Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 59.94□□□□□ -0.826e-6■□□□□ 9.9
U2AF2P26368 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.916e-6■□□□□ 9.9
U2AF2P26368 U2.6-201ENST00000619225 191 ntBASIC2.34□□□□□ -2.036e-6■□□□□ 9.9
U2AF2P26368 TTLL3-210ENST00000427220 3233 ntTSL 1 (best)22.53■■□□□ 1.22e-7■□□□□ 9.9
U2AF2P26368 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.172e-7■□□□□ 9.9
U2AF2P26368 TTLL3-214ENST00000431204 1041 ntTSL 512.99□□□□□ -0.332e-7■□□□□ 9.9
U2AF2P26368 SNHG1-207ENST00000537965 578 ntTSL 55.72□□□□□ -1.494e-14■□□□□ 9.9
U2AF2P26368 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.08■■□□□ 1.131e-10■□□□□ 9.9
U2AF2P26368 SLC47A1-205ENST00000497548 1900 ntTSL 220.15■□□□□ 0.821e-10■□□□□ 9.9
U2AF2P26368 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.01■□□□□ 0.791e-10■□□□□ 9.9
U2AF2P26368 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.32■□□□□ 0.521e-10■□□□□ 9.9
U2AF2P26368 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.171e-10■□□□□ 9.9
U2AF2P26368 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.081e-10■□□□□ 9.9
U2AF2P26368 PRR4-209ENST00000541456 454 ntTSL 34.46□□□□□ -1.79e-9■□□□□ 9.9
U2AF2P26368 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.684e-8■□□□□ 9.9
U2AF2P26368 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.124e-8■□□□□ 9.9
U2AF2P26368 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.344e-8■□□□□ 9.9
U2AF2P26368 SLC44A1-205ENST00000470972 10433 ntTSL 1 (best)12.8□□□□□ -0.364e-8■□□□□ 9.9
U2AF2P26368 USP34-209ENST00000468703 228 ntTSL 50.82□□□□□ -2.285e-8■□□□□ 9.9
U2AF2P26368 OSBPL2-209ENST00000620616 2099 ntTSL 521.26■□□□□ 0.998e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.218e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC15.53■□□□□ 0.088e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-210ENST00000621075 2838 ntTSL 215.53■□□□□ 0.088e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-202ENST00000358053 3936 ntTSL 1 (best) BASIC12.46□□□□□ -0.418e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-211ENST00000622332 754 ntTSL 311.33□□□□□ -0.68e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-204ENST00000448156 450 ntTSL 310.26□□□□□ -0.778e-11■□□□□ 9.9
U2AF2P26368 OSBPL2-207ENST00000618198 693 ntTSL 29.94□□□□□ -0.828e-11■□□□□ 9.9
U2AF2P26368 ZCCHC11-202ENST00000355809 2152 ntTSL 1 (best) BASIC12.51□□□□□ -0.416e-7■□□□□ 9.9
U2AF2P26368 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.44■■□□□ 1.987e-10■□□□□ 9.9
U2AF2P26368 PSMD11-206ENST00000578213 480 ntTSL 325.33■■□□□ 1.657e-10■□□□□ 9.9
U2AF2P26368 PAPOLA-207ENST00000554130 848 ntTSL 524.48■■□□□ 1.517e-10■□□□□ 9.9
U2AF2P26368 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.927e-10■□□□□ 9.9
U2AF2P26368 PAPOLA-218ENST00000556248 652 ntTSL 517.09■□□□□ 0.337e-10■□□□□ 9.9
U2AF2P26368 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.321e-8■□□□□ 9.9
U2AF2P26368 PSMD11-208ENST00000579451 582 ntTSL 216.63■□□□□ 0.257e-10■□□□□ 9.9
U2AF2P26368 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.131e-8■□□□□ 9.9
U2AF2P26368 PSMD11-207ENST00000578397 1178 ntTSL 215.46■□□□□ 0.077e-10■□□□□ 9.9
U2AF2P26368 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.017e-10■□□□□ 9.9
U2AF2P26368 PLXNB1-203ENST00000449094 3863 ntTSL 214.36□□□□□ -0.111e-8■□□□□ 9.9
U2AF2P26368 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.171e-8■□□□□ 9.9
U2AF2P26368 PSMD11-209ENST00000580904 540 ntTSL 48.2□□□□□ -1.17e-10■□□□□ 9.9
U2AF2P26368 PAPOLA-221ENST00000556619 584 ntTSL 32.71□□□□□ -1.987e-10■□□□□ 9.9
U2AF2P26368 ROBO1-207ENST00000488735 593 ntTSL 42.51□□□□□ -2.017e-10■□□□□ 9.9
U2AF2P26368 PAPOLA-210ENST00000554887 547 ntTSL 41.77□□□□□ -2.137e-10■□□□□ 9.9
U2AF2P26368 LONP2-206ENST00000565867 1969 ntTSL 310.84□□□□□ -0.674e-9■□□□□ 9.9
U2AF2P26368 SLC25A10-207ENST00000574129 1523 ntTSL 535.59■■■■□ 3.296e-8■□□□□ 9.9
U2AF2P26368 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.88■■■■□ 3.016e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-204ENST00000417791 915 ntTSL 530.43■■■□□ 2.466e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.266e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-208ENST00000433956 821 ntTSL 328.97■■■□□ 2.236e-8■□□□□ 9.9
U2AF2P26368 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.116e-8■□□□□ 9.9
U2AF2P26368 FANCA-228ENST00000567943 860 ntTSL 328.18■■■□□ 2.16e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.13■■■□□ 2.096e-8■□□□□ 9.9
U2AF2P26368 RERE-208ENST00000465125 396 ntTSL 527.86■■■□□ 2.056e-8■□□□□ 9.9
U2AF2P26368 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.62■■■□□ 2.012e-10■□□□□ 9.9
U2AF2P26368 TMEM150A-209ENST00000444380 1810 ntTSL 527.06■■□□□ 1.926e-8■□□□□ 9.9
U2AF2P26368 STRBP-203ENST00000407982 2751 ntTSL 1 (best)26.25■■□□□ 1.794e-8■□□□□ 9.9
U2AF2P26368 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.2■■□□□ 1.784e-8■□□□□ 9.9
U2AF2P26368 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.716e-8■□□□□ 9.9
U2AF2P26368 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.22■■□□□ 1.636e-8■□□□□ 9.9
U2AF2P26368 ISOC1-202ENST00000514194 581 ntTSL 324.25■■□□□ 1.476e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-207ENST00000431593 2323 ntTSL 223.66■■□□□ 1.386e-8■□□□□ 9.9
U2AF2P26368 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.65■■□□□ 1.386e-8■□□□□ 9.9
U2AF2P26368 RNF4-205ENST00000504224 560 ntTSL 423.57■■□□□ 1.366e-8■□□□□ 9.9
U2AF2P26368 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.284e-8■□□□□ 9.9
U2AF2P26368 OTULIN-202ENST00000503023 911 ntTSL 522.52■■□□□ 1.26e-8■□□□□ 9.9
U2AF2P26368 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.196e-8■□□□□ 9.9
U2AF2P26368 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.16e-8■□□□□ 9.9
U2AF2P26368 ELF2-212ENST00000514606 2219 ntTSL 220.54■□□□□ 0.886e-8■□□□□ 9.9
U2AF2P26368 RNF4-204ENST00000503659 558 ntTSL 420.4■□□□□ 0.866e-8■□□□□ 9.9
U2AF2P26368 RNF4-209ENST00000507784 582 ntTSL 220.03■□□□□ 0.86e-8■□□□□ 9.9
U2AF2P26368 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.772e-10■□□□□ 9.9
U2AF2P26368 OTULIN-206ENST00000514913 420 ntTSL 519.69■□□□□ 0.746e-8■□□□□ 9.9
U2AF2P26368 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.62■□□□□ 0.736e-8■□□□□ 9.9
U2AF2P26368 ELF2-205ENST00000420916 882 ntTSL 1 (best)19.36■□□□□ 0.696e-8■□□□□ 9.9
U2AF2P26368 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.34■□□□□ 0.696e-8■□□□□ 9.9
U2AF2P26368 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.676e-8■□□□□ 9.9
U2AF2P26368 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.522e-10■□□□□ 9.9
U2AF2P26368 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.526e-8■□□□□ 9.9
U2AF2P26368 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.79■□□□□ 0.446e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.446e-8■□□□□ 9.9
U2AF2P26368 RNF4-213ENST00000509388 569 ntTSL 316.88■□□□□ 0.296e-8■□□□□ 9.9
U2AF2P26368 SLC25A10-204ENST00000570310 595 ntTSL 316.62■□□□□ 0.256e-8■□□□□ 9.9
U2AF2P26368 RNF4-208ENST00000507247 616 ntTSL 1 (best)16.26■□□□□ 0.196e-8■□□□□ 9.9
U2AF2P26368 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.196e-8■□□□□ 9.9
U2AF2P26368 RNF4-202ENST00000502316 855 ntTSL 216.14■□□□□ 0.176e-8■□□□□ 9.9
U2AF2P26368 SLC25A10-206ENST00000573246 898 ntTSL 315.86■□□□□ 0.136e-8■□□□□ 9.9
U2AF2P26368 MAP3K8-205ENST00000415139 1026 ntTSL 315.57■□□□□ 0.082e-10■□□□□ 9.9
U2AF2P26368 RERE-215ENST00000492766 367 ntTSL 315.4■□□□□ 0.066e-8■□□□□ 9.9
U2AF2P26368 RNF4-215ENST00000511843 586 ntTSL 514.84□□□□□ -0.036e-8■□□□□ 9.9
U2AF2P26368 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC14.59□□□□□ -0.076e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-210ENST00000451147 779 ntTSL 314.4□□□□□ -0.16e-8■□□□□ 9.9
U2AF2P26368 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.126e-8■□□□□ 9.9
U2AF2P26368 LRIG1-205ENST00000495037 2336 ntTSL 213.04□□□□□ -0.326e-8■□□□□ 9.9
U2AF2P26368 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC12.55□□□□□ -0.46e-8■□□□□ 9.9
U2AF2P26368 TMEM150A-205ENST00000422458 803 ntTSL 312.49□□□□□ -0.416e-8■□□□□ 9.9
U2AF2P26368 RNF4-218ENST00000513284 517 ntTSL 412.25□□□□□ -0.456e-8■□□□□ 9.9
U2AF2P26368 RNF4-212ENST00000509258 893 ntTSL 1 (best) BASIC12.11□□□□□ -0.476e-8■□□□□ 9.9
U2AF2P26368 FANCA-227ENST00000567883 650 ntTSL 212.05□□□□□ -0.486e-8■□□□□ 9.9
U2AF2P26368 WDR59-222ENST00000570070 565 ntTSL 411.92□□□□□ -0.52e-10■□□□□ 9.9
Retrieved 100 of 36,523 protein–RNA pairs in 36.3 ms