RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 NISCHQ9Y2I1 1504 aa53.13■■■■■ 6.1
PSMD11-206ENST00000578213 CCDC180Q9P1Z9 1646 aa47.18■■■■■ 5.14
PSMD11-206ENST00000578213 ABCC9O60706 1549 aa45.31■■■■■ 4.84
PSMD11-206ENST00000578213 ZCCHC6Q5VYS8 1495 aaKnown RBP44.41■■■■■ 4.7
PSMD11-206ENST00000578213 NACADO15069 1562 aa44.13■■■■■ 4.65
PSMD11-206ENST00000578213 MYO15BQ96JP2 1530 aa44.1■■■■■ 4.65
PSMD11-206ENST00000578213 DCAF1Q9Y4B6 1507 aa44.1■■■■■ 4.65
PSMD11-206ENST00000578213 RB1CC1Q8TDY2 1594 aa44.03■■■■■ 4.64
PSMD11-206ENST00000578213 DCAF8L2P0C7V8 631 aa43.88■■■■■ 4.62
PSMD11-206ENST00000578213 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
PSMD11-206ENST00000578213 SCRIBQ14160 1630 aa42.9■■■■■ 4.46
PSMD11-206ENST00000578213 BICRAQ9NZM4 1560 aa42.61■■■■■ 4.41
PSMD11-206ENST00000578213 SHROOM4Q9ULL8 1493 aa42.38■■■■■ 4.38
PSMD11-206ENST00000578213 PABPN1Q86U42 306 aaKnown RBP eCLIP42.32■■■■■ 4.37
PSMD11-206ENST00000578213 EIF4G1Q04637 1599 aaKnown RBP41.46■■■■■ 4.23
PSMD11-206ENST00000578213 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
PSMD11-206ENST00000578213 BAZ1AQ9NRL2 1556 aaPredicted RBP41.2■■■■■ 4.19
PSMD11-206ENST00000578213 SMARCA4P51532 1647 aa41.16■■■■■ 4.18
PSMD11-206ENST00000578213 CC2D2AQ9P2K1 1620 aa41.14■■■■■ 4.18
PSMD11-206ENST00000578213 DNAJC5BQ9UF47 199 aa40.93■■■■■ 4.14
PSMD11-206ENST00000578213 MROH2BQ7Z745 1585 aa40.9■■■■■ 4.14
PSMD11-206ENST00000578213 PEG3Q9GZU2 1588 aa40.8■■■■■ 4.12
PSMD11-206ENST00000578213 SMARCA2P51531 1590 aa40.79■■■■■ 4.12
PSMD11-206ENST00000578213 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
PSMD11-206ENST00000578213 NCAPD3P42695 1498 aa40.63■■■■■ 4.09
PSMD11-206ENST00000578213 RSF1Q96T23 1441 aaPredicted RBP40.61■■■■■ 4.09
PSMD11-206ENST00000578213 HMGXB3Q12766 1538 aa40.58■■■■■ 4.09
PSMD11-206ENST00000578213 WIZO95785 1651 aa40.53■■■■■ 4.08
PSMD11-206ENST00000578213 BAZ1BQ9UIG0 1483 aaKnown RBP40.44■■■■■ 4.06
PSMD11-206ENST00000578213 TOP2AP11388 1531 aaKnown RBP40.19■■■■■ 4.02
PSMD11-206ENST00000578213 SUPT5HO00267 1087 aaKnown RBP39.85■■■■□ 3.97
PSMD11-206ENST00000578213 CCDC88BA6NC98 1476 aa39.61■■■■□ 3.93
PSMD11-206ENST00000578213 LAMC3Q9Y6N6 1575 aa39.55■■■■□ 3.92
PSMD11-206ENST00000578213 CADPSQ9ULU8 1353 aa39.43■■■■□ 3.9
PSMD11-206ENST00000578213 NESP48681 1621 aa39.38■■■■□ 3.89
PSMD11-206ENST00000578213 PRDM2Q13029 1718 aa39.37■■■■□ 3.89
PSMD11-206ENST00000578213 CFTRP13569 1480 aa39.36■■■■□ 3.89
PSMD11-206ENST00000578213 PDS5BQ9NTI5 1447 aa39.18■■■■□ 3.86
PSMD11-206ENST00000578213 KIF21AQ7Z4S6 1674 aa39.11■■■■□ 3.85
PSMD11-206ENST00000578213 ERCC6Q03468 1493 aa39.08■■■■□ 3.85
PSMD11-206ENST00000578213 FANCD2Q9BXW9 1451 aa38.99■■■■□ 3.83
PSMD11-206ENST00000578213 CEP164Q9UPV0 1460 aa38.94■■■■□ 3.82
PSMD11-206ENST00000578213 THOC2Q8NI27 1593 aaKnown RBP38.83■■■■□ 3.81
PSMD11-206ENST00000578213 MRC2Q9UBG0 1479 aa38.76■■■■□ 3.8
PSMD11-206ENST00000578213 WDR62O43379 1518 aa38.66■■■■□ 3.78
PSMD11-206ENST00000578213 ABCC8Q09428 1581 aa38.57■■■■□ 3.76
PSMD11-206ENST00000578213 URB2Q14146 1524 aaKnown RBP38.56■■■■□ 3.76
PSMD11-206ENST00000578213 CUX2O14529 1486 aa38.55■■■■□ 3.76
PSMD11-206ENST00000578213 DNMBPQ6XZF7 1577 aa38.53■■■■□ 3.76
PSMD11-206ENST00000578213 TOPBP1Q92547 1522 aa38.46■■■■□ 3.75
PSMD11-206ENST00000578213 CUX1P39880 1505 aa38.36■■■■□ 3.73
PSMD11-206ENST00000578213 WRNQ14191 1432 aaPredicted RBP eCLIP38.32■■■■□ 3.73
PSMD11-206ENST00000578213 BIVM-ERCC5R4GMW8 1640 aa38.3■■■■□ 3.72
PSMD11-206ENST00000578213 TOP2BQ02880 1626 aa38.27■■■■□ 3.72
PSMD11-206ENST00000578213 SYNJ1O43426 1573 aa38.22■■■■□ 3.71
PSMD11-206ENST00000578213 POLA1P09884 1462 aaPredicted RBP38.16■■■■□ 3.7
PSMD11-206ENST00000578213 FGD5Q6ZNL6 1462 aa38.14■■■■□ 3.7
PSMD11-206ENST00000578213 IFT140Q96RY7 1462 aa38.09■■■■□ 3.69
PSMD11-206ENST00000578213 TARBP1Q13395 1621 aaKnown RBP38.05■■■■□ 3.68
PSMD11-206ENST00000578213 SOGA1O94964 1423 aa37.95■■■■□ 3.67
PSMD11-206ENST00000578213 WDR97A6NE52 1622 aa37.95■■■■□ 3.67
PSMD11-206ENST00000578213 RAD54L2Q9Y4B4 1467 aa37.9■■■■□ 3.66
PSMD11-206ENST00000578213 ABCA10Q8WWZ4 1543 aa37.85■■■■□ 3.65
PSMD11-206ENST00000578213 EIF4G3O43432 1585 aaKnown RBP37.8■■■■□ 3.64
PSMD11-206ENST00000578213 ZNF608Q9ULD9 1512 aaPredicted RBP37.77■■■■□ 3.64
PSMD11-206ENST00000578213 ABCA5Q8WWZ7 1642 aa37.7■■■■□ 3.63
PSMD11-206ENST00000578213 TRIM41Q8WV44 630 aa37.69■■■■□ 3.62
PSMD11-206ENST00000578213 PBRM1Q86U86 1689 aa37.61■■■■□ 3.61
PSMD11-206ENST00000578213 AQRO60306 1485 aaKnown RBP eCLIP37.61■■■■□ 3.613e-6■■■■□ 24.7
PSMD11-206ENST00000578213 TDRD9Q8NDG6 1382 aaKnown RBP37.61■■■■□ 3.61
PSMD11-206ENST00000578213 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
PSMD11-206ENST00000578213 CHIC1Q5VXU3 224 aa37.57■■■■□ 3.6
PSMD11-206ENST00000578213 GRIN2BQ13224 1484 aa37.52■■■■□ 3.6
PSMD11-206ENST00000578213 KIF27Q86VH2 1401 aa37.49■■■■□ 3.59
PSMD11-206ENST00000578213 ERICH3Q5RHP9 1530 aa37.45■■■■□ 3.59
PSMD11-206ENST00000578213 MAGI1Q96QZ7 1491 aaPredicted RBP37.41■■■■□ 3.58
PSMD11-206ENST00000578213 SNAPC4Q5SXM2 1469 aa37.35■■■■□ 3.57
PSMD11-206ENST00000578213 ADAMTS12P58397 1594 aa37.29■■■■□ 3.56
PSMD11-206ENST00000578213 CUL7Q14999 1698 aa37.28■■■■□ 3.56
PSMD11-206ENST00000578213 CHD1O14646 1710 aa37.24■■■■□ 3.55
PSMD11-206ENST00000578213 SYNJ2O15056 1496 aa37.22■■■■□ 3.55
PSMD11-206ENST00000578213 EEA1Q15075 1411 aa37.22■■■■□ 3.55
PSMD11-206ENST00000578213 RUSC2Q8N2Y8 1516 aa37.2■■■■□ 3.55
PSMD11-206ENST00000578213 IGF1RP08069 1367 aa37.18■■■■□ 3.54
PSMD11-206ENST00000578213 FHAD1B1AJZ9 1412 aa37.18■■■■□ 3.54
PSMD11-206ENST00000578213 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
PSMD11-206ENST00000578213 CHMP7Q8WUX9 453 aaPredicted RBP37.03■■■■□ 3.52
PSMD11-206ENST00000578213 CARMIL1Q5VZK9 1371 aa37■■■■□ 3.51
PSMD11-206ENST00000578213 FBLN2P98095 1184 aa36.97■■■■□ 3.51
PSMD11-206ENST00000578213 PRXQ9BXM0 1461 aa36.91■■■■□ 3.5
PSMD11-206ENST00000578213 CSRNP3Q8WYN3 585 aa36.91■■■■□ 3.5
PSMD11-206ENST00000578213 RAPGEF2Q9Y4G8 1499 aa36.9■■■■□ 3.5
PSMD11-206ENST00000578213 OSCARQ8IYS5 282 aa36.9■■■■□ 3.5
PSMD11-206ENST00000578213 NUP160Q12769 1436 aa36.85■■■■□ 3.49
PSMD11-206ENST00000578213 CEP170Q5SW79 1584 aa36.83■■■■□ 3.49
PSMD11-206ENST00000578213 KIF21BO75037 1637 aa36.82■■■■□ 3.49
PSMD11-206ENST00000578213 CLASP1Q7Z460 1538 aa36.8■■■■□ 3.48
PSMD11-206ENST00000578213 FAM9AQ8IZU1 332 aaPredicted RBP36.78■■■■□ 3.48
PSMD11-206ENST00000578213 CTTNBP2Q8WZ74 1663 aa36.7■■■■□ 3.47
PSMD11-206ENST00000578213 KIAA0586Q9BVV6 1533 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms