RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 NISCHQ9Y2I1 1504 aa36.33■■■■□ 3.41
FOXP4-202ENST00000373057 SHROOM4Q9ULL8 1493 aa32.83■■■□□ 2.85
FOXP4-202ENST00000373057 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
FOXP4-202ENST00000373057 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
FOXP4-202ENST00000373057 PCGF6Q9BYE7 350 aa31.32■■■□□ 2.61
FOXP4-202ENST00000373057 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
FOXP4-202ENST00000373057 HRCP23327 699 aa31.06■■■□□ 2.56
FOXP4-202ENST00000373057 PPARGC1BQ86YN6 1023 aaKnown RBP31.05■■■□□ 2.56
FOXP4-202ENST00000373057 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
FOXP4-202ENST00000373057 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
FOXP4-202ENST00000373057 ZCCHC6Q5VYS8 1495 aaKnown RBP30.67■■■□□ 2.5
FOXP4-202ENST00000373057 EHMT2Q96KQ7 1210 aa30.59■■■□□ 2.49
FOXP4-202ENST00000373057 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
FOXP4-202ENST00000373057 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
FOXP4-202ENST00000373057 TRIM26Q12899 539 aaPredicted RBP29.97■■■□□ 2.39
FOXP4-202ENST00000373057 TRIM41Q8WV44 630 aa29.83■■■□□ 2.37
FOXP4-202ENST00000373057 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
FOXP4-202ENST00000373057 TTBK1Q5TCY1 1321 aaPredicted RBP29.62■■■□□ 2.33
FOXP4-202ENST00000373057 ZEB1P37275 1124 aaPredicted RBP29.32■■■□□ 2.28
FOXP4-202ENST00000373057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.28■■■□□ 2.28
FOXP4-202ENST00000373057 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
FOXP4-202ENST00000373057 SCAF1Q9H7N4 1312 aaKnown RBP29.19■■■□□ 2.26
FOXP4-202ENST00000373057 CCER1Q8TC90 406 aaPredicted RBP29.16■■■□□ 2.26
FOXP4-202ENST00000373057 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
FOXP4-202ENST00000373057 ABCC9O60706 1549 aa28.94■■■□□ 2.22
FOXP4-202ENST00000373057 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
FOXP4-202ENST00000373057 PELP1Q8IZL8 1130 aaKnown RBP28.9■■■□□ 2.22
FOXP4-202ENST00000373057 CECR2Q9BXF3 1484 aa28.79■■■□□ 2.2
FOXP4-202ENST00000373057 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
FOXP4-202ENST00000373057 YTHDC1Q96MU7 727 aaKnown RBP28.71■■■□□ 2.19
FOXP4-202ENST00000373057 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
FOXP4-202ENST00000373057 GTF3C3Q9Y5Q9 886 aa28.62■■■□□ 2.17
FOXP4-202ENST00000373057 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
FOXP4-202ENST00000373057 ACIN1Q9UKV3 1341 aaKnown RBP28.59■■■□□ 2.17
FOXP4-202ENST00000373057 UBTFP17480 764 aaKnown RBP28.59■■■□□ 2.17
FOXP4-202ENST00000373057 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
FOXP4-202ENST00000373057 CENPBP07199 599 aaPredicted RBP28.45■■■□□ 2.15
FOXP4-202ENST00000373057 HNRNPUL2Q1KMD3 747 aaKnown RBP28.42■■■□□ 2.14
FOXP4-202ENST00000373057 WIZO95785 1651 aa28.37■■■□□ 2.13
FOXP4-202ENST00000373057 ABCC8Q09428 1581 aa28.17■■■□□ 2.1
FOXP4-202ENST00000373057 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
FOXP4-202ENST00000373057 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
FOXP4-202ENST00000373057 SOGA1O94964 1423 aa28.12■■■□□ 2.09
FOXP4-202ENST00000373057 ZNF316A6NFI3 1004 aaPredicted RBP28.1■■■□□ 2.09
FOXP4-202ENST00000373057 CEP162Q5TB80 1403 aa28.09■■■□□ 2.09
FOXP4-202ENST00000373057 MYT1Q01538 1121 aa28.08■■■□□ 2.09
FOXP4-202ENST00000373057 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
FOXP4-202ENST00000373057 NACADO15069 1562 aa28.03■■■□□ 2.08
FOXP4-202ENST00000373057 MIER1Q8N108 512 aa28.03■■■□□ 2.08
FOXP4-202ENST00000373057 APLP2Q06481 763 aa27.99■■■□□ 2.07
FOXP4-202ENST00000373057 RUSC2Q8N2Y8 1516 aa27.96■■■□□ 2.07
FOXP4-202ENST00000373057 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
FOXP4-202ENST00000373057 TNIKQ9UKE5 1360 aa27.76■■■□□ 2.03
FOXP4-202ENST00000373057 ITGAEP38570 1179 aa27.74■■■□□ 2.03
FOXP4-202ENST00000373057 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
FOXP4-202ENST00000373057 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
FOXP4-202ENST00000373057 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
FOXP4-202ENST00000373057 SMARCA2P51531 1590 aa27.57■■■□□ 2
FOXP4-202ENST00000373057 GOLGA3Q08378 1498 aa27.52■■■□□ 2
FOXP4-202ENST00000373057 SMARCA4P51532 1647 aa27.52■■■□□ 2
FOXP4-202ENST00000373057 CLIP1P30622 1438 aa27.52■■■□□ 2
FOXP4-202ENST00000373057 BCANQ96GW7 911 aa27.36■■□□□ 1.97
FOXP4-202ENST00000373057 EEA1Q15075 1411 aa27.34■■□□□ 1.97
FOXP4-202ENST00000373057 KANK4Q5T7N3 995 aaPredicted RBP27.3■■□□□ 1.96
FOXP4-202ENST00000373057 ATP1B4Q9UN42 357 aaPredicted RBP27.29■■□□□ 1.96
FOXP4-202ENST00000373057 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
FOXP4-202ENST00000373057 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
FOXP4-202ENST00000373057 KCNH8Q96L42 1107 aa27.22■■□□□ 1.95
FOXP4-202ENST00000373057 VPS8Q8N3P4 1428 aa27.21■■□□□ 1.95
FOXP4-202ENST00000373057 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
FOXP4-202ENST00000373057 HIRIP3Q9BW71 556 aaPredicted RBP27.16■■□□□ 1.94
FOXP4-202ENST00000373057 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
FOXP4-202ENST00000373057 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
FOXP4-202ENST00000373057 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
FOXP4-202ENST00000373057 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
FOXP4-202ENST00000373057 DDX10Q13206 875 aaKnown RBP27.02■■□□□ 1.92
FOXP4-202ENST00000373057 FAM50AQ14320 339 aaKnown RBP27.02■■□□□ 1.92
FOXP4-202ENST00000373057 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
FOXP4-202ENST00000373057 SIN3AQ96ST3 1273 aa26.94■■□□□ 1.9
FOXP4-202ENST00000373057 KIF21BO75037 1637 aa26.94■■□□□ 1.9
FOXP4-202ENST00000373057 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
FOXP4-202ENST00000373057 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
FOXP4-202ENST00000373057 FKBP8Q14318 412 aa26.91■■□□□ 1.9
FOXP4-202ENST00000373057 TRIM52Q96A61 297 aa26.89■■□□□ 1.89
FOXP4-202ENST00000373057 TSHZ2Q9NRE2 1034 aa26.85■■□□□ 1.89
FOXP4-202ENST00000373057 CCNB3Q8WWL7 1395 aa26.75■■□□□ 1.87
FOXP4-202ENST00000373057 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
FOXP4-202ENST00000373057 NEFLP07196 543 aa26.7■■□□□ 1.87
FOXP4-202ENST00000373057 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.86
FOXP4-202ENST00000373057 RAB3GAP2Q9H2M9 1393 aa26.69■■□□□ 1.86
FOXP4-202ENST00000373057 IRX6P78412 446 aaPredicted RBP26.63■■□□□ 1.85
FOXP4-202ENST00000373057 CNGB1Q14028 1251 aaPredicted RBP26.6■■□□□ 1.85
FOXP4-202ENST00000373057 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
FOXP4-202ENST00000373057 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
FOXP4-202ENST00000373057 ANP32CO43423 234 aa26.54■■□□□ 1.84
FOXP4-202ENST00000373057 ANP32EQ9BTT0 268 aa26.53■■□□□ 1.84
FOXP4-202ENST00000373057 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
FOXP4-202ENST00000373057 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
FOXP4-202ENST00000373057 BCL11AQ9H165 835 aa26.5■■□□□ 1.83
FOXP4-202ENST00000373057 RRBP1Q9P2E9 1410 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms