ENST00000383829 MTUS2Q5JR59 1369 aa23.72■■□□□ 1.39
BRPF1-201ENST00000383829 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
BRPF1-201ENST00000383829 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
BRPF1-201ENST00000383829 FKBP8Q14318 412 aa23.67■■□□□ 1.38
BRPF1-201ENST00000383829 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
BRPF1-201ENST00000383829 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
BRPF1-201ENST00000383829 SOGA1O94964 1423 aa23.61■■□□□ 1.37
BRPF1-201ENST00000383829 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
BRPF1-201ENST00000383829 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
BRPF1-201ENST00000383829 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
BRPF1-201ENST00000383829 ANP32AP39687 249 aaKnown RBP23.42■■□□□ 1.34
BRPF1-201ENST00000383829 VPS8Q8N3P4 1428 aa23.41■■□□□ 1.34
BRPF1-201ENST00000383829 TSPY4P0CV99 314 aa23.41■■□□□ 1.34
BRPF1-201ENST00000383829 TSPY10P0CW01 314 aa23.41■■□□□ 1.34
BRPF1-201ENST00000383829 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
BRPF1-201ENST00000383829 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
BRPF1-201ENST00000383829 RRP7BPQ9NSQ0 103 aa23.4■■□□□ 1.34
BRPF1-201ENST00000383829 CANXP27824 592 aaKnown RBP23.38■■□□□ 1.33
BRPF1-201ENST00000383829 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
BRPF1-201ENST00000383829 CCNB3Q8WWL7 1395 aa23.37■■□□□ 1.33
BRPF1-201ENST00000383829 WIZO95785 1651 aa23.36■■□□□ 1.33
BRPF1-201ENST00000383829 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
BRPF1-201ENST00000383829 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
BRPF1-201ENST00000383829 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms