RNA–Protein interactions for RNA: ENST00000570070.1

WDR59-222, Transcript of WD repeat domain 59, human

TSL 4

Gene WDR59, Length 565 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR59-222	ENST00000570070	NISCH	Q9Y2I1	1504 aa		26.65	■■□□□ 1.86
WDR59-222	ENST00000570070	CCDC180	Q9P1Z9	1646 aa		23.87	■■□□□ 1.41
WDR59-222	ENST00000570070	ABCC9	O60706	1549 aa		23.74	■■□□□ 1.39
WDR59-222	ENST00000570070	RB1CC1	Q8TDY2	1594 aa		22.63	■■□□□ 1.21
WDR59-222	ENST00000570070	DCAF8L2	P0C7V8	631 aa		22.57	■■□□□ 1.2
WDR59-222	ENST00000570070	NACAD	O15069	1562 aa		22.46	■■□□□ 1.19
WDR59-222	ENST00000570070	UNC13A	Q9UPW8	1703 aa		22.23	■■□□□ 1.15
WDR59-222	ENST00000570070	PABPN1	Q86U42	306 aa	Known RBP eCLIP	22.13	■■□□□ 1.13
WDR59-222	ENST00000570070	ZCCHC6	Q5VYS8	1495 aa	Known RBP	22.12	■■□□□ 1.13
WDR59-222	ENST00000570070	MYO15B	Q96JP2	1530 aa		22.11	■■□□□ 1.13
WDR59-222	ENST00000570070	DNAJC5B	Q9UF47	199 aa		22.03	■■□□□ 1.12
WDR59-222	ENST00000570070	BICRA	Q9NZM4	1560 aa		21.95	■■□□□ 1.11
WDR59-222	ENST00000570070	DCAF1	Q9Y4B6	1507 aa		21.94	■■□□□ 1.1
WDR59-222	ENST00000570070	SCRIB	Q14160	1630 aa		21.87	■■□□□ 1.09
WDR59-222	ENST00000570070	SHROOM4	Q9ULL8	1493 aa		21.55	■■□□□ 1.04
WDR59-222	ENST00000570070	CC2D2A	Q9P2K1	1620 aa		21.44	■■□□□ 1.02
WDR59-222	ENST00000570070	EIF4G1	Q04637	1599 aa	Known RBP	21.41	■■□□□ 1.02
WDR59-222	ENST00000570070	CECR2	Q9BXF3	1484 aa		21.32	■■□□□ 1
WDR59-222	ENST00000570070	SMARCA4	P51532	1647 aa		20.8	■□□□□ 0.92
WDR59-222	ENST00000570070	ATAD2B	Q9ULI0	1458 aa		20.71	■□□□□ 0.91
WDR59-222	ENST00000570070	NCAPD3	P42695	1498 aa		20.69	■□□□□ 0.9
WDR59-222	ENST00000570070	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	20.69	■□□□□ 0.9
WDR59-222	ENST00000570070	SMARCA2	P51531	1590 aa		20.68	■□□□□ 0.9
WDR59-222	ENST00000570070	HMGXB3	Q12766	1538 aa		20.61	■□□□□ 0.89
WDR59-222	ENST00000570070	MROH2B	Q7Z745	1585 aa		20.58	■□□□□ 0.88
WDR59-222	ENST00000570070	BAZ1B	Q9UIG0	1483 aa	Known RBP	20.57	■□□□□ 0.88
WDR59-222	ENST00000570070	PEG3	Q9GZU2	1588 aa		20.5	■□□□□ 0.87
WDR59-222	ENST00000570070	ERCC6	Q03468	1493 aa		20.49	■□□□□ 0.87
WDR59-222	ENST00000570070	NES	P48681	1621 aa		20.45	■□□□□ 0.87
WDR59-222	ENST00000570070	WIZ	O95785	1651 aa		20.42	■□□□□ 0.86
WDR59-222	ENST00000570070	CUX2	O14529	1486 aa		20.28	■□□□□ 0.84
WDR59-222	ENST00000570070	LAMC3	Q9Y6N6	1575 aa		20.27	■□□□□ 0.84
WDR59-222	ENST00000570070	KIF21A	Q7Z4S6	1674 aa		20.26	■□□□□ 0.83
WDR59-222	ENST00000570070	THOC2	Q8NI27	1593 aa	Known RBP	20.18	■□□□□ 0.82
WDR59-222	ENST00000570070	RSF1	Q96T23	1441 aa	Predicted RBP	20.18	■□□□□ 0.82
WDR59-222	ENST00000570070	PDS5B	Q9NTI5	1447 aa		20.12	■□□□□ 0.81
WDR59-222	ENST00000570070	CADPS	Q9ULU8	1353 aa		20.1	■□□□□ 0.81
WDR59-222	ENST00000570070	TOP2A	P11388	1531 aa	Known RBP	20.09	■□□□□ 0.81
WDR59-222	ENST00000570070	DNAJC5	Q9H3Z4	198 aa		20.04	■□□□□ 0.8
WDR59-222	ENST00000570070	MRC2	Q9UBG0	1479 aa		19.98	■□□□□ 0.79
WDR59-222	ENST00000570070	CEP164	Q9UPV0	1460 aa		19.95	■□□□□ 0.78
WDR59-222	ENST00000570070	FANCD2	Q9BXW9	1451 aa		19.93	■□□□□ 0.78
WDR59-222	ENST00000570070	CFTR	P13569	1480 aa		19.92	■□□□□ 0.78
WDR59-222	ENST00000570070	WDR62	O43379	1518 aa		19.9	■□□□□ 0.78
WDR59-222	ENST00000570070	PRDM2	Q13029	1718 aa		19.88	■□□□□ 0.77
WDR59-222	ENST00000570070	CCDC88B	A6NC98	1476 aa		19.86	■□□□□ 0.77
WDR59-222	ENST00000570070	URB2	Q14146	1524 aa	Known RBP	19.76	■□□□□ 0.75
WDR59-222	ENST00000570070	TOPBP1	Q92547	1522 aa		19.58	■□□□□ 0.73
WDR59-222	ENST00000570070	SUPT5H	O00267	1087 aa	Known RBP	19.57	■□□□□ 0.72
WDR59-222	ENST00000570070	DNMBP	Q6XZF7	1577 aa		19.53	■□□□□ 0.72
WDR59-222	ENST00000570070	ZNF608	Q9ULD9	1512 aa	Predicted RBP	19.51	■□□□□ 0.71
WDR59-222	ENST00000570070	IFT140	Q96RY7	1462 aa		19.5	■□□□□ 0.71
WDR59-222	ENST00000570070	ABCC8	Q09428	1581 aa		19.49	■□□□□ 0.71
WDR59-222	ENST00000570070	EIF4G3	O43432	1585 aa	Known RBP	19.44	■□□□□ 0.7
WDR59-222	ENST00000570070	OSCAR	Q8IYS5	282 aa		19.41	■□□□□ 0.7
WDR59-222	ENST00000570070	TRIM41	Q8WV44	630 aa		19.41	■□□□□ 0.7
WDR59-222	ENST00000570070	TARBP1	Q13395	1621 aa	Known RBP	19.4	■□□□□ 0.7
WDR59-222	ENST00000570070	POLA1	P09884	1462 aa	Predicted RBP	19.39	■□□□□ 0.69
WDR59-222	ENST00000570070	RAD54L2	Q9Y4B4	1467 aa		19.36	■□□□□ 0.69
WDR59-222	ENST00000570070	AQR	O60306	1485 aa	Known RBP eCLIP	19.35	■□□□□ 0.69
WDR59-222	ENST00000570070	CUX1	P39880	1505 aa		19.33	■□□□□ 0.68
WDR59-222	ENST00000570070	CHD1	O14646	1710 aa		19.33	■□□□□ 0.68
WDR59-222	ENST00000570070	FGD5	Q6ZNL6	1462 aa		19.33	■□□□□ 0.68
WDR59-222	ENST00000570070	SOGA1	O94964	1423 aa		19.3	■□□□□ 0.68
WDR59-222	ENST00000570070	TDRD9	Q8NDG6	1382 aa	Known RBP	19.27	■□□□□ 0.68
WDR59-222	ENST00000570070	FBLN2	P98095	1184 aa		19.26	■□□□□ 0.67
WDR59-222	ENST00000570070	RIMBP3C	A6NJZ7	1639 aa		19.22	■□□□□ 0.67
WDR59-222	ENST00000570070	RIMBP3B	A6NNM3	1639 aa		19.22	■□□□□ 0.67
WDR59-222	ENST00000570070	RIMBP3	Q9UFD9	1639 aa		19.22	■□□□□ 0.67
WDR59-222	ENST00000570070	WDR97	A6NE52	1622 aa		19.2	■□□□□ 0.66
WDR59-222	ENST00000570070	SNAPC4	Q5SXM2	1469 aa		19.17	■□□□□ 0.66
WDR59-222	ENST00000570070	PBRM1	Q86U86	1689 aa		19.17	■□□□□ 0.66
WDR59-222	ENST00000570070	ARHGEF11	O15085	1522 aa		19.14	■□□□□ 0.65
WDR59-222	ENST00000570070	GRIN2B	Q13224	1484 aa		19.09	■□□□□ 0.65
WDR59-222	ENST00000570070	SYNJ1	O43426	1573 aa		19.09	■□□□□ 0.65
WDR59-222	ENST00000570070	BIVM-ERCC5	R4GMW8	1640 aa		19.08	■□□□□ 0.65
WDR59-222	ENST00000570070	GAPVD1	Q14C86	1478 aa		19.08	■□□□□ 0.64
WDR59-222	ENST00000570070	CHMP7	Q8WUX9	453 aa	Predicted RBP	19.07	■□□□□ 0.64
WDR59-222	ENST00000570070	MAGI1	Q96QZ7	1491 aa	Predicted RBP	19.06	■□□□□ 0.64
WDR59-222	ENST00000570070	TOP2B	Q02880	1626 aa		19.06	■□□□□ 0.64
WDR59-222	ENST00000570070	ABCA5	Q8WWZ7	1642 aa		19.06	■□□□□ 0.64
WDR59-222	ENST00000570070	WRN	Q14191	1432 aa	Predicted RBP eCLIP	19.06	■□□□□ 0.64
WDR59-222	ENST00000570070	ABCA10	Q8WWZ4	1543 aa		19.05	■□□□□ 0.64
WDR59-222	ENST00000570070	SYNJ2	O15056	1496 aa		19.01	■□□□□ 0.63
WDR59-222	ENST00000570070	CYB5RL	Q6IPT4	315 aa		19	■□□□□ 0.63
WDR59-222	ENST00000570070	CLASP1	Q7Z460	1538 aa		18.98	■□□□□ 0.63
WDR59-222	ENST00000570070	ARAP1	Q96P48	1450 aa		18.96	■□□□□ 0.63
WDR59-222	ENST00000570070	ADAMTS12	P58397	1594 aa		18.92	■□□□□ 0.62
WDR59-222	ENST00000570070	GRIN2A	Q12879	1464 aa		18.87	■□□□□ 0.61
WDR59-222	ENST00000570070	CEP170	Q5SW79	1584 aa		18.83	■□□□□ 0.6
WDR59-222	ENST00000570070	ERICH3	Q5RHP9	1530 aa		18.83	■□□□□ 0.6
WDR59-222	ENST00000570070	FHAD1	B1AJZ9	1412 aa		18.81	■□□□□ 0.6
WDR59-222	ENST00000570070	TRH	P20396	242 aa	Predicted RBP	18.79	■□□□□ 0.6
WDR59-222	ENST00000570070	ERCC6L2	Q5T890	1561 aa		18.77	■□□□□ 0.6
WDR59-222	ENST00000570070	NUP160	Q12769	1436 aa		18.74	■□□□□ 0.59
WDR59-222	ENST00000570070	SHROOM2	Q13796	1616 aa		18.69	■□□□□ 0.58
WDR59-222	ENST00000570070	KIF27	Q86VH2	1401 aa		18.67	■□□□□ 0.58
WDR59-222	ENST00000570070	CUL7	Q14999	1698 aa		18.65	■□□□□ 0.58
WDR59-222	ENST00000570070	RUSC2	Q8N2Y8	1516 aa		18.64	■□□□□ 0.58
WDR59-222	ENST00000570070	PRG4	Q92954	1404 aa	Predicted RBP	18.62	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms