RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-209ENST00000580904 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
PSMD11-209ENST00000580904 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
PSMD11-209ENST00000580904 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
PSMD11-209ENST00000580904 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
PSMD11-209ENST00000580904 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
PSMD11-209ENST00000580904 FOXD1Q16676 465 aa19.43■□□□□ 0.7
PSMD11-209ENST00000580904 ADRA2BP18089 450 aa18.74■□□□□ 0.59
PSMD11-209ENST00000580904 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
PSMD11-209ENST00000580904 PIAS4Q8N2W9 510 aaPredicted RBP18.42■□□□□ 0.54
PSMD11-209ENST00000580904 MSH5O43196 834 aa18.05■□□□□ 0.48
PSMD11-209ENST00000580904 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
PSMD11-209ENST00000580904 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
PSMD11-209ENST00000580904 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
PSMD11-209ENST00000580904 KCNA4P22459 653 aa17.07■□□□□ 0.32
PSMD11-209ENST00000580904 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
PSMD11-209ENST00000580904 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
PSMD11-209ENST00000580904 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
PSMD11-209ENST00000580904 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
PSMD11-209ENST00000580904 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
PSMD11-209ENST00000580904 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
PSMD11-209ENST00000580904 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
PSMD11-209ENST00000580904 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
PSMD11-209ENST00000580904 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
PSMD11-209ENST00000580904 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
PSMD11-209ENST00000580904 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
PSMD11-209ENST00000580904 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
PSMD11-209ENST00000580904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.123e-6■■□□□ 13.6
PSMD11-209ENST00000580904 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
PSMD11-209ENST00000580904 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
PSMD11-209ENST00000580904 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
PSMD11-209ENST00000580904 ZBTB22O15209 634 aa15.62■□□□□ 0.09
PSMD11-209ENST00000580904 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
PSMD11-209ENST00000580904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
PSMD11-209ENST00000580904 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
PSMD11-209ENST00000580904 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
PSMD11-209ENST00000580904 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
PSMD11-209ENST00000580904 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
PSMD11-209ENST00000580904 APLP2Q06481 763 aa15.36■□□□□ 0.05
PSMD11-209ENST00000580904 ATXN8OSP0DMR3 200 aa15.29■□□□□ 0.04
PSMD11-209ENST00000580904 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
PSMD11-209ENST00000580904 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
PSMD11-209ENST00000580904 CAPN15O75808 1086 aa14.99□□□□□ -0.01
PSMD11-209ENST00000580904 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
PSMD11-209ENST00000580904 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
PSMD11-209ENST00000580904 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
PSMD11-209ENST00000580904 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
PSMD11-209ENST00000580904 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
PSMD11-209ENST00000580904 POLA2Q14181 598 aa14.69□□□□□ -0.06
PSMD11-209ENST00000580904 DSG3P32926 999 aa14.64□□□□□ -0.07
PSMD11-209ENST00000580904 ABCB7O75027 752 aa14.62□□□□□ -0.07
PSMD11-209ENST00000580904 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
PSMD11-209ENST00000580904 FBLN2P98095 1184 aa14.56□□□□□ -0.08
PSMD11-209ENST00000580904 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
PSMD11-209ENST00000580904 ABCC9O60706 1549 aa14.3□□□□□ -0.12
PSMD11-209ENST00000580904 FKBP8Q14318 412 aa14.25□□□□□ -0.13
PSMD11-209ENST00000580904 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
PSMD11-209ENST00000580904 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
PSMD11-209ENST00000580904 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
PSMD11-209ENST00000580904 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
PSMD11-209ENST00000580904 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
PSMD11-209ENST00000580904 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
PSMD11-209ENST00000580904 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
PSMD11-209ENST00000580904 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
PSMD11-209ENST00000580904 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
PSMD11-209ENST00000580904 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
PSMD11-209ENST00000580904 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
PSMD11-209ENST00000580904 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
PSMD11-209ENST00000580904 NACADO15069 1562 aa13.92□□□□□ -0.18
PSMD11-209ENST00000580904 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
PSMD11-209ENST00000580904 PROM2Q8N271 834 aa13.88□□□□□ -0.19
PSMD11-209ENST00000580904 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
PSMD11-209ENST00000580904 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
PSMD11-209ENST00000580904 PABPN1Q86U42 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
PSMD11-209ENST00000580904 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
PSMD11-209ENST00000580904 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
PSMD11-209ENST00000580904 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
PSMD11-209ENST00000580904 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
PSMD11-209ENST00000580904 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
PSMD11-209ENST00000580904 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
PSMD11-209ENST00000580904 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
PSMD11-209ENST00000580904 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
PSMD11-209ENST00000580904 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
PSMD11-209ENST00000580904 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
PSMD11-209ENST00000580904 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
PSMD11-209ENST00000580904 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
PSMD11-209ENST00000580904 MIER1Q8N108 512 aa13.48□□□□□ -0.25
PSMD11-209ENST00000580904 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
PSMD11-209ENST00000580904 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
PSMD11-209ENST00000580904 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
PSMD11-209ENST00000580904 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
PSMD11-209ENST00000580904 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
PSMD11-209ENST00000580904 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
PSMD11-209ENST00000580904 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
PSMD11-209ENST00000580904 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
PSMD11-209ENST00000580904 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
PSMD11-209ENST00000580904 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
PSMD11-209ENST00000580904 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
PSMD11-209ENST00000580904 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
PSMD11-209ENST00000580904 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
PSMD11-209ENST00000580904 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms