RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
CLN5-208ENST00000636183 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.82
CLN5-208ENST00000636183 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
CLN5-208ENST00000636183 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
CLN5-208ENST00000636183 FAM9AQ8IZU1 332 aaPredicted RBP25.76■■□□□ 1.71
CLN5-208ENST00000636183 APLP2Q06481 763 aa25.61■■□□□ 1.69
CLN5-208ENST00000636183 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.66
CLN5-208ENST00000636183 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
CLN5-208ENST00000636183 ATP1B4Q9UN42 357 aaPredicted RBP25.28■■□□□ 1.64
CLN5-208ENST00000636183 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
CLN5-208ENST00000636183 MYT1LQ9UL68 1186 aa24.86■■□□□ 1.57
CLN5-208ENST00000636183 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
CLN5-208ENST00000636183 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
CLN5-208ENST00000636183 ERICH6Q7L0X2 663 aa24.54■■□□□ 1.52
CLN5-208ENST00000636183 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
CLN5-208ENST00000636183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
CLN5-208ENST00000636183 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
CLN5-208ENST00000636183 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
CLN5-208ENST00000636183 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
CLN5-208ENST00000636183 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
CLN5-208ENST00000636183 POLR3GLQ9BT43 218 aa24.18■■□□□ 1.46
CLN5-208ENST00000636183 SLC4A1APQ9BWU0 796 aaKnown RBP24.13■■□□□ 1.45
CLN5-208ENST00000636183 CNGB1Q14028 1251 aaPredicted RBP24.03■■□□□ 1.44
CLN5-208ENST00000636183 NEFLP07196 543 aa23.9■■□□□ 1.42
CLN5-208ENST00000636183 ITGAEP38570 1179 aa23.88■■□□□ 1.41
CLN5-208ENST00000636183 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
CLN5-208ENST00000636183 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
CLN5-208ENST00000636183 CENPBP07199 599 aaPredicted RBP23.84■■□□□ 1.41
CLN5-208ENST00000636183 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.37
CLN5-208ENST00000636183 MYT1Q01538 1121 aa23.58■■□□□ 1.37
CLN5-208ENST00000636183 SLC24A1O60721 1099 aa23.55■■□□□ 1.36
CLN5-208ENST00000636183 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
CLN5-208ENST00000636183 BCANQ96GW7 911 aa23.48■■□□□ 1.35
CLN5-208ENST00000636183 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
CLN5-208ENST00000636183 FBLN2P98095 1184 aa23.35■■□□□ 1.33
CLN5-208ENST00000636183 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
CLN5-208ENST00000636183 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
CLN5-208ENST00000636183 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
CLN5-208ENST00000636183 FAM50AQ14320 339 aaKnown RBP23.08■■□□□ 1.29
CLN5-208ENST00000636183 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLN5-208ENST00000636183 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
CLN5-208ENST00000636183 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
CLN5-208ENST00000636183 ZBTB47Q9UFB7 747 aaPredicted RBP22.97■■□□□ 1.27
CLN5-208ENST00000636183 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
CLN5-208ENST00000636183 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
CLN5-208ENST00000636183 A0A0G2JS52 829 aa22.84■■□□□ 1.25
CLN5-208ENST00000636183 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
CLN5-208ENST00000636183 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
CLN5-208ENST00000636183 STAG3Q9UJ98 1225 aa22.74■■□□□ 1.23
CLN5-208ENST00000636183 NEFMP07197 916 aa22.72■■□□□ 1.23
CLN5-208ENST00000636183 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
CLN5-208ENST00000636183 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
CLN5-208ENST00000636183 ABCC9O60706 1549 aa22.69■■□□□ 1.22
CLN5-208ENST00000636183 CANXP27824 592 aaKnown RBP22.66■■□□□ 1.22
CLN5-208ENST00000636183 PLEKHG5O94827 1062 aa22.65■■□□□ 1.22
CLN5-208ENST00000636183 CHGAP10645 457 aaKnown RBP22.63■■□□□ 1.21
CLN5-208ENST00000636183 ZNF777Q9ULD5 760 aaPredicted RBP22.61■■□□□ 1.21
CLN5-208ENST00000636183 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
CLN5-208ENST00000636183 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
CLN5-208ENST00000636183 NPM1P06748 294 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLN5-208ENST00000636183 ZBTB7CA1YPR0 619 aa22.43■■□□□ 1.18
CLN5-208ENST00000636183 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
CLN5-208ENST00000636183 HRCP23327 699 aa22.41■■□□□ 1.18
CLN5-208ENST00000636183 ANP32CO43423 234 aa22.27■■□□□ 1.16
CLN5-208ENST00000636183 C14orf37Q86TY3 774 aa22.25■■□□□ 1.15
CLN5-208ENST00000636183 HAP1P54257 671 aaPredicted RBP22.22■■□□□ 1.15
CLN5-208ENST00000636183 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
CLN5-208ENST00000636183 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
CLN5-208ENST00000636183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
CLN5-208ENST00000636183 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
CLN5-208ENST00000636183 ARXQ96QS3 562 aa22.11■■□□□ 1.13
CLN5-208ENST00000636183 TULP1O00294 542 aaPredicted RBP22.08■■□□□ 1.12
CLN5-208ENST00000636183 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.12
CLN5-208ENST00000636183 HSP90AA1P07900 732 aaKnown RBP21.98■■□□□ 1.11
CLN5-208ENST00000636183 CDK11BP21127 795 aaKnown RBP21.96■■□□□ 1.11
CLN5-208ENST00000636183 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
CLN5-208ENST00000636183 SALL2Q9Y467 1007 aaPredicted RBP21.94■■□□□ 1.1
CLN5-208ENST00000636183 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
CLN5-208ENST00000636183 NPHP1O15259 732 aa21.93■■□□□ 1.1
CLN5-208ENST00000636183 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
CLN5-208ENST00000636183 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
CLN5-208ENST00000636183 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
CLN5-208ENST00000636183 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
CLN5-208ENST00000636183 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
CLN5-208ENST00000636183 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
CLN5-208ENST00000636183 ANP32BQ92688 251 aaKnown RBP21.74■■□□□ 1.07
CLN5-208ENST00000636183 ANP32AP39687 249 aaKnown RBP21.69■■□□□ 1.06
CLN5-208ENST00000636183 UPF2Q9HAU5 1272 aaKnown RBP21.68■■□□□ 1.06
CLN5-208ENST00000636183 FAM9BQ8IZU0 186 aa21.66■■□□□ 1.06
CLN5-208ENST00000636183 TSPY4P0CV99 314 aa21.66■■□□□ 1.06
CLN5-208ENST00000636183 TSPY10P0CW01 314 aa21.66■■□□□ 1.06
CLN5-208ENST00000636183 TAOK2Q9UL54 1235 aa21.65■■□□□ 1.06
CLN5-208ENST00000636183 WDR43Q15061 677 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLN5-208ENST00000636183 TONSLQ96HA7 1378 aa21.62■■□□□ 1.05
CLN5-208ENST00000636183 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
CLN5-208ENST00000636183 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.04
CLN5-208ENST00000636183 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
CLN5-208ENST00000636183 MYH16Q9H6N6 1097 aa21.57■■□□□ 1.04
CLN5-208ENST00000636183 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.51■■□□□ 1.03
CLN5-208ENST00000636183 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms