RNA–Protein interactions for RNA: ENST00000371454.6

LRP8-204, Transcript of LDL receptor related protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRP8, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-204ENST00000371454 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
LRP8-204ENST00000371454 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
LRP8-204ENST00000371454 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
LRP8-204ENST00000371454 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
LRP8-204ENST00000371454 PCGF6Q9BYE7 350 aa32.39■■■□□ 2.78
LRP8-204ENST00000371454 PPARGC1BQ86YN6 1023 aaKnown RBP32.34■■■□□ 2.77
LRP8-204ENST00000371454 HRCP23327 699 aa32.06■■■□□ 2.72
LRP8-204ENST00000371454 MYO15BQ96JP2 1530 aa32.02■■■□□ 2.72
LRP8-204ENST00000371454 CHIC1Q5VXU3 224 aa31.97■■■□□ 2.71
LRP8-204ENST00000371454 LOC105371045A0A1W2PR82 267 aa31.83■■■□□ 2.69
LRP8-204ENST00000371454 EHMT2Q96KQ7 1210 aa31.67■■■□□ 2.66
LRP8-204ENST00000371454 FAM9AQ8IZU1 332 aaPredicted RBP31.2■■■□□ 2.58
LRP8-204ENST00000371454 ZCCHC6Q5VYS8 1495 aaKnown RBP31.02■■■□□ 2.56
LRP8-204ENST00000371454 CCDC180Q9P1Z9 1646 aa30.77■■■□□ 2.52
LRP8-204ENST00000371454 TRIM26Q12899 539 aaPredicted RBP30.75■■■□□ 2.51
LRP8-204ENST00000371454 TTBK1Q5TCY1 1321 aaPredicted RBP30.65■■■□□ 2.5
LRP8-204ENST00000371454 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
LRP8-204ENST00000371454 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
LRP8-204ENST00000371454 SCAF1Q9H7N4 1312 aaKnown RBP30.38■■■□□ 2.45
LRP8-204ENST00000371454 ABCC9O60706 1549 aa30.34■■■□□ 2.45
LRP8-204ENST00000371454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.25■■■□□ 2.43
LRP8-204ENST00000371454 CCER1Q8TC90 406 aaPredicted RBP29.97■■■□□ 2.39
LRP8-204ENST00000371454 ZEB1P37275 1124 aaPredicted RBP29.94■■■□□ 2.38
LRP8-204ENST00000371454 NEUROD1Q13562 356 aa29.83■■■□□ 2.37
LRP8-204ENST00000371454 YTHDC1Q96MU7 727 aaKnown RBP29.76■■■□□ 2.36
LRP8-204ENST00000371454 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
LRP8-204ENST00000371454 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
LRP8-204ENST00000371454 GTF3C3Q9Y5Q9 886 aa29.66■■■□□ 2.34
LRP8-204ENST00000371454 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
LRP8-204ENST00000371454 DIEXFQ68CQ4 756 aaKnown RBP29.54■■■□□ 2.32
LRP8-204ENST00000371454 ACIN1Q9UKV3 1341 aaKnown RBP29.54■■■□□ 2.32
LRP8-204ENST00000371454 PELP1Q8IZL8 1130 aaKnown RBP29.5■■■□□ 2.31
LRP8-204ENST00000371454 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
LRP8-204ENST00000371454 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
LRP8-204ENST00000371454 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
LRP8-204ENST00000371454 UBTFP17480 764 aaKnown RBP29.23■■■□□ 2.27
LRP8-204ENST00000371454 CENPBP07199 599 aaPredicted RBP29.19■■■□□ 2.26
LRP8-204ENST00000371454 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
LRP8-204ENST00000371454 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
LRP8-204ENST00000371454 MIER1Q8N108 512 aa28.98■■■□□ 2.23
LRP8-204ENST00000371454 NACADO15069 1562 aa28.94■■■□□ 2.22
LRP8-204ENST00000371454 WIZO95785 1651 aa28.89■■■□□ 2.22
LRP8-204ENST00000371454 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
LRP8-204ENST00000371454 ZNF316A6NFI3 1004 aaPredicted RBP28.87■■■□□ 2.21
LRP8-204ENST00000371454 SOGA1O94964 1423 aa28.81■■■□□ 2.2
LRP8-204ENST00000371454 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
LRP8-204ENST00000371454 CEP162Q5TB80 1403 aa28.73■■■□□ 2.19
LRP8-204ENST00000371454 RUSC2Q8N2Y8 1516 aa28.72■■■□□ 2.19
LRP8-204ENST00000371454 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
LRP8-204ENST00000371454 ITGAEP38570 1179 aa28.53■■■□□ 2.16
LRP8-204ENST00000371454 APLP2Q06481 763 aa28.47■■■□□ 2.15
LRP8-204ENST00000371454 BCANQ96GW7 911 aa28.39■■■□□ 2.13
LRP8-204ENST00000371454 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
LRP8-204ENST00000371454 KCNH8Q96L42 1107 aa28.26■■■□□ 2.12
LRP8-204ENST00000371454 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
LRP8-204ENST00000371454 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
LRP8-204ENST00000371454 WRNQ14191 1432 aaPredicted RBP eCLIP28.16■■■□□ 2.1
LRP8-204ENST00000371454 HIRIP3Q9BW71 556 aaPredicted RBP28.12■■■□□ 2.09
LRP8-204ENST00000371454 SUPT16HQ9Y5B9 1047 aaKnown RBP28.09■■■□□ 2.09
LRP8-204ENST00000371454 CLIP1P30622 1438 aa28.08■■■□□ 2.09
LRP8-204ENST00000371454 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
LRP8-204ENST00000371454 KANK4Q5T7N3 995 aaPredicted RBP28.05■■■□□ 2.08
LRP8-204ENST00000371454 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
LRP8-204ENST00000371454 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
LRP8-204ENST00000371454 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
LRP8-204ENST00000371454 ATP1B4Q9UN42 357 aaPredicted RBP27.94■■■□□ 2.06
LRP8-204ENST00000371454 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
LRP8-204ENST00000371454 RAPGEF2Q9Y4G8 1499 aa27.88■■■□□ 2.05
LRP8-204ENST00000371454 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
LRP8-204ENST00000371454 MYT1Q01538 1121 aa27.87■■■□□ 2.05
LRP8-204ENST00000371454 DDX10Q13206 875 aaKnown RBP27.83■■■□□ 2.05
LRP8-204ENST00000371454 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
LRP8-204ENST00000371454 TRIM52Q96A61 297 aa27.79■■■□□ 2.04
LRP8-204ENST00000371454 FKBP8Q14318 412 aa27.78■■■□□ 2.04
LRP8-204ENST00000371454 SIN3AQ96ST3 1273 aa27.74■■■□□ 2.03
LRP8-204ENST00000371454 DHX57Q6P158 1386 aaKnown RBP27.74■■■□□ 2.03
LRP8-204ENST00000371454 VPS8Q8N3P4 1428 aa27.74■■■□□ 2.03
LRP8-204ENST00000371454 P3H3Q8IVL6 736 aa27.74■■■□□ 2.03
LRP8-204ENST00000371454 CEP164Q9UPV0 1460 aa27.69■■■□□ 2.02
LRP8-204ENST00000371454 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
LRP8-204ENST00000371454 EEA1Q15075 1411 aa27.65■■■□□ 2.02
LRP8-204ENST00000371454 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
LRP8-204ENST00000371454 IRX6P78412 446 aaPredicted RBP27.62■■■□□ 2.01
LRP8-204ENST00000371454 CNGB1Q14028 1251 aaPredicted RBP27.53■■■□□ 2
LRP8-204ENST00000371454 KIF21BO75037 1637 aa27.52■■■□□ 2
LRP8-204ENST00000371454 ANP32EQ9BTT0 268 aa27.45■■□□□ 1.99
LRP8-204ENST00000371454 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
LRP8-204ENST00000371454 SENP3-EIF4A1A0A087X0R7 540 aa27.41■■□□□ 1.98
LRP8-204ENST00000371454 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
LRP8-204ENST00000371454 RAB3GAP2Q9H2M9 1393 aa27.34■■□□□ 1.97
LRP8-204ENST00000371454 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
LRP8-204ENST00000371454 NEFLP07196 543 aa27.34■■□□□ 1.97
LRP8-204ENST00000371454 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
LRP8-204ENST00000371454 RBM19Q9Y4C8 960 aaKnown RBP27.28■■□□□ 1.96
LRP8-204ENST00000371454 BCL11AQ9H165 835 aa27.26■■□□□ 1.95
LRP8-204ENST00000371454 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
LRP8-204ENST00000371454 ANP32CO43423 234 aa27.16■■□□□ 1.94
LRP8-204ENST00000371454 ARID3CA6NKF2 412 aa27.14■■□□□ 1.93
LRP8-204ENST00000371454 CLSPNQ9HAW4 1339 aa27.14■■□□□ 1.93
LRP8-204ENST00000371454 HNRNPUQ00839 825 aaKnown RBP eCLIP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms