RNA–Protein interactions for RNA: ENST00000398013.7

NIPA2-203, Transcript of NIPA magnesium transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPA2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-203ENST00000398013 NISCHQ9Y2I1 1504 aa45.66■■■■■ 4.9
NIPA2-203ENST00000398013 CCDC180Q9P1Z9 1646 aa38.89■■■■□ 3.82
NIPA2-203ENST00000398013 SHROOM4Q9ULL8 1493 aa38.7■■■■□ 3.79
NIPA2-203ENST00000398013 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
NIPA2-203ENST00000398013 SUPT5HO00267 1087 aaKnown RBP37.87■■■■□ 3.65
NIPA2-203ENST00000398013 DCAF8L2P0C7V8 631 aa37.71■■■■□ 3.63
NIPA2-203ENST00000398013 DCAF1Q9Y4B6 1507 aa37.5■■■■□ 3.59
NIPA2-203ENST00000398013 CHIC1Q5VXU3 224 aa36.86■■■■□ 3.49
NIPA2-203ENST00000398013 MYO15BQ96JP2 1530 aa36.7■■■■□ 3.47
NIPA2-203ENST00000398013 ABCC9O60706 1549 aa36.38■■■■□ 3.42
NIPA2-203ENST00000398013 SCRIBQ14160 1630 aa36.37■■■■□ 3.41
NIPA2-203ENST00000398013 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
NIPA2-203ENST00000398013 NACADO15069 1562 aa35.97■■■■□ 3.35
NIPA2-203ENST00000398013 LOC105371045A0A1W2PR82 267 aa35.73■■■■□ 3.31
NIPA2-203ENST00000398013 RB1CC1Q8TDY2 1594 aa35.65■■■■□ 3.3
NIPA2-203ENST00000398013 CECR2Q9BXF3 1484 aa35.62■■■■□ 3.29
NIPA2-203ENST00000398013 MROH2BQ7Z745 1585 aa35.49■■■■□ 3.27
NIPA2-203ENST00000398013 PCGF6Q9BYE7 350 aa35.48■■■■□ 3.27
NIPA2-203ENST00000398013 HRCP23327 699 aa35.44■■■■□ 3.26
NIPA2-203ENST00000398013 TRIM41Q8WV44 630 aa35.31■■■■□ 3.24
NIPA2-203ENST00000398013 WIZO95785 1651 aa35.27■■■■□ 3.24
NIPA2-203ENST00000398013 BAZ1AQ9NRL2 1556 aaPredicted RBP35.05■■■■□ 3.2
NIPA2-203ENST00000398013 FAM9AQ8IZU1 332 aaPredicted RBP34.98■■■■□ 3.19
NIPA2-203ENST00000398013 UNC13AQ9UPW8 1703 aa34.9■■■■□ 3.18
NIPA2-203ENST00000398013 TRIM26Q12899 539 aaPredicted RBP34.88■■■■□ 3.17
NIPA2-203ENST00000398013 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
NIPA2-203ENST00000398013 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
NIPA2-203ENST00000398013 TOP2AP11388 1531 aaKnown RBP34.73■■■■□ 3.15
NIPA2-203ENST00000398013 PPARGC1BQ86YN6 1023 aaKnown RBP34.72■■■■□ 3.15
NIPA2-203ENST00000398013 EHMT2Q96KQ7 1210 aa34.64■■■■□ 3.14
NIPA2-203ENST00000398013 CCDC88BA6NC98 1476 aa34.58■■■■□ 3.13
NIPA2-203ENST00000398013 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
NIPA2-203ENST00000398013 BICRAQ9NZM4 1560 aa34.51■■■■□ 3.11
NIPA2-203ENST00000398013 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
NIPA2-203ENST00000398013 ABCC8Q09428 1581 aa34.42■■■■□ 3.1
NIPA2-203ENST00000398013 PEG3Q9GZU2 1588 aa34.17■■■■□ 3.06
NIPA2-203ENST00000398013 SOGA1O94964 1423 aa34.08■■■■□ 3.05
NIPA2-203ENST00000398013 ZEB1P37275 1124 aaPredicted RBP34.01■■■■□ 3.04
NIPA2-203ENST00000398013 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
NIPA2-203ENST00000398013 ATAD2BQ9ULI0 1458 aa33.94■■■■□ 3.02
NIPA2-203ENST00000398013 EEA1Q15075 1411 aa33.87■■■■□ 3.01
NIPA2-203ENST00000398013 CSRNP3Q8WYN3 585 aa33.85■■■■□ 3.01
NIPA2-203ENST00000398013 WRNQ14191 1432 aaPredicted RBP eCLIP33.85■■■■□ 3.01
NIPA2-203ENST00000398013 CEP162Q5TB80 1403 aa33.84■■■■□ 3.01
NIPA2-203ENST00000398013 TNIKQ9UKE5 1360 aa33.82■■■■□ 3
NIPA2-203ENST00000398013 BAZ1BQ9UIG0 1483 aaKnown RBP33.79■■■■□ 3
NIPA2-203ENST00000398013 SYNJ1O43426 1573 aa33.73■■■□□ 2.99
NIPA2-203ENST00000398013 UBTFP17480 764 aaKnown RBP33.63■■■□□ 2.97
NIPA2-203ENST00000398013 GOLGA3Q08378 1498 aa33.63■■■□□ 2.97
NIPA2-203ENST00000398013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.5■■■□□ 2.95
NIPA2-203ENST00000398013 TTBK1Q5TCY1 1321 aaPredicted RBP33.49■■■□□ 2.95
NIPA2-203ENST00000398013 CEP164Q9UPV0 1460 aa33.45■■■□□ 2.95
NIPA2-203ENST00000398013 KIF21BO75037 1637 aa33.44■■■□□ 2.94
NIPA2-203ENST00000398013 CCER1Q8TC90 406 aaPredicted RBP33.36■■■□□ 2.93
NIPA2-203ENST00000398013 TOP2BQ02880 1626 aa33.33■■■□□ 2.93
NIPA2-203ENST00000398013 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
NIPA2-203ENST00000398013 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
NIPA2-203ENST00000398013 RAPGEF2Q9Y4G8 1499 aa33.25■■■□□ 2.91
NIPA2-203ENST00000398013 CLIP1P30622 1438 aa33.23■■■□□ 2.91
NIPA2-203ENST00000398013 BIVM-ERCC5R4GMW8 1640 aa33.22■■■□□ 2.91
NIPA2-203ENST00000398013 VPS8Q8N3P4 1428 aa33.08■■■□□ 2.89
NIPA2-203ENST00000398013 CUX1P39880 1505 aa33.05■■■□□ 2.88
NIPA2-203ENST00000398013 CFTRP13569 1480 aa33■■■□□ 2.87
NIPA2-203ENST00000398013 PRXQ9BXM0 1461 aa32.98■■■□□ 2.87
NIPA2-203ENST00000398013 RANGAP1P46060 587 aaPredicted RBP32.95■■■□□ 2.87
NIPA2-203ENST00000398013 ERICH3Q5RHP9 1530 aa32.93■■■□□ 2.86
NIPA2-203ENST00000398013 HNRNPUL2Q1KMD3 747 aaKnown RBP32.81■■■□□ 2.84
NIPA2-203ENST00000398013 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
NIPA2-203ENST00000398013 APLP2Q06481 763 aa32.8■■■□□ 2.84
NIPA2-203ENST00000398013 ARAP1Q96P48 1450 aa32.76■■■□□ 2.84
NIPA2-203ENST00000398013 PRDM2Q13029 1718 aa32.71■■■□□ 2.83
NIPA2-203ENST00000398013 DIEXFQ68CQ4 756 aaKnown RBP32.64■■■□□ 2.82
NIPA2-203ENST00000398013 CADPSQ9ULU8 1353 aa32.64■■■□□ 2.82
NIPA2-203ENST00000398013 SCAF1Q9H7N4 1312 aaKnown RBP32.55■■■□□ 2.8
NIPA2-203ENST00000398013 KANK4Q5T7N3 995 aaPredicted RBP32.54■■■□□ 2.8
NIPA2-203ENST00000398013 CUX2O14529 1486 aa32.53■■■□□ 2.8
NIPA2-203ENST00000398013 IGF1RP08069 1367 aa32.52■■■□□ 2.8
NIPA2-203ENST00000398013 CC2D2AQ9P2K1 1620 aa32.5■■■□□ 2.79
NIPA2-203ENST00000398013 ARHGAP35Q9NRY4 1499 aa32.5■■■□□ 2.79
NIPA2-203ENST00000398013 ZNF316A6NFI3 1004 aaPredicted RBP32.48■■■□□ 2.79
NIPA2-203ENST00000398013 FGD5Q6ZNL6 1462 aa32.45■■■□□ 2.78
NIPA2-203ENST00000398013 CARMIL1Q5VZK9 1371 aa32.33■■■□□ 2.77
NIPA2-203ENST00000398013 RRBP1Q9P2E9 1410 aaKnown RBP32.32■■■□□ 2.76
NIPA2-203ENST00000398013 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
NIPA2-203ENST00000398013 ACIN1Q9UKV3 1341 aaKnown RBP32.29■■■□□ 2.76
NIPA2-203ENST00000398013 NEUROD1Q13562 356 aa32.28■■■□□ 2.76
NIPA2-203ENST00000398013 DHX57Q6P158 1386 aaKnown RBP32.23■■■□□ 2.75
NIPA2-203ENST00000398013 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
NIPA2-203ENST00000398013 CCNB3Q8WWL7 1395 aa32.15■■■□□ 2.74
NIPA2-203ENST00000398013 CLSPNQ9HAW4 1339 aa32.15■■■□□ 2.74
NIPA2-203ENST00000398013 NESP48681 1621 aa32.14■■■□□ 2.74
NIPA2-203ENST00000398013 RAD54L2Q9Y4B4 1467 aa32.14■■■□□ 2.74
NIPA2-203ENST00000398013 TIAM1Q13009 1591 aa32.11■■■□□ 2.73
NIPA2-203ENST00000398013 TOPBP1Q92547 1522 aa32.11■■■□□ 2.73
NIPA2-203ENST00000398013 MAP3K1Q13233 1512 aa32.09■■■□□ 2.73
NIPA2-203ENST00000398013 POLA1P09884 1462 aaPredicted RBP32.09■■■□□ 2.73
NIPA2-203ENST00000398013 ABCA10Q8WWZ4 1543 aa32.09■■■□□ 2.73
NIPA2-203ENST00000398013 CENPBP07199 599 aaPredicted RBP32.05■■■□□ 2.72
NIPA2-203ENST00000398013 MIER1Q8N108 512 aa32.01■■■□□ 2.71
NIPA2-203ENST00000398013 LRRC9Q6ZRR7 1453 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms